| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318798
Identifier: 74318798
GI number: 74318798
Start: 2859927
End: 2860748
Strand: Direct
Name: 74318798
Synonym: Tbd_2780
Alternate gene names: NA
Gene position: 2859927-2860748 (Clockwise)
Preceding gene: 74318797
Following gene: 74318799
Centisome position: 98.29
GC content: 68.98
Gene sequence:
>822_bases GTGAAAACCTTTCTCGTCAGCTTGTTCGCGGTATTTCTGACCTTCGCTCTCGGCGCCCACGACGCCGAGGCCAAACGCCT CGGTGGCGGCAAATCCTTCGGCATGCAGCGCACGGCGCCGACCAAGCAGGAAGCCGCACCGCAACGCCAGCAGCCCGCCG GCAGCCCGCCCCAGGCCGCGCCGCAGAAGCGTAGCTGGATGGGGCCGATCGCCGGTCTCGCCGCAGGCCTCGGCCTCGCT GCGCTCGCTTCGCATCTCGGCTTCGGCGAGGAAATGGCCAACTTCCTGATGCTGGCGCTGCTGGCGATGGCGGCTTTCAT GCTGTTCCGTTTCTTCATGCGTCGCAACGCGCCGCAACCCGCGATGCAGTACGCGGGGGTCCCGCCCGGCCACAACCCGC GCCTCCACGACGCGACCCCGGCTGGCGCGACCGCCGGCCCCGCGACCGGCTTCCCGCCGGGTTTCGACGCGGCGGGTTTC GCGCGCGAAGCGAAGCTCAATTTCATCCGCCTGCAGGCGGCCTTCGACGCGGGCAACCTCGACGACCTGCGCGCCTTCAC CTCGCCCGAGATCTTCGCCGAGCTGTCGATGCAGATGGCCGAGCGCGGCGACGTCCAACAGACCACCGACGTGATGATGC TGGACGCCGAAGTGCTCGAGGCCAGCGACGAGGACAACCGCCACGTCGTCAGCGTGCGCTTCACCGGTCAGGTGCGCGAG AATGAAGGCGCTGCGCCGGTCGCGCTCGACGAGGTCTGGCACCTCACCAAGCCCATTCACGGCGGTGGCGGCTGGGTGAT CGCCGGCATACAGCAGGGGTGA
Upstream 100 bases:
>100_bases CGATCGAAAATTTCGAATGGTCCGCGTATAAAAAACGACTTTCCAATACGCCGGGCAGGTCCCACCATACCGGGTCTCGT CGACCCCACGGAGTCTCCTC
Downstream 100 bases:
>100_bases GAAAGCGCCGGGGCAGCCGGCCCGGCGCGGCAACCGCTTCGCAGGCCGCCCCGCGCGGAATAGAAGCGGCGACTTATGCA CATTTTCCGGGCACCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Tim44 Domain Protein; Hypothtical Protein; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKTFLVSLFAVFLTFALGAHDAEAKRLGGGKSFGMQRTAPTKQEAAPQRQQPAGSPPQAAPQKRSWMGPIAGLAAGLGLA ALASHLGFGEEMANFLMLALLAMAAFMLFRFFMRRNAPQPAMQYAGVPPGHNPRLHDATPAGATAGPATGFPPGFDAAGF AREAKLNFIRLQAAFDAGNLDDLRAFTSPEIFAELSMQMAERGDVQQTTDVMMLDAEVLEASDEDNRHVVSVRFTGQVRE NEGAAPVALDEVWHLTKPIHGGGGWVIAGIQQG
Sequences:
>Translated_273_residues MKTFLVSLFAVFLTFALGAHDAEAKRLGGGKSFGMQRTAPTKQEAAPQRQQPAGSPPQAAPQKRSWMGPIAGLAAGLGLA ALASHLGFGEEMANFLMLALLAMAAFMLFRFFMRRNAPQPAMQYAGVPPGHNPRLHDATPAGATAGPATGFPPGFDAAGF AREAKLNFIRLQAAFDAGNLDDLRAFTSPEIFAELSMQMAERGDVQQTTDVMMLDAEVLEASDEDNRHVVSVRFTGQVRE NEGAAPVALDEVWHLTKPIHGGGGWVIAGIQQG >Mature_273_residues MKTFLVSLFAVFLTFALGAHDAEAKRLGGGKSFGMQRTAPTKQEAAPQRQQPAGSPPQAAPQKRSWMGPIAGLAAGLGLA ALASHLGFGEEMANFLMLALLAMAAFMLFRFFMRRNAPQPAMQYAGVPPGHNPRLHDATPAGATAGPATGFPPGFDAAGF AREAKLNFIRLQAAFDAGNLDDLRAFTSPEIFAELSMQMAERGDVQQTTDVMMLDAEVLEASDEDNRHVVSVRFTGQVRE NEGAAPVALDEVWHLTKPIHGGGGWVIAGIQQG
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29043; Mature: 29043
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFLVSLFAVFLTFALGAHDAEAKRLGGGKSFGMQRTAPTKQEAAPQRQQPAGSPPQAA CHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC PQKRSWMGPIAGLAAGLGLAALASHLGFGEEMANFLMLALLAMAAFMLFRFFMRRNAPQP CCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AMQYAGVPPGHNPRLHDATPAGATAGPATGFPPGFDAAGFAREAKLNFIRLQAAFDAGNL HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEEEECCCCCH DDLRAFTSPEIFAELSMQMAERGDVQQTTDVMMLDAEVLEASDEDNRHVVSVRFTGQVRE HHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECEEEC NEGAAPVALDEVWHLTKPIHGGGGWVIAGIQQG CCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCC >Mature Secondary Structure MKTFLVSLFAVFLTFALGAHDAEAKRLGGGKSFGMQRTAPTKQEAAPQRQQPAGSPPQAA CHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC PQKRSWMGPIAGLAAGLGLAALASHLGFGEEMANFLMLALLAMAAFMLFRFFMRRNAPQP CCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AMQYAGVPPGHNPRLHDATPAGATAGPATGFPPGFDAAGFAREAKLNFIRLQAAFDAGNL HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEEEECCCCCH DDLRAFTSPEIFAELSMQMAERGDVQQTTDVMMLDAEVLEASDEDNRHVVSVRFTGQVRE HHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECEEEC NEGAAPVALDEVWHLTKPIHGGGGWVIAGIQQG CCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA