| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674447
Identifier: 75674447
GI number: 75674447
Start: 278394
End: 278897
Strand: Direct
Name: 75674447
Synonym: Nwi_0248
Alternate gene names: NA
Gene position: 278394-278897 (Clockwise)
Preceding gene: 75674446
Following gene: 75674448
Centisome position: 8.18
GC content: 60.91
Gene sequence:
>504_bases ATGAGCAAGGAGACCCCATCCGAGGATGATTCTCGCCATCGAATCGTGGCGGTCACGCTCGATGAGGATTCGATCGGGCG CTCCGGACCTGATATCGAGCACGAGCGGGCGATCGCGATCTATGATCTCGTCGAAAAGAACCTGTTCGCACCGGAGGGTG CGGAAGGCGGCCCGTTCACCCTGCATATCGCGATCACCGGCAACCGCCTGATGTTCGACATCCGGCGCGAGGACGGCGCT CCCGTGGTGACACATCTGTTGTCGTTGACTCCGTTCCGGCGGATCGTGAAAGACTACTTCATGATCTGCGACAGCTACTA TCAGGCGATCCGGACCGCGACGCCAGACAAGATCGAGGCCATCGACATGGGCCGGCGCGGCATCCACGACGAAGGTTCGC GCACGCTGCAGGAGCGGCTGAACGGCAAGGTCCACGTTGATTTCGAGACCGCGCGGCGGCTGTTCACCTTGATCTCCGTT CTGCACTGGAAGGGTAACGCATGA
Upstream 100 bases:
>100_bases GAGGACATGCTTCGCTCGAAAACGCTATAGTGAAGGCAATCGCATTCGCTTCTCGCCGCGCCGAAATGGGATGCGAATGT TGGAACTGGACCGGTAGGCC
Downstream 100 bases:
>100_bases TCCGAAAGGCGGAACATCTGTTGCTGTCGCGATGCATGCGGAATGGCCGCGCGGAGGGCCCGCGCGAAACGAAAGCGGCT TGAGCCCATGGCCGCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFTLHIAITGNRLMFDIRREDGA PVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISV LHWKGNA
Sequences:
>Translated_167_residues MSKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFTLHIAITGNRLMFDIRREDGA PVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISV LHWKGNA >Mature_166_residues SKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFTLHIAITGNRLMFDIRREDGAP VVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISVL HWKGNA
Specific function: Unknown
COG id: COG5328
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0262 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y248_NITWN (Q3SW25)
Other databases:
- EMBL: CP000115 - RefSeq: YP_316868.1 - STRING: Q3SW25 - GeneID: 3674154 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_0248 - NMPDR: fig|323098.3.peg.718 - eggNOG: COG5328 - HOGENOM: HBG294171 - OMA: IDMARRG - ProtClustDB: PRK02853 - BioCyc: NWIN323098:NWI_0248-MONOMER - HAMAP: MF_00678 - InterPro: IPR008321 - PIRSF: PIRSF032146
Pfam domain/function: PF06793 UPF0262
EC number: NA
Molecular weight: Translated: 18920; Mature: 18788
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFT CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEE LHIAITGNRLMFDIRREDGAPVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEA EEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISVLHWKGNA HHCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFT CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEE LHIAITGNRLMFDIRREDGAPVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEA EEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISVLHWKGNA HHCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA