| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674526
Identifier: 75674526
GI number: 75674526
Start: 366628
End: 368829
Strand: Direct
Name: 75674526
Synonym: Nwi_0328
Alternate gene names: NA
Gene position: 366628-368829 (Clockwise)
Preceding gene: 75674525
Following gene: 75674529
Centisome position: 10.78
GC content: 63.44
Gene sequence:
>2202_bases ATGATGGCGACAAAACGTGCGGCTCGAATGACGAGCGCGCCGTCCGAAGCTCTCTCGGAATCGCCTTTCTATATTCCGAT GACCGGGCCGTCGGCGCGTCCGCGCCGCACGCTTAAACACGATGACACCTTCGTCGTGCTGGACAGCCATGGTGATATCG GCGCTTCGGCGGGAGGCCCGGACGGGCTGTTCAATTCCGACACGCGATACCTCGCCCGGCTGGAGTTGCATCTCAACGAC ATGCAGCCGCTTCTGCTCGGCTCCAACCTGCGCAACGACAATTCCGGCCTCACGGTCGATCTCACCAATCCCGATATCTA TGACGGCGACCGGATCGTATTTCATAAGGATACGATCCATATCGTGCGCACGACCTTTCTCTGGCGGGGAACGGCGTATC AGAGGATCGGTTTGCAGAATCACGGCGAGCAGACTGCAAGCATCGCCCTCTCCCTCCGATTCGACAATGATTTCGCCGAC CTGTTCGAGGTTCGGGGCGAGCGCCGCGAGCGTCGCGGGACAGGCGCCAGCGAATTGGCAGATCCCGCCACCGTCGTTCT GTCCTACACTGGTGTCGACGACATCGTTCGGACCTCGCGCCTGCATTTCGCGCCACGGCCGACGCGGCTGACGGTCAACA GCGCGGTCTATCAGATCGATCTTCCCCCGCAGCAGACCACCGAAATCTTTCTCACCGTGTCCTGCAACAAGCCGGAGACG GAGAGGCCGGTTGCGTTCTACCGGGGCTTGCTGGCGCATCACCGTGAGATGCGGCGCGCCTGGTCTCATACGACGAGTAT CGAAACCTCGAACGACGTCTTCAACGAGGTGTTGTGCCAGTCGATGGCCGATCTGAATATCCTGATGACGCAGACGCCGC AGGGCCGCTATCCCTATGCCGGGATCCCCTGGTACTCGACCACGTTCGGGCGCGACGGCCTCATCACGGCCTTGCAGATG TTGTGGATCGACCCCGGCATCGCGCGCGGCGTTCTCCGGAGGCTTGCGGCCTTTCAGGCGAAAACCGTCGATCCTCTCGC GGATGCCGAGCCGGGAAAAATCCTTCACGAAATGCGCGGCGGCGAAATGGCGGCGCTGCGCGAAGTGCCTTTCGAACGCT ACTACGGCAGCGTCGATTCCACGCCGCTGTTCGTGCTGCTCGCAGGGCTTTACGTCGAACGTACGGGCGACGAGTCGATC CTGAAAGAGCTATGGCCGGCGATCGAGGCCGCGCTCGGCTGGATCGATGGCCCCGGCGATCCGGATGGCGACGGCTTTGT CGAATATCGGCGCGCATCCGAGCAGGGGCTCGCCAATCAAGGCTGGAAGGACTCGTTCGACGCCATCTTCCATGCCGATG GCACGCTTGCCGAGGGCAATATCGCGCTTGCGGAGGTGCAAGGTTACGTCTTCGCCGCCAAGCGGGCGGCGGCGCGGTGC GCGCGCGCGCTAGGCCTGACCGATCGGGCCGGTGAACTGGATCGCGCCGCGGAGCGTCTGGCGCGCCGGTTCGAGGAGAC GTTCTGGTTGCCGGATCTGGGGACCTACGCGCTGGCGCTGGACGGGGAAAAACGTCCCTGCCAAGTGCGGACGTCGAACG CCGGGCAATTGCTGTTCACCGGCATGGTCCGTGAAGATCGGGCGCGCCTGGTCGCCGCCGATCTGATGCGGCCTGCTTTC TTCACCGGATGGGGAATCCGCACCGTTGCTCTTGGGGAAGCGCGCTACAATCCGATGTCCTATCACAACGGCTCGATCTG GCCGCACGACAACGCGCTGATCGCGCTCGGGCTCGGGCGGTATGGCCTCAAGCACTCGGTGGAGCAGGTTTTCAAGGGGC TGTTCGATGCCGCTTCCTATATGGATTTGCGGCGGCTGCCGGAGCTGTTCTGCGGCTTCCGGCGTGAACCGCGGCGTGGG CCGACGCTTTATCCCGTCGCCTGTCTGCCGCAGGCATGGGCGAGCGCAACGCCGTTCACGCTGCTGGAAGCGGCGCTGGG CCTGGAGTTCGACCCCGCAAGGAGCGAGATCAGGCTGCGCAATCCACGGCTCCCGGCATTTCTCAACGAGATGATCCTGC GGCGTCTGCATCTTGGCGAATCCACCGTTGATCTGCGTCTGCGCCGGCATGATGAGGACGTGTCGGTTGAGGTGCTGCGG ACGCAAGGCCACGTCCAGGTATCGATGGTGCTGTCCCGTTAG
Upstream 100 bases:
>100_bases GAGATGAGCCGCCTTGCTGTTCACGCGGCTTGAACCCTGATCTCCGTCAGGCGTCGGGCGCTGGACGGAGCCGCATGATC AGGAATTCGGCAGGGGGTAG
Downstream 100 bases:
>100_bases GGCATGATCCAGACCCGAAGAGCCGCTTCAGCGCAAAGTGGAAACCGGTTTTCGGATAAGATCATGCTCAAGGAAAAAGA TAAGCGACGAGTCCCGTTCA
Product: amylo-alpha-1,6-glucosidase
Products: NA
Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Amylo-Alpha-1 6-Glucosidase Family Protein
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGPDGLFNSDTRYLARLELHLND MQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIHIVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFAD LFEVRGERRERRGTGASELADPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYAGIPWYSTTFGRDGLITALQM LWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRGGEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESI LKELWPAIEAALGWIDGPGDPDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFTGMVREDRARLVAADLMRPAF FTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGRYGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRG PTLYPVACLPQAWASATPFTLLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR TQGHVQVSMVLSR
Sequences:
>Translated_733_residues MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGPDGLFNSDTRYLARLELHLND MQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIHIVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFAD LFEVRGERRERRGTGASELADPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYAGIPWYSTTFGRDGLITALQM LWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRGGEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESI LKELWPAIEAALGWIDGPGDPDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFTGMVREDRARLVAADLMRPAF FTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGRYGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRG PTLYPVACLPQAWASATPFTLLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR TQGHVQVSMVLSR >Mature_733_residues MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGPDGLFNSDTRYLARLELHLND MQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIHIVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFAD LFEVRGERRERRGTGASELADPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYAGIPWYSTTFGRDGLITALQM LWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRGGEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESI LKELWPAIEAALGWIDGPGDPDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFTGMVREDRARLVAADLMRPAF FTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGRYGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRG PTLYPVACLPQAWASATPFTLLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR TQGHVQVSMVLSR
Specific function: Unknown
COG id: COG3408
COG function: function code G; Glycogen debranching enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81836; Mature: 81836
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGP CCCCHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC DGLFNSDTRYLARLELHLNDMQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIH CCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEE IVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFADLFEVRGERRERRGTGASELA EEEEHHEECCCHHEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHC DPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET CCEEEEEEECCHHHHHHHHHCCCCCCCCEEEEECEEEEEECCCCCCEEEEEEEECCCCCC ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC GIPWYSTTFGRDGLITALQMLWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRG CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC GEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESILKELWPAIEAALGWIDGPGD CCHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC PDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCEEEEECCCHHHHHHHHHHHH ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFT HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEE GMVREDRARLVAADLMRPAFFTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGR EHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC YGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRGPTLYPVACLPQAWASATPFT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHCCHHHCCCCCHH LLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR HHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE TQGHVQVSMVLSR CCCCEEEEEEECC >Mature Secondary Structure MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGP CCCCHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC DGLFNSDTRYLARLELHLNDMQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIH CCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEE IVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFADLFEVRGERRERRGTGASELA EEEEHHEECCCHHEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHC DPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET CCEEEEEEECCHHHHHHHHHCCCCCCCCEEEEECEEEEEECCCCCCEEEEEEEECCCCCC ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC GIPWYSTTFGRDGLITALQMLWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRG CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC GEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESILKELWPAIEAALGWIDGPGD CCHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC PDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCEEEEECCCHHHHHHHHHHHH ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFT HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEE GMVREDRARLVAADLMRPAFFTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGR EHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC YGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRGPTLYPVACLPQAWASATPFT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHCCHHHCCCCCHH LLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR HHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE TQGHVQVSMVLSR CCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA