Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

Click here to switch to the map view.

The map label for this gene is 75674671

Identifier: 75674671

GI number: 75674671

Start: 529921

End: 531411

Strand: Direct

Name: 75674671

Synonym: Nwi_0473

Alternate gene names: NA

Gene position: 529921-531411 (Clockwise)

Preceding gene: 75674670

Following gene: 75674672

Centisome position: 15.58

GC content: 67.07

Gene sequence:

>1491_bases
ATGGCAGATGACAAGCATGACGACGCCTCCCAGGAGACAAACTCACGTCCGCTTTCCACAGGCGACGAAGAGACTGGAAC
CTCCGAGGCGGCGGAGCGCGATGTTCAGGCAGACGCGGGTGAAACGGCCGGCGATCACCAAAGCGATGATTGGCCGTTTA
CGACGCCTCCTGCTTCGGCCGCGGATGACCGGCAGGACGGTTTCTCTCAGGACGATTTCTCTCAGGACAGTGGCTGGCAG
GATCAGTCCTCGGCCGCGAACCGCGAGACCGACCGGAATTCAGAGGCGGCGGGCGATGCCGGCTCTGGCGGCGGGTCCGG
CGATCAACCGTCCGGCGAGCAGCCGGTTGCTCCGCGTTCTCCGTCCCGCGCGTCGTCGGCCCTGATCGCCGCCGTGAGCG
GTGCCGCTGCCGCAGGGATTGTGGCTGGCGGCGCATGGCTGGCGGGTTGGCCGCCGCCATCCTCGGCTCCGCCCCCGGCG
TCGCAAGTGAGCCAGGCGGAGCAGGTGAGCCAGGCGGAATTCAGCGCTCTCGCGAACCGGTTGGCCCGGATCGAATCGAC
GGCGAGCCAGCCGGCCGCTTCGCCGCTCGATCAGGCCACGGCGGAACGCATCGAGACGCTGGACAAATCGGCCGCATCCT
TGCGTGAGGACCTCACGACGTTGCGCGAGGAGTTGGCCTCGGTCCGGGGCCAGTCCGACAGGCTCGCCGCGGCGCTGAAG
GACGGCGCGGCCGCGCCGAGGAACGATGGCGAAACGCCGTCTGATGTAGCTTCATCCGACCTTGCGCCTTCCGATCTCGC
GGCTATCAGCGCGCGCCTCGCGCAGACCGAACAACAGATCGAGCAGATGACGCAGAGCCTCACGGCTGAGATAGCCAAGC
GCGATGCGGAAACAGCCAGGCGTGACACGGAGTCAGCCAGGAACAGCGAGGAGACGGCCAAGTCCAAGCAGGCGGCCCCG
GCCGACGACGGACCGCTTCGGCAGGCCGTTGCTGCGACGCTGCTGAACGTCGCCGTGCGTCAGGGGCAGCCTTATGGCGA
TCTGTTGACGGCATTCAGGACGCTGGTCTCCGAGCCGGATACCTTGAAACCGCTGGAGACGTTCGCGGAGTCCGGAGTGC
CGAGCGCGAACGCGTTGTGTCGCGAACTTCTTGCGATAGTGCCGAAACTCGAGCCGCCGCCGGTTAGGCTCTCCTCCGCC
AACGACATCGTCAACCGGCTGCAGGAAAGCGCCGTGCGTCTGGTGCGAATCGAGCGCCTGGACACCGCGCCGGCCGGAGA
ATCCGCCGGCGCCGTCGTCGCGCGCATCAAGGTGGCGGCCCGGCACAACGATGTCGCCACCGCGAGAAAAGAACTGAATA
CGCTTCCGCCGACCGATCGTACCGCCGCGGAGTCCTGGATCGCCAAGGTCGACGCCCGCGATGCTGCTCTTGAAACTGCG
CGTCAATTCGCTTCCGAAGCGATGGCCGCGCTGGCCAAACCGGCGCCATAG

Upstream 100 bases:

>100_bases
CGTCGCAGTAAGACGTGCGTTACGGTCGTAATCGCGATAAACAGGGAGAAGGGGTCTCGAATCGATACTCGATGTGTCGC
CGCAATGGGGAACCGTGACG

Downstream 100 bases:

>100_bases
GTTCCAGATGTTGCGGATCATCCTATTTCTCGTTCTTATCGCTCTCTCTGCGCTGGGCGCCACCTGGATCGCCGATCAGA
CCGGCACGATCGTTCTGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASAADDRQDGFSQDDFSQDSGWQ
DQSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRSPSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPA
SQVSQAEQVSQAEFSALANRLARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALK
DGAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETARRDTESARNSEETAKSKQAAP
ADDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPDTLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSA
NDIVNRLQESAVRLVRIERLDTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETA
RQFASEAMAALAKPAP

Sequences:

>Translated_496_residues
MADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASAADDRQDGFSQDDFSQDSGWQ
DQSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRSPSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPA
SQVSQAEQVSQAEFSALANRLARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALK
DGAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETARRDTESARNSEETAKSKQAAP
ADDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPDTLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSA
NDIVNRLQESAVRLVRIERLDTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETA
RQFASEAMAALAKPAP
>Mature_495_residues
ADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASAADDRQDGFSQDDFSQDSGWQD
QSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRSPSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPAS
QVSQAEQVSQAEFSALANRLARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALKD
GAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETARRDTESARNSEETAKSKQAAPA
DDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPDTLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSAN
DIVNRLQESAVRLVRIERLDTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETAR
QFASEAMAALAKPAP

Specific function: Unknown

COG id: COG4223

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51574; Mature: 51443

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASA
CCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ADDRQDGFSQDDFSQDSGWQDQSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRS
CCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPASQVSQAEQVSQAEFSALANR
CCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DGAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETAR
HCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDTESARNSEETAKSKQAAPADDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPD
HHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
TLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSANDIVNRLQESAVRLVRIERL
CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQFASEAMAALAKPAP
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADDKHDDASQETNSRPLSTGDEETGTSEAAERDVQADAGETAGDHQSDDWPFTTPPASA
CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ADDRQDGFSQDDFSQDSGWQDQSSAANRETDRNSEAAGDAGSGGGSGDQPSGEQPVAPRS
CCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSRASSALIAAVSGAAAAGIVAGGAWLAGWPPPSSAPPPASQVSQAEQVSQAEFSALANR
CCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARIESTASQPAASPLDQATAERIETLDKSAASLREDLTTLREELASVRGQSDRLAAALK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DGAAAPRNDGETPSDVASSDLAPSDLAAISARLAQTEQQIEQMTQSLTAEIAKRDAETAR
HCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDTESARNSEETAKSKQAAPADDGPLRQAVAATLLNVAVRQGQPYGDLLTAFRTLVSEPD
HHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
TLKPLETFAESGVPSANALCRELLAIVPKLEPPPVRLSSANDIVNRLQESAVRLVRIERL
CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DTAPAGESAGAVVARIKVAARHNDVATARKELNTLPPTDRTAAESWIAKVDARDAALETA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQFASEAMAALAKPAP
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA