| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674671
Identifier: 75674671
GI number: 75674671
Start: 529921
End: 531411
Strand: Direct
Name: 75674671
Synonym: Nwi_0473
Alternate gene names: NA
Gene position: 529921-531411 (Clockwise)
Preceding gene: 75674670
Following gene: 75674672
Centisome position: 15.58
GC content: 67.07
Gene sequence:
>1491_bases ATGGCAGATGACAAGCATGACGACGCCTCCCAGGAGACAAACTCACGTCCGCTTTCCACAGGCGACGAAGAGACTGGAAC CTCCGAGGCGGCGGAGCGCGATGTTCAGGCAGACGCGGGTGAAACGGCCGGCGATCACCAAAGCGATGATTGGCCGTTTA CGACGCCTCCTGCTTCGGCCGCGGATGACCGGCAGGACGGTTTCTCTCAGGACGATTTCTCTCAGGACAGTGGCTGGCAG GATCAGTCCTCGGCCGCGAACCGCGAGACCGACCGGAATTCAGAGGCGGCGGGCGATGCCGGCTCTGGCGGCGGGTCCGG CGATCAACCGTCCGGCGAGCAGCCGGTTGCTCCGCGTTCTCCGTCCCGCGCGTCGTCGGCCCTGATCGCCGCCGTGAGCG GTGCCGCTGCCGCAGGGATTGTGGCTGGCGGCGCATGGCTGGCGGGTTGGCCGCCGCCATCCTCGGCTCCGCCCCCGGCG TCGCAAGTGAGCCAGGCGGAGCAGGTGAGCCAGGCGGAATTCAGCGCTCTCGCGAACCGGTTGGCCCGGATCGAATCGAC GGCGAGCCAGCCGGCCGCTTCGCCGCTCGATCAGGCCACGGCGGAACGCATCGAGACGCTGGACAAATCGGCCGCATCCT TGCGTGAGGACCTCACGACGTTGCGCGAGGAGTTGGCCTCGGTCCGGGGCCAGTCCGACAGGCTCGCCGCGGCGCTGAAG GACGGCGCGGCCGCGCCGAGGAACGATGGCGAAACGCCGTCTGATGTAGCTTCATCCGACCTTGCGCCTTCCGATCTCGC GGCTATCAGCGCGCGCCTCGCGCAGACCGAACAACAGATCGAGCAGATGACGCAGAGCCTCACGGCTGAGATAGCCAAGC GCGATGCGGAAACAGCCAGGCGTGACACGGAGTCAGCCAGGAACAGCGAGGAGACGGCCAAGTCCAAGCAGGCGGCCCCG GCCGACGACGGACCGCTTCGGCAGGCCGTTGCTGCGACGCTGCTGAACGTCGCCGTGCGTCAGGGGCAGCCTTATGGCGA TCTGTTGACGGCATTCAGGACGCTGGTCTCCGAGCCGGATACCTTGAAACCGCTGGAGACGTTCGCGGAGTCCGGAGTGC CGAGCGCGAACGCGTTGTGTCGCGAACTTCTTGCGATAGTGCCGAAACTCGAGCCGCCGCCGGTTAGGCTCTCCTCCGCC AACGACATCGTCAACCGGCTGCAGGAAAGCGCCGTGCGTCTGGTGCGAATCGAGCGCCTGGACACCGCGCCGGCCGGAGA ATCCGCCGGCGCCGTCGTCGCGCGCATCAAGGTGGCGGCCCGGCACAACGATGTCGCCACCGCGAGAAAAGAACTGAATA CGCTTCCGCCGACCGATCGTACCGCCGCGGAGTCCTGGATCGCCAAGGTCGACGCCCGCGATGCTGCTCTTGAAACTGCG CGTCAATTCGCTTCCGAAGCGATGGCCGCGCTGGCCAAACCGGCGCCATAG
Upstream 100 bases:
>100_bases CGTCGCAGTAAGACGTGCGTTACGGTCGTAATCGCGATAAACAGGGAGAAGGGGTCTCGAATCGATACTCGATGTGTCGC CGCAATGGGGAACCGTGACG
Downstream 100 bases:
>100_bases GTTCCAGATGTTGCGGATCATCCTATTTCTCGTTCTTATCGCTCTCTCTGCGCTGGGCGCCACCTGGATCGCCGATCAGA CCGGCACGATCGTTCTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASAADDRQDGFSQDDFSQDSGWQ DQSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRSPSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPA SQVSQAEQVSQAEFSALANRLARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALK DGAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETARRDTESARNSEETAKSKQAAP ADDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPDTLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSA NDIVNRLQESAVRLVRIERLDTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETA RQFASEAMAALAKPAP
Sequences:
>Translated_496_residues MADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASAADDRQDGFSQDDFSQDSGWQ DQSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRSPSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPA SQVSQAEQVSQAEFSALANRLARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALK DGAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETARRDTESARNSEETAKSKQAAP ADDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPDTLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSA NDIVNRLQESAVRLVRIERLDTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETA RQFASEAMAALAKPAP >Mature_495_residues ADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASAADDRQDGFSQDDFSQDSGWQD QSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRSPSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPAS QVSQAEQVSQAEFSALANRLARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALKD GAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETARRDTESARNSEETAKSKQAAPA DDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPDTLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSAN DIVNRLQESAVRLVRIERLDTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETAR QFASEAMAALAKPAP
Specific function: Unknown
COG id: COG4223
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51574; Mature: 51443
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASA CCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ADDRQDGFSQDDFSQDSGWQDQSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRS CCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPASQVSQAEQVSQAEFSALANR CCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALK HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH DGAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETAR HCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDTESARNSEETAKSKQAAPADDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPD HHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC TLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSANDIVNRLQESAVRLVRIERL CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RQFASEAMAALAKPAP HHHHHHHHHHHHCCCC >Mature Secondary Structure ADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASA CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ADDRQDGFSQDDFSQDSGWQDQSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRS CCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPASQVSQAEQVSQAEFSALANR CCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALK HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH DGAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETAR HCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDTESARNSEETAKSKQAAPADDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPD HHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC TLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSANDIVNRLQESAVRLVRIERL CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RQFASEAMAALAKPAP HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA