Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318720

Identifier: 74318720

GI number: 74318720

Start: 2784191

End: 2785345

Strand: Direct

Name: 74318720

Synonym: Tbd_2702

Alternate gene names: NA

Gene position: 2784191-2785345 (Clockwise)

Preceding gene: 74318718

Following gene: 74318740

Centisome position: 95.68

GC content: 70.48

Gene sequence:

>1155_bases
ATGAACTCGATGCTGCCCGTCCCCAGTCCCGACGCGCTTGCGCACAGCCGGCGCGTCGTCACCCATGTGCACGCGTTGCT
CGACGCGGCCGGCGGCTGGATACCGTTTTCACGCTTCATGCAAGCCGTCCTGTACGCGCCCGGCCTCGGCTACTACGCGG
CCGGCGCGGCGAAGTTCGGCGCCGCCGGCGATTTCGTCACCGCGCCGGAGATGACCCCGCTTTTCGGGCGCACGCTCGCG
CACGCGATCGCACCCGTGCTGCGCGAAACCGGCGGCGACGTACTCGAACTCGGCGGCGGCAGCGGCCGGCTGGCGGCCGA
CCTGCTCGCCGAACTCGATACGCTCGGCGCCCTGCCCCCGCGTTACCGCATCCTCGAAGTGAGCGCCGACTTGCGCGCGC
GCCAGCAGCAAACGGTCGCGACCGACCTGCCGCGGCTCGCCAGCCGCGTCGAATGGCTCGACGCCGTGCCCGAGCGCTTC
AGCGGCGTGATCCTCGGCAACGAGGTGCTCGACGCGCTGCCGGCCGAGCTCGTGCACTGGACGGCAGACGGACCACGCCT
GCGCGGCGTTGTGCGCAAAGGCGACGGCTTCGCCTGGGAGGACGGGCCGATCGCCGACGACGCGCTGCGCGAACGCGCGA
CAGCCCTGGCGCTCGCGCCGGGCTACGTCTCCGAAATCAATCCTGCCGCCGAAGCGCTCGTCGCCTCACTCGCGCAGTGC
CTCGTGCGCGGGCTGATCCTGATGATCGATTACGGTTTCGGCGCGCGCGAGTACTACCACCCGCAACGCAGCATGGGCAC
GCTGCGCGTCCATTACCGCCACCACGCTTTGGACGACCCGTTCTATCTCCCCGGCCTGTGCGACCTGACCGCGCACGTCG
ACTTCAGCGCGATCGCGCGCGCGGGCGTGGCGGCGGGACTGGAACTCGCCGGCTACACGAGCCAGGCGAGCTTCCTGCTG
AGCGGCGGGCTCGCCGAACTGTTGATGCAGACGCCGCCCGAGGATGCGGCGACCTATCTGCCGCAGGCCAACGCCGTGCA
GCGTCTGGTATCGCCGGCCGAGATGGGCGAACTCTTCAAGGTGATCGGGTTTACGCGCGGCGCGGTCGGAGAACTGGCCG
GCTTCGCGCAAGGCGATCGCCGGCACACGCTCTAA

Upstream 100 bases:

>100_bases
GCGCCGACGCCGCGCCGACACGCCTGGCCCCACCGGTGATCAATACCACTTTGCCTTGCATCGGGATTCGCCCTTATAGT
CCCTCGATTCCGCATTATCC

Downstream 100 bases:

>100_bases
ACGCCGGGCCGCGCGACGCTGACTGGCGGCGGACTACACCAGCGGCAGTTGCACTTCCTCTTCCTCGGGCGACAGGCGCG
TGACGCGAACCGCGTGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFGAAGDFVTAPEMTPLFGRTLA
HAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPPRYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERF
SGVILGNEVLDALPAELVHWTADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC
LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIARAGVAAGLELAGYTSQASFLL
SGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFKVIGFTRGAVGELAGFAQGDRRHTL

Sequences:

>Translated_384_residues
MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFGAAGDFVTAPEMTPLFGRTLA
HAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPPRYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERF
SGVILGNEVLDALPAELVHWTADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC
LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIARAGVAAGLELAGYTSQASFLL
SGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFKVIGFTRGAVGELAGFAQGDRRHTL
>Mature_384_residues
MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFGAAGDFVTAPEMTPLFGRTLA
HAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPPRYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERF
SGVILGNEVLDALPAELVHWTADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC
LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIARAGVAAGLELAGYTSQASFLL
SGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFKVIGFTRGAVGELAGFAQGDRRHTL

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=374, Percent_Identity=28.3422459893048, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193211224, Length=357, Percent_Identity=26.6106442577031, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24645885, Length=378, Percent_Identity=28.042328042328, Blast_Score=89, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40909; Mature: 40909

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCC
AAGDFVTAPEMTPLFGRTLAHAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCC
RYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERFSGVILGNEVLDALPAELVHW
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHEEE
TADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC
CCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHHH
LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIAR
HHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCHHHHHHCCCHHHHHH
AGVAAGLELAGYTSQASFLLSGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFK
HHHHHCCHHCCCCCHHHHHHHCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCHHHHHHHHH
VIGFTRGAVGELAGFAQGDRRHTL
HHHHCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCC
AAGDFVTAPEMTPLFGRTLAHAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCC
RYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERFSGVILGNEVLDALPAELVHW
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHEEE
TADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC
CCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHHH
LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIAR
HHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCHHHHHHCCCHHHHHH
AGVAAGLELAGYTSQASFLLSGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFK
HHHHHCCHHCCCCCHHHHHHHCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCHHHHHHHHH
VIGFTRGAVGELAGFAQGDRRHTL
HHHHCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA