| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318718
Identifier: 74318718
GI number: 74318718
Start: 2782628
End: 2783302
Strand: Direct
Name: 74318718
Synonym: Tbd_2700
Alternate gene names: NA
Gene position: 2782628-2783302 (Clockwise)
Preceding gene: 74318717
Following gene: 74318720
Centisome position: 95.63
GC content: 64.44
Gene sequence:
>675_bases ATGCTCAAAAACTTCATGCAACCAGGGACCGGGACCGGTTCGAATTCATCCGGTTCGAATTCATCCTCGAACTCGTCCGG CGTTGACGCCACGCGGATGGTTCACTCGGGCTACCCGTCCAAACCCACCGACTCGATCCGCACGTCCGACGCGCCGAAGC AGGACACGACCAACACGCGGAAGGCAGGATCGAACGACGAAGGCAGCAAGCTGATCGTGGGGCCCAACATCACGCTCAAG GGCTCCGAAATCACCGATTGCGACATTCTCTTGGTCGAAGGACGGGTGGAGGCTTCCATGAACAGCCGTGACATTCGCAT CGCGGAAAGCGGGGTTTTCTCGGGCAAGGCGGAAATCGACGTCGCCGAGGTTCGCGGCCAGTTCGAGGGGGAGCTGACGG CGCGCAAGCGCCTCGTCGTCTACGCCACGGGGCGCGTCAGCGGCGTGATCCGCTACGGCGCGATGATGGTCGAGGAAGGC GGCGTCATTTCCGGCAACGTCGCGATGCTCGAAGACCCGAGCGACCTGGCCCCGGCCGCCGAGGCGACGGAAGCGGTCGC GGAAGCAGCACCGGAGCCCGCTCCGGAAGCGGCCGCCGAGAAGAAAACCGATCTCGAGGAAATCCTGTTCCACTCCACGG TGGCGCGCGCCGGACTGGGCAAGCGACGCGCCTGA
Upstream 100 bases:
>100_bases TTCTCTGGCTCAGCTCTTGCTAAGTGAGGCGTTTGCGCCGCATGGCGCGCTGTTGCCGTAGCAGGCGTTTCTGTTAGCAG CTCACGGAGGAGAAGACCCG
Downstream 100 bases:
>100_bases CTACGTCCCGCGCGAGGCTCCGCGGCGTCCTCTACGGTCGCTGGGACCCCGTGTCACCTTGGCAGTGCCACCCTCCCCGT TGCCCGTGGCGACTGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MLKNFMQPGTGTGSNSSGSNSSSNSSGVDATRMVHSGYPSKPTDSIRTSDAPKQDTTNTRKAGSNDEGSKLIVGPNITLK GSEITDCDILLVEGRVEASMNSRDIRIAESGVFSGKAEIDVAEVRGQFEGELTARKRLVVYATGRVSGVIRYGAMMVEEG GVISGNVAMLEDPSDLAPAAEATEAVAEAAPEPAPEAAAEKKTDLEEILFHSTVARAGLGKRRA
Sequences:
>Translated_224_residues MLKNFMQPGTGTGSNSSGSNSSSNSSGVDATRMVHSGYPSKPTDSIRTSDAPKQDTTNTRKAGSNDEGSKLIVGPNITLK GSEITDCDILLVEGRVEASMNSRDIRIAESGVFSGKAEIDVAEVRGQFEGELTARKRLVVYATGRVSGVIRYGAMMVEEG GVISGNVAMLEDPSDLAPAAEATEAVAEAAPEPAPEAAAEKKTDLEEILFHSTVARAGLGKRRA >Mature_224_residues MLKNFMQPGTGTGSNSSGSNSSSNSSGVDATRMVHSGYPSKPTDSIRTSDAPKQDTTNTRKAGSNDEGSKLIVGPNITLK GSEITDCDILLVEGRVEASMNSRDIRIAESGVFSGKAEIDVAEVRGQFEGELTARKRLVVYATGRVSGVIRYGAMMVEEG GVISGNVAMLEDPSDLAPAAEATEAVAEAAPEPAPEAAAEKKTDLEEILFHSTVARAGLGKRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23389; Mature: 23389
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNFMQPGTGTGSNSSGSNSSSNSSGVDATRMVHSGYPSKPTDSIRTSDAPKQDTTNTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KAGSNDEGSKLIVGPNITLKGSEITDCDILLVEGRVEASMNSRDIRIAESGVFSGKAEID CCCCCCCCCEEEECCCEEECCCCCCCEEEEEECCEEECCCCCCEEEEECCCCCCCCCEEE VAEVRGQFEGELTARKRLVVYATGRVSGVIRYGAMMVEEGGVISGNVAMLEDPSDLAPAA HHHHCCCCCCCEEECEEEEEEECCCHHHHHHHCEEEEECCCEEECCEEEEECCHHHCCHH EATEAVAEAAPEPAPEAAAEKKTDLEEILFHSTVARAGLGKRRA HHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLKNFMQPGTGTGSNSSGSNSSSNSSGVDATRMVHSGYPSKPTDSIRTSDAPKQDTTNTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KAGSNDEGSKLIVGPNITLKGSEITDCDILLVEGRVEASMNSRDIRIAESGVFSGKAEID CCCCCCCCCEEEECCCEEECCCCCCCEEEEEECCEEECCCCCCEEEEECCCCCCCCCEEE VAEVRGQFEGELTARKRLVVYATGRVSGVIRYGAMMVEEGGVISGNVAMLEDPSDLAPAA HHHHCCCCCCCEEECEEEEEEECCCHHHHHHHCEEEEECCCEEECCEEEEECCHHHCCHH EATEAVAEAAPEPAPEAAAEKKTDLEEILFHSTVARAGLGKRRA HHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA