Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75674526

Identifier: 75674526

GI number: 75674526

Start: 366628

End: 368829

Strand: Direct

Name: 75674526

Synonym: Nwi_0328

Alternate gene names: NA

Gene position: 366628-368829 (Clockwise)

Preceding gene: 75674525

Following gene: 75674529

Centisome position: 10.78

GC content: 63.44

Gene sequence:

>2202_bases
ATGATGGCGACAAAACGTGCGGCTCGAATGACGAGCGCGCCGTCCGAAGCTCTCTCGGAATCGCCTTTCTATATTCCGAT
GACCGGGCCGTCGGCGCGTCCGCGCCGCACGCTTAAACACGATGACACCTTCGTCGTGCTGGACAGCCATGGTGATATCG
GCGCTTCGGCGGGAGGCCCGGACGGGCTGTTCAATTCCGACACGCGATACCTCGCCCGGCTGGAGTTGCATCTCAACGAC
ATGCAGCCGCTTCTGCTCGGCTCCAACCTGCGCAACGACAATTCCGGCCTCACGGTCGATCTCACCAATCCCGATATCTA
TGACGGCGACCGGATCGTATTTCATAAGGATACGATCCATATCGTGCGCACGACCTTTCTCTGGCGGGGAACGGCGTATC
AGAGGATCGGTTTGCAGAATCACGGCGAGCAGACTGCAAGCATCGCCCTCTCCCTCCGATTCGACAATGATTTCGCCGAC
CTGTTCGAGGTTCGGGGCGAGCGCCGCGAGCGTCGCGGGACAGGCGCCAGCGAATTGGCAGATCCCGCCACCGTCGTTCT
GTCCTACACTGGTGTCGACGACATCGTTCGGACCTCGCGCCTGCATTTCGCGCCACGGCCGACGCGGCTGACGGTCAACA
GCGCGGTCTATCAGATCGATCTTCCCCCGCAGCAGACCACCGAAATCTTTCTCACCGTGTCCTGCAACAAGCCGGAGACG
GAGAGGCCGGTTGCGTTCTACCGGGGCTTGCTGGCGCATCACCGTGAGATGCGGCGCGCCTGGTCTCATACGACGAGTAT
CGAAACCTCGAACGACGTCTTCAACGAGGTGTTGTGCCAGTCGATGGCCGATCTGAATATCCTGATGACGCAGACGCCGC
AGGGCCGCTATCCCTATGCCGGGATCCCCTGGTACTCGACCACGTTCGGGCGCGACGGCCTCATCACGGCCTTGCAGATG
TTGTGGATCGACCCCGGCATCGCGCGCGGCGTTCTCCGGAGGCTTGCGGCCTTTCAGGCGAAAACCGTCGATCCTCTCGC
GGATGCCGAGCCGGGAAAAATCCTTCACGAAATGCGCGGCGGCGAAATGGCGGCGCTGCGCGAAGTGCCTTTCGAACGCT
ACTACGGCAGCGTCGATTCCACGCCGCTGTTCGTGCTGCTCGCAGGGCTTTACGTCGAACGTACGGGCGACGAGTCGATC
CTGAAAGAGCTATGGCCGGCGATCGAGGCCGCGCTCGGCTGGATCGATGGCCCCGGCGATCCGGATGGCGACGGCTTTGT
CGAATATCGGCGCGCATCCGAGCAGGGGCTCGCCAATCAAGGCTGGAAGGACTCGTTCGACGCCATCTTCCATGCCGATG
GCACGCTTGCCGAGGGCAATATCGCGCTTGCGGAGGTGCAAGGTTACGTCTTCGCCGCCAAGCGGGCGGCGGCGCGGTGC
GCGCGCGCGCTAGGCCTGACCGATCGGGCCGGTGAACTGGATCGCGCCGCGGAGCGTCTGGCGCGCCGGTTCGAGGAGAC
GTTCTGGTTGCCGGATCTGGGGACCTACGCGCTGGCGCTGGACGGGGAAAAACGTCCCTGCCAAGTGCGGACGTCGAACG
CCGGGCAATTGCTGTTCACCGGCATGGTCCGTGAAGATCGGGCGCGCCTGGTCGCCGCCGATCTGATGCGGCCTGCTTTC
TTCACCGGATGGGGAATCCGCACCGTTGCTCTTGGGGAAGCGCGCTACAATCCGATGTCCTATCACAACGGCTCGATCTG
GCCGCACGACAACGCGCTGATCGCGCTCGGGCTCGGGCGGTATGGCCTCAAGCACTCGGTGGAGCAGGTTTTCAAGGGGC
TGTTCGATGCCGCTTCCTATATGGATTTGCGGCGGCTGCCGGAGCTGTTCTGCGGCTTCCGGCGTGAACCGCGGCGTGGG
CCGACGCTTTATCCCGTCGCCTGTCTGCCGCAGGCATGGGCGAGCGCAACGCCGTTCACGCTGCTGGAAGCGGCGCTGGG
CCTGGAGTTCGACCCCGCAAGGAGCGAGATCAGGCTGCGCAATCCACGGCTCCCGGCATTTCTCAACGAGATGATCCTGC
GGCGTCTGCATCTTGGCGAATCCACCGTTGATCTGCGTCTGCGCCGGCATGATGAGGACGTGTCGGTTGAGGTGCTGCGG
ACGCAAGGCCACGTCCAGGTATCGATGGTGCTGTCCCGTTAG

Upstream 100 bases:

>100_bases
GAGATGAGCCGCCTTGCTGTTCACGCGGCTTGAACCCTGATCTCCGTCAGGCGTCGGGCGCTGGACGGAGCCGCATGATC
AGGAATTCGGCAGGGGGTAG

Downstream 100 bases:

>100_bases
GGCATGATCCAGACCCGAAGAGCCGCTTCAGCGCAAAGTGGAAACCGGTTTTCGGATAAGATCATGCTCAAGGAAAAAGA
TAAGCGACGAGTCCCGTTCA

Product: amylo-alpha-1,6-glucosidase

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 733; Mature: 733

Protein sequence:

>733_residues
MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGPDGLFNSDTRYLARLELHLND
MQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIHIVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFAD
LFEVRGERRERRGTGASELADPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET
ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYAGIPWYSTTFGRDGLITALQM
LWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRGGEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESI
LKELWPAIEAALGWIDGPGDPDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC
ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFTGMVREDRARLVAADLMRPAF
FTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGRYGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRG
PTLYPVACLPQAWASATPFTLLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR
TQGHVQVSMVLSR

Sequences:

>Translated_733_residues
MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGPDGLFNSDTRYLARLELHLND
MQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIHIVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFAD
LFEVRGERRERRGTGASELADPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET
ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYAGIPWYSTTFGRDGLITALQM
LWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRGGEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESI
LKELWPAIEAALGWIDGPGDPDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC
ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFTGMVREDRARLVAADLMRPAF
FTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGRYGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRG
PTLYPVACLPQAWASATPFTLLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR
TQGHVQVSMVLSR
>Mature_733_residues
MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGPDGLFNSDTRYLARLELHLND
MQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIHIVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFAD
LFEVRGERRERRGTGASELADPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET
ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYAGIPWYSTTFGRDGLITALQM
LWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRGGEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESI
LKELWPAIEAALGWIDGPGDPDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC
ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFTGMVREDRARLVAADLMRPAF
FTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGRYGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRG
PTLYPVACLPQAWASATPFTLLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR
TQGHVQVSMVLSR

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81836; Mature: 81836

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGP
CCCCHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
DGLFNSDTRYLARLELHLNDMQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIH
CCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEE
IVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFADLFEVRGERRERRGTGASELA
EEEEHHEECCCHHEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHC
DPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET
CCEEEEEEECCHHHHHHHHHCCCCCCCCEEEEECEEEEEECCCCCCEEEEEEEECCCCCC
ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
GIPWYSTTFGRDGLITALQMLWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRG
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC
GEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESILKELWPAIEAALGWIDGPGD
CCHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCEEEEECCCHHHHHHHHHHHH
ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFT
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEE
GMVREDRARLVAADLMRPAFFTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGR
EHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC
YGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRGPTLYPVACLPQAWASATPFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHCCHHHCCCCCHH
LLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR
HHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE
TQGHVQVSMVLSR
CCCCEEEEEEECC
>Mature Secondary Structure
MMATKRAARMTSAPSEALSESPFYIPMTGPSARPRRTLKHDDTFVVLDSHGDIGASAGGP
CCCCHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
DGLFNSDTRYLARLELHLNDMQPLLLGSNLRNDNSGLTVDLTNPDIYDGDRIVFHKDTIH
CCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEE
IVRTTFLWRGTAYQRIGLQNHGEQTASIALSLRFDNDFADLFEVRGERRERRGTGASELA
EEEEHHEECCCHHEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHC
DPATVVLSYTGVDDIVRTSRLHFAPRPTRLTVNSAVYQIDLPPQQTTEIFLTVSCNKPET
CCEEEEEEECCHHHHHHHHHCCCCCCCCEEEEECEEEEEECCCCCCEEEEEEEECCCCCC
ERPVAFYRGLLAHHREMRRAWSHTTSIETSNDVFNEVLCQSMADLNILMTQTPQGRYPYA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
GIPWYSTTFGRDGLITALQMLWIDPGIARGVLRRLAAFQAKTVDPLADAEPGKILHEMRG
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC
GEMAALREVPFERYYGSVDSTPLFVLLAGLYVERTGDESILKELWPAIEAALGWIDGPGD
CCHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDGDGFVEYRRASEQGLANQGWKDSFDAIFHADGTLAEGNIALAEVQGYVFAAKRAAARC
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCEEEEECCCHHHHHHHHHHHH
ARALGLTDRAGELDRAAERLARRFEETFWLPDLGTYALALDGEKRPCQVRTSNAGQLLFT
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEE
GMVREDRARLVAADLMRPAFFTGWGIRTVALGEARYNPMSYHNGSIWPHDNALIALGLGR
EHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC
YGLKHSVEQVFKGLFDAASYMDLRRLPELFCGFRREPRRGPTLYPVACLPQAWASATPFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHCCHHHCCCCCHH
LLEAALGLEFDPARSEIRLRNPRLPAFLNEMILRRLHLGESTVDLRLRRHDEDVSVEVLR
HHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE
TQGHVQVSMVLSR
CCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA