| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is 75674529
Identifier: 75674529
GI number: 75674529
Start: 372722
End: 373756
Strand: Direct
Name: 75674529
Synonym: Nwi_0331
Alternate gene names: NA
Gene position: 372722-373756 (Clockwise)
Preceding gene: 75674526
Following gene: 75674530
Centisome position: 10.96
GC content: 59.81
Gene sequence:
>1035_bases ATGAGCCTTGCCTTTTTGCTGCGAAGACTGACCGTCGCAATCGGGCTTGCGCTTGGCGTCGCCTCATCCGCCGCGGCCGA ACCGGCGCTGGACAGGGTCTCCTTTGGCACCAACTGGGTGGCGGAGGGTGAGCACGGCGGTTTCTTTCAAGCCCTGGCCG ACGGCACCTACAGAAAATTCGGTCTCGACGTGACCATCGTTCCGGGCGGCCCGAATGTGAACAACCGGGTTCTGCTGATC GCCGGCAAGCTCGACTTCTTCATGACCGCGAACACCCTTCAGTCGTTCGATGCGGTCGCCAACAACGTGCCGGTCGTGGC GGTGGCCGCGATGTTCCAGAAGGACCCGCAGGTTTTTCTCGCCCACCCGGAATCGAAGGTGACAACGATCGAGGACCTGA AGCCGCTTAATCTGTTCATCTCCAAGGAAGGCATCGCAAGCTACTTCCAGTGGCTCAAGTCCGAGTATGGATTCAGCGCC GGGAAGATCAGGCCTTACACGTTCAACGCGCAGCCTTTTCTGGCCGACAAGAAAAGCGCGATGCAGGGCTACGTGACATC CGAACCGTTCGCGGTGGAACGGCAGGCCGGCTTCAAGCCGACCGTGATCCTGCTCGCGGATGCCGGGTTCAATCCGTACT CGACCCTGATCGAGACACGCCGCGATCTGGTCGAGACCAAACAGGATCTGGTGCAGCGGTTCGTTGATGCCTCGATCATC GGCTGGTACACCTACCTCTACGGCGACAACACCGCCGGCAACGCCATGATCAAGAAGCTCAATCCCGAAATGACCGACGA CCTTCTGGCGTATTCGGTGGCGAAGATGAAAGAGCACGGCATCGTCGACTCGGGCGACTCCTTGCGCGACGGCATCGGCG CCATGACCGATGTGCGTTATGCTGGTCTGTTCGACCAGATGGTGCGGGCCGGCGTGGTGCGACGGGATCTCGATTACCGC AAGGCATACACCCTGCAATTCGTGAACAAGGGTGTCGGTCTGGATTTGCGACCCAGGAACTTGCAGATCAAGTGA
Upstream 100 bases:
>100_bases CGTTGTTTCAAGCGGCATGGACACCGTTTCGCGCCAAGGCGCGTTCAAATCAAAGCCATAATGCCCGCTTCATGGGCCAG AACGATCGAGGAGCCGAAGG
Downstream 100 bases:
>100_bases CGGAAGCCGCGTTACATGATCGATCACGCAATAGCGTCCTACCCATCCGGCGTGGGCCCGCGCGCCGGCGACGCGGTGAG CCTGAAAGGCGTTACCAAAC
Product: perplasmic binding protein of ABC transporter
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein; NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5 Like Family; Permease Protein Of ABC Transporter; Secreted Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; GGDEF Domain-Containing Protein; Histidine Kinase; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; ABC Transporter Permease; Diguanylate Cyclase; Lipoprotein
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSLAFLLRRLTVAIGLALGVASSAAAEPALDRVSFGTNWVAEGEHGGFFQALADGTYRKFGLDVTIVPGGPNVNNRVLLI AGKLDFFMTANTLQSFDAVANNVPVVAVAAMFQKDPQVFLAHPESKVTTIEDLKPLNLFISKEGIASYFQWLKSEYGFSA GKIRPYTFNAQPFLADKKSAMQGYVTSEPFAVERQAGFKPTVILLADAGFNPYSTLIETRRDLVETKQDLVQRFVDASII GWYTYLYGDNTAGNAMIKKLNPEMTDDLLAYSVAKMKEHGIVDSGDSLRDGIGAMTDVRYAGLFDQMVRAGVVRRDLDYR KAYTLQFVNKGVGLDLRPRNLQIK
Sequences:
>Translated_344_residues MSLAFLLRRLTVAIGLALGVASSAAAEPALDRVSFGTNWVAEGEHGGFFQALADGTYRKFGLDVTIVPGGPNVNNRVLLI AGKLDFFMTANTLQSFDAVANNVPVVAVAAMFQKDPQVFLAHPESKVTTIEDLKPLNLFISKEGIASYFQWLKSEYGFSA GKIRPYTFNAQPFLADKKSAMQGYVTSEPFAVERQAGFKPTVILLADAGFNPYSTLIETRRDLVETKQDLVQRFVDASII GWYTYLYGDNTAGNAMIKKLNPEMTDDLLAYSVAKMKEHGIVDSGDSLRDGIGAMTDVRYAGLFDQMVRAGVVRRDLDYR KAYTLQFVNKGVGLDLRPRNLQIK >Mature_343_residues SLAFLLRRLTVAIGLALGVASSAAAEPALDRVSFGTNWVAEGEHGGFFQALADGTYRKFGLDVTIVPGGPNVNNRVLLIA GKLDFFMTANTLQSFDAVANNVPVVAVAAMFQKDPQVFLAHPESKVTTIEDLKPLNLFISKEGIASYFQWLKSEYGFSAG KIRPYTFNAQPFLADKKSAMQGYVTSEPFAVERQAGFKPTVILLADAGFNPYSTLIETRRDLVETKQDLVQRFVDASIIG WYTYLYGDNTAGNAMIKKLNPEMTDDLLAYSVAKMKEHGIVDSGDSLRDGIGAMTDVRYAGLFDQMVRAGVVRRDLDYRK AYTLQFVNKGVGLDLRPRNLQIK
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37852; Mature: 37721
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAFLLRRLTVAIGLALGVASSAAAEPALDRVSFGTNWVAEGEHGGFFQALADGTYRKF CCHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCCCCEEECCCCCCHHHHHHCCCEEEE GLDVTIVPGGPNVNNRVLLIAGKLDFFMTANTLQSFDAVANNVPVVAVAAMFQKDPQVFL CCEEEEECCCCCCCCEEEEEEECCEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEE AHPESKVTTIEDLKPLNLFISKEGIASYFQWLKSEYGFSAGKIRPYTFNAQPFLADKKSA ECCCCCCCCHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHH MQGYVTSEPFAVERQAGFKPTVILLADAGFNPYSTLIETRRDLVETKQDLVQRFVDASII HCCCCCCCCEEEHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWYTYLYGDNTAGNAMIKKLNPEMTDDLLAYSVAKMKEHGIVDSGDSLRDGIGAMTDVRY EEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHH AGLFDQMVRAGVVRRDLDYRKAYTLQFVNKGVGLDLRPRNLQIK HHHHHHHHHHHHHHHCCCHHHHHHHEEHHCCCCCCCCCCCCCCC >Mature Secondary Structure SLAFLLRRLTVAIGLALGVASSAAAEPALDRVSFGTNWVAEGEHGGFFQALADGTYRKF CHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCCCCEEECCCCCCHHHHHHCCCEEEE GLDVTIVPGGPNVNNRVLLIAGKLDFFMTANTLQSFDAVANNVPVVAVAAMFQKDPQVFL CCEEEEECCCCCCCCEEEEEEECCEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEE AHPESKVTTIEDLKPLNLFISKEGIASYFQWLKSEYGFSAGKIRPYTFNAQPFLADKKSA ECCCCCCCCHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHH MQGYVTSEPFAVERQAGFKPTVILLADAGFNPYSTLIETRRDLVETKQDLVQRFVDASII HCCCCCCCCEEEHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWYTYLYGDNTAGNAMIKKLNPEMTDDLLAYSVAKMKEHGIVDSGDSLRDGIGAMTDVRY EEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHH AGLFDQMVRAGVVRRDLDYRKAYTLQFVNKGVGLDLRPRNLQIK HHHHHHHHHHHHHHHCCCHHHHHHHEEHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA