| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is hisD [H]
Identifier: 75674446
GI number: 75674446
Start: 276758
End: 278092
Strand: Direct
Name: hisD [H]
Synonym: Nwi_0247
Alternate gene names: 75674446
Gene position: 276758-278092 (Clockwise)
Preceding gene: 75674445
Following gene: 75674447
Centisome position: 8.13
GC content: 68.16
Gene sequence:
>1335_bases GTGACCCGTGATATTGTTCCACATCCGCCGGAAGCATCCCAGCCCATGCCGATCCGCATCGATAGCCGCAACGCCGATTT CGTCCCGCGCTTCAAGGCGTTTCTTGCGACCAAGCGCGAGGTCTCGGCCGATATCGAGGCGGCCACGCGCGCTATCGTCG ACGACGTGGCGGCGCGGGGCGATGCGGCGCTGATCGAGGCCACGTGCAAGTTCGACCGGCTGTCCGTCGACGCCGCGGGT CTCCGCTTCACCGCAGCCGAGATCGACGCCGCCGTGGCGGCTTGCGACGCCGCGACGCTGGACGCGCTGAAGCTGGCGCG CGACCGGATCGAGACCTTTCATCGCCGCCAGTTGCCAAAGGACGACCGTTTCATCGACGCGCTCGGCGTCGAACTCGGCT CGCGCTGGACCGCGATCGAGGCGGTCGGACTTTACGTGCCGGGCGGCTCCGCGGCCTATCCTTCCTCGGTGCTGATGAAT GCGGTGCCGGCTATGGTCGCCGGGGTCGCGCGCGTCGTCATGGTGGTGCCCTCGCCGGCGGGCAGGATCAATCCGCTGGT GCTGGCGGCGGCGCGGCTCGGCGGCGTCTCCGAAATCTATCGCGTGGGCGGCGCGCAGGCGGTCGCCGCACTCGCCTACG GCACCGCGACCATCGCGCCGGTGGCCAAGATTGTCGGACCCGGCAACGCCTATGTCGCCGCCGCCAAGCGGCAGGTGTTC GGCAAGGTCGGCATCGACATGATCGCCGGTCCCTCGGAGGTGCTTGTCATCGCCGACCAAACCGGCAACGCCGGCTGGAT CGCCGCCGATCTGCTCGCGCAGGCGGAGCATGACGCCAACGCGCAATCGATCCTGATCACCGACAGCGAGGCGCTCGCCG CCGATGTCGAGCGCGCCGTGGAGACGCAACTCGCAACGTTGCCGCGGGCCGGGATCGCGCGCGCCTCCTGGAACGACTTT GGCGCCGTCATTCTGGTGACGGATCTCGATGAAGCGGTGGTGCTGGCGGATTCGATCGCCGCGGAACATCTGGAGATCAT GACCGCCGATCCCGAAGGCCTCGCAGCGCGGATCCGTAATGCCGGCGCGATCTTTCTCGGGCCGCATACGCCGGAAGCCA TCGGCGATTATGTCGGCGGCTCCAATCACGTCCTGCCGACGGCACGCTCCGCGCGGTTTTCGTCGGGCCTTGGCGTGCTT GACTTCATGAAGCGAACGTCAATCCTCAAATGCGGGCCGGACCAGTTGCGGGCGCTGGGGCCGGCGGCGATGACCCTGGG CAAGGCCGAGGGCCTCGATGCCCATGCCCGTTCGGTCGGAGTGCGTCTCAACTAG
Upstream 100 bases:
>100_bases GCGCCGGATCGGGGTTGGTGCGAACCAATGGCGTTTTCGAGCGAAATGATCTCGAAGGGTTGACGGCGATTTGAGGTCGC GCCATTGAGCCGGTGTCCCT
Downstream 100 bases:
>100_bases AGCATTTTCCGGCGAAGTGGATGACCTGTTCGCCGCAAGAAAATGCGATCAGACAACCATTTCTAGAGCATGGTCCGATT CAACTTGATCGGATCATGCT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTRDIVPHPPEASQPMPIRIDSRNADFVPRFKAFLATKREVSADIEAATRAIVDDVAARGDAALIEATCKFDRLSVDAAG LRFTAAEIDAAVAACDAATLDALKLARDRIETFHRRQLPKDDRFIDALGVELGSRWTAIEAVGLYVPGGSAAYPSSVLMN AVPAMVAGVARVVMVVPSPAGRINPLVLAAARLGGVSEIYRVGGAQAVAALAYGTATIAPVAKIVGPGNAYVAAAKRQVF GKVGIDMIAGPSEVLVIADQTGNAGWIAADLLAQAEHDANAQSILITDSEALAADVERAVETQLATLPRAGIARASWNDF GAVILVTDLDEAVVLADSIAAEHLEIMTADPEGLAARIRNAGAIFLGPHTPEAIGDYVGGSNHVLPTARSARFSSGLGVL DFMKRTSILKCGPDQLRALGPAAMTLGKAEGLDAHARSVGVRLN
Sequences:
>Translated_444_residues MTRDIVPHPPEASQPMPIRIDSRNADFVPRFKAFLATKREVSADIEAATRAIVDDVAARGDAALIEATCKFDRLSVDAAG LRFTAAEIDAAVAACDAATLDALKLARDRIETFHRRQLPKDDRFIDALGVELGSRWTAIEAVGLYVPGGSAAYPSSVLMN AVPAMVAGVARVVMVVPSPAGRINPLVLAAARLGGVSEIYRVGGAQAVAALAYGTATIAPVAKIVGPGNAYVAAAKRQVF GKVGIDMIAGPSEVLVIADQTGNAGWIAADLLAQAEHDANAQSILITDSEALAADVERAVETQLATLPRAGIARASWNDF GAVILVTDLDEAVVLADSIAAEHLEIMTADPEGLAARIRNAGAIFLGPHTPEAIGDYVGGSNHVLPTARSARFSSGLGVL DFMKRTSILKCGPDQLRALGPAAMTLGKAEGLDAHARSVGVRLN >Mature_443_residues TRDIVPHPPEASQPMPIRIDSRNADFVPRFKAFLATKREVSADIEAATRAIVDDVAARGDAALIEATCKFDRLSVDAAGL RFTAAEIDAAVAACDAATLDALKLARDRIETFHRRQLPKDDRFIDALGVELGSRWTAIEAVGLYVPGGSAAYPSSVLMNA VPAMVAGVARVVMVVPSPAGRINPLVLAAARLGGVSEIYRVGGAQAVAALAYGTATIAPVAKIVGPGNAYVAAAKRQVFG KVGIDMIAGPSEVLVIADQTGNAGWIAADLLAQAEHDANAQSILITDSEALAADVERAVETQLATLPRAGIARASWNDFG AVILVTDLDEAVVLADSIAAEHLEIMTADPEGLAARIRNAGAIFLGPHTPEAIGDYVGGSNHVLPTARSARFSSGLGVLD FMKRTSILKCGPDQLRALGPAAMTLGKAEGLDAHARSVGVRLN
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=406, Percent_Identity=44.3349753694581, Blast_Score=285, Evalue=4e-78, Organism=Saccharomyces cerevisiae, GI6319819, Length=414, Percent_Identity=38.1642512077295, Blast_Score=256, Evalue=6e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46153; Mature: 46022
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRDIVPHPPEASQPMPIRIDSRNADFVPRFKAFLATKREVSADIEAATRAIVDDVAARG CCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAALIEATCKFDRLSVDAAGLRFTAAEIDAAVAACDAATLDALKLARDRIETFHRRQLPK CCEEEEEECCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDRFIDALGVELGSRWTAIEAVGLYVPGGSAAYPSSVLMNAVPAMVAGVARVVMVVPSPA CCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCC GRINPLVLAAARLGGVSEIYRVGGAQAVAALAYGTATIAPVAKIVGPGNAYVAAAKRQVF CCCCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCEEHHHHHHHH GKVGIDMIAGPSEVLVIADQTGNAGWIAADLLAQAEHDANAQSILITDSEALAADVERAV HHCCCCEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH ETQLATLPRAGIARASWNDFGAVILVTDLDEAVVLADSIAAEHLEIMTADPEGLAARIRN HHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEEEECCCHHHHHHHCC AGAIFLGPHTPEAIGDYVGGSNHVLPTARSARFSSGLGVLDFMKRTSILKCGPDQLRALG CCEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCHHHHHHCC PAAMTLGKAEGLDAHARSVGVRLN HHHHHHCCCCCCCCHHHCCCCCCC >Mature Secondary Structure TRDIVPHPPEASQPMPIRIDSRNADFVPRFKAFLATKREVSADIEAATRAIVDDVAARG CCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAALIEATCKFDRLSVDAAGLRFTAAEIDAAVAACDAATLDALKLARDRIETFHRRQLPK CCEEEEEECCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDRFIDALGVELGSRWTAIEAVGLYVPGGSAAYPSSVLMNAVPAMVAGVARVVMVVPSPA CCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCC GRINPLVLAAARLGGVSEIYRVGGAQAVAALAYGTATIAPVAKIVGPGNAYVAAAKRQVF CCCCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCEEHHHHHHHH GKVGIDMIAGPSEVLVIADQTGNAGWIAADLLAQAEHDANAQSILITDSEALAADVERAV HHCCCCEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH ETQLATLPRAGIARASWNDFGAVILVTDLDEAVVLADSIAAEHLEIMTADPEGLAARIRN HHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEEEECCCHHHHHHHCC AGAIFLGPHTPEAIGDYVGGSNHVLPTARSARFSSGLGVLDFMKRTSILKCGPDQLRALG CCEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCHHHHHHCC PAAMTLGKAEGLDAHARSVGVRLN HHHHHHCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA