| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318763
Identifier: 74318763
GI number: 74318763
Start: 2824993
End: 2825652
Strand: Direct
Name: 74318763
Synonym: Tbd_2745
Alternate gene names: NA
Gene position: 2824993-2825652 (Clockwise)
Preceding gene: 74318762
Following gene: 74318764
Centisome position: 97.09
GC content: 69.85
Gene sequence:
>660_bases ATGAGGATCACGCCGGCCCGCGCCGCGCGCGGCGTCGCCATCGCGGGCGCGGTGATCGGCTACCCGGTGGCCGCGCACTA CAGCACGACCGTGCCGGCCGCGCCGGCCGCGCTAGGCGTCGCGGTGTCGCTGCTGCCGTCGCTGCTGATTCTCGTGGCCC TCGCGTGGCGTTCGCCGCGGCGCGGTGCGGCGCTGCTCGTCTGCGGAGCGGTCGCGGCGCTGCTGTGGGGCTTCTGGGGC GCGCTCGAGCGCAATTTCAACTGGGTCTATTTCCTGCAGCACGCGGGCACCAACGTCATGCTTGCGCTGGCCTTCGGCGC GACGCTCGCGCGCGGGCGAAAGGCCTTGTGCACCCACTTCGCCGAAGCCGTGCACGGCGGCGCGCTCACGCCCGAGGTGC TGCGCTATACCCGCCAGGTCACCGCGGCCTGGACGCTGTTCTTCGTCGCGCTGAGCGTCGTTTCGAGCGTGCTTTTCTTC TTTTTCAGCATCGAGGCCTGGTCGGTCTTCGCCAACTTCCTGACCCTGCCGCTGGTGTTGCTGATGTTCGCGGCCGAATA CGGCGTGCGGGTGCTCAAGCTGCCGAAGGTCGAACGCCACGGCATCCTGGACGGCATCCTCGCTTTCTGGAAAACGCCGC CGGGCACGTCCCCGCGCTGA
Upstream 100 bases:
>100_bases AACGCTACGGCTTCCAGTTGCGCGCGGACAACGCGGACAACGTCCGCATCTTCAGTTCGCTCGCCAACCTGACCCGGCAC ATCGCGGCGAATCGCAGCAA
Downstream 100 bases:
>100_bases GCGCCCCGACGCGATGCCGAGCCTGCCGCTTGTCGCCCACCGCCCCGACGCCGTTGTGGCATGGCGCGGCGCCACGCCGG TCACGGCCGCGCAGTTTGCC
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MRITPARAARGVAIAGAVIGYPVAAHYSTTVPAAPAALGVAVSLLPSLLILVALAWRSPRRGAALLVCGAVAALLWGFWG ALERNFNWVYFLQHAGTNVMLALAFGATLARGRKALCTHFAEAVHGGALTPEVLRYTRQVTAAWTLFFVALSVVSSVLFF FFSIEAWSVFANFLTLPLVLLMFAAEYGVRVLKLPKVERHGILDGILAFWKTPPGTSPR
Sequences:
>Translated_219_residues MRITPARAARGVAIAGAVIGYPVAAHYSTTVPAAPAALGVAVSLLPSLLILVALAWRSPRRGAALLVCGAVAALLWGFWG ALERNFNWVYFLQHAGTNVMLALAFGATLARGRKALCTHFAEAVHGGALTPEVLRYTRQVTAAWTLFFVALSVVSSVLFF FFSIEAWSVFANFLTLPLVLLMFAAEYGVRVLKLPKVERHGILDGILAFWKTPPGTSPR >Mature_219_residues MRITPARAARGVAIAGAVIGYPVAAHYSTTVPAAPAALGVAVSLLPSLLILVALAWRSPRRGAALLVCGAVAALLWGFWG ALERNFNWVYFLQHAGTNVMLALAFGATLARGRKALCTHFAEAVHGGALTPEVLRYTRQVTAAWTLFFVALSVVSSVLFF FFSIEAWSVFANFLTLPLVLLMFAAEYGVRVLKLPKVERHGILDGILAFWKTPPGTSPR
Specific function: Unknown
COG id: COG4648
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23534; Mature: 23534
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITPARAARGVAIAGAVIGYPVAAHYSTTVPAAPAALGVAVSLLPSLLILVALAWRSPR CCCCHHHHHCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RGAALLVCGAVAALLWGFWGALERNFNWVYFLQHAGTNVMLALAFGATLARGRKALCTHF CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH AEAVHGGALTPEVLRYTRQVTAAWTLFFVALSVVSSVLFFFFSIEAWSVFANFLTLPLVL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMFAAEYGVRVLKLPKVERHGILDGILAFWKTPPGTSPR HHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRITPARAARGVAIAGAVIGYPVAAHYSTTVPAAPAALGVAVSLLPSLLILVALAWRSPR CCCCHHHHHCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RGAALLVCGAVAALLWGFWGALERNFNWVYFLQHAGTNVMLALAFGATLARGRKALCTHF CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH AEAVHGGALTPEVLRYTRQVTAAWTLFFVALSVVSSVLFFFFSIEAWSVFANFLTLPLVL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMFAAEYGVRVLKLPKVERHGILDGILAFWKTPPGTSPR HHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA