Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75674447

Identifier: 75674447

GI number: 75674447

Start: 278394

End: 278897

Strand: Direct

Name: 75674447

Synonym: Nwi_0248

Alternate gene names: NA

Gene position: 278394-278897 (Clockwise)

Preceding gene: 75674446

Following gene: 75674448

Centisome position: 8.18

GC content: 60.91

Gene sequence:

>504_bases
ATGAGCAAGGAGACCCCATCCGAGGATGATTCTCGCCATCGAATCGTGGCGGTCACGCTCGATGAGGATTCGATCGGGCG
CTCCGGACCTGATATCGAGCACGAGCGGGCGATCGCGATCTATGATCTCGTCGAAAAGAACCTGTTCGCACCGGAGGGTG
CGGAAGGCGGCCCGTTCACCCTGCATATCGCGATCACCGGCAACCGCCTGATGTTCGACATCCGGCGCGAGGACGGCGCT
CCCGTGGTGACACATCTGTTGTCGTTGACTCCGTTCCGGCGGATCGTGAAAGACTACTTCATGATCTGCGACAGCTACTA
TCAGGCGATCCGGACCGCGACGCCAGACAAGATCGAGGCCATCGACATGGGCCGGCGCGGCATCCACGACGAAGGTTCGC
GCACGCTGCAGGAGCGGCTGAACGGCAAGGTCCACGTTGATTTCGAGACCGCGCGGCGGCTGTTCACCTTGATCTCCGTT
CTGCACTGGAAGGGTAACGCATGA

Upstream 100 bases:

>100_bases
GAGGACATGCTTCGCTCGAAAACGCTATAGTGAAGGCAATCGCATTCGCTTCTCGCCGCGCCGAAATGGGATGCGAATGT
TGGAACTGGACCGGTAGGCC

Downstream 100 bases:

>100_bases
TCCGAAAGGCGGAACATCTGTTGCTGTCGCGATGCATGCGGAATGGCCGCGCGGAGGGCCCGCGCGAAACGAAAGCGGCT
TGAGCCCATGGCCGCGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFTLHIAITGNRLMFDIRREDGA
PVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISV
LHWKGNA

Sequences:

>Translated_167_residues
MSKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFTLHIAITGNRLMFDIRREDGA
PVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISV
LHWKGNA
>Mature_166_residues
SKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFTLHIAITGNRLMFDIRREDGAP
VVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISVL
HWKGNA

Specific function: Unknown

COG id: COG5328

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0262 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y248_NITWN (Q3SW25)

Other databases:

- EMBL:   CP000115
- RefSeq:   YP_316868.1
- STRING:   Q3SW25
- GeneID:   3674154
- GenomeReviews:   CP000115_GR
- KEGG:   nwi:Nwi_0248
- NMPDR:   fig|323098.3.peg.718
- eggNOG:   COG5328
- HOGENOM:   HBG294171
- OMA:   IDMARRG
- ProtClustDB:   PRK02853
- BioCyc:   NWIN323098:NWI_0248-MONOMER
- HAMAP:   MF_00678
- InterPro:   IPR008321
- PIRSF:   PIRSF032146

Pfam domain/function: PF06793 UPF0262

EC number: NA

Molecular weight: Translated: 18920; Mature: 18788

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFT
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEE
LHIAITGNRLMFDIRREDGAPVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEA
EEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISVLHWKGNA
HHCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKETPSEDDSRHRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEGGPFT
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEE
LHIAITGNRLMFDIRREDGAPVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEA
EEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IDMGRRGIHDEGSRTLQERLNGKVHVDFETARRLFTLISVLHWKGNA
HHCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA