| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318720
Identifier: 74318720
GI number: 74318720
Start: 2784191
End: 2785345
Strand: Direct
Name: 74318720
Synonym: Tbd_2702
Alternate gene names: NA
Gene position: 2784191-2785345 (Clockwise)
Preceding gene: 74318718
Following gene: 74318740
Centisome position: 95.68
GC content: 70.48
Gene sequence:
>1155_bases ATGAACTCGATGCTGCCCGTCCCCAGTCCCGACGCGCTTGCGCACAGCCGGCGCGTCGTCACCCATGTGCACGCGTTGCT CGACGCGGCCGGCGGCTGGATACCGTTTTCACGCTTCATGCAAGCCGTCCTGTACGCGCCCGGCCTCGGCTACTACGCGG CCGGCGCGGCGAAGTTCGGCGCCGCCGGCGATTTCGTCACCGCGCCGGAGATGACCCCGCTTTTCGGGCGCACGCTCGCG CACGCGATCGCACCCGTGCTGCGCGAAACCGGCGGCGACGTACTCGAACTCGGCGGCGGCAGCGGCCGGCTGGCGGCCGA CCTGCTCGCCGAACTCGATACGCTCGGCGCCCTGCCCCCGCGTTACCGCATCCTCGAAGTGAGCGCCGACTTGCGCGCGC GCCAGCAGCAAACGGTCGCGACCGACCTGCCGCGGCTCGCCAGCCGCGTCGAATGGCTCGACGCCGTGCCCGAGCGCTTC AGCGGCGTGATCCTCGGCAACGAGGTGCTCGACGCGCTGCCGGCCGAGCTCGTGCACTGGACGGCAGACGGACCACGCCT GCGCGGCGTTGTGCGCAAAGGCGACGGCTTCGCCTGGGAGGACGGGCCGATCGCCGACGACGCGCTGCGCGAACGCGCGA CAGCCCTGGCGCTCGCGCCGGGCTACGTCTCCGAAATCAATCCTGCCGCCGAAGCGCTCGTCGCCTCACTCGCGCAGTGC CTCGTGCGCGGGCTGATCCTGATGATCGATTACGGTTTCGGCGCGCGCGAGTACTACCACCCGCAACGCAGCATGGGCAC GCTGCGCGTCCATTACCGCCACCACGCTTTGGACGACCCGTTCTATCTCCCCGGCCTGTGCGACCTGACCGCGCACGTCG ACTTCAGCGCGATCGCGCGCGCGGGCGTGGCGGCGGGACTGGAACTCGCCGGCTACACGAGCCAGGCGAGCTTCCTGCTG AGCGGCGGGCTCGCCGAACTGTTGATGCAGACGCCGCCCGAGGATGCGGCGACCTATCTGCCGCAGGCCAACGCCGTGCA GCGTCTGGTATCGCCGGCCGAGATGGGCGAACTCTTCAAGGTGATCGGGTTTACGCGCGGCGCGGTCGGAGAACTGGCCG GCTTCGCGCAAGGCGATCGCCGGCACACGCTCTAA
Upstream 100 bases:
>100_bases GCGCCGACGCCGCGCCGACACGCCTGGCCCCACCGGTGATCAATACCACTTTGCCTTGCATCGGGATTCGCCCTTATAGT CCCTCGATTCCGCATTATCC
Downstream 100 bases:
>100_bases ACGCCGGGCCGCGCGACGCTGACTGGCGGCGGACTACACCAGCGGCAGTTGCACTTCCTCTTCCTCGGGCGACAGGCGCG TGACGCGAACCGCGTGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFGAAGDFVTAPEMTPLFGRTLA HAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPPRYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERF SGVILGNEVLDALPAELVHWTADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIARAGVAAGLELAGYTSQASFLL SGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFKVIGFTRGAVGELAGFAQGDRRHTL
Sequences:
>Translated_384_residues MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFGAAGDFVTAPEMTPLFGRTLA HAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPPRYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERF SGVILGNEVLDALPAELVHWTADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIARAGVAAGLELAGYTSQASFLL SGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFKVIGFTRGAVGELAGFAQGDRRHTL >Mature_384_residues MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFGAAGDFVTAPEMTPLFGRTLA HAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPPRYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERF SGVILGNEVLDALPAELVHWTADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIARAGVAAGLELAGYTSQASFLL SGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFKVIGFTRGAVGELAGFAQGDRRHTL
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=374, Percent_Identity=28.3422459893048, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193211224, Length=357, Percent_Identity=26.6106442577031, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI24645885, Length=378, Percent_Identity=28.042328042328, Blast_Score=89, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40909; Mature: 40909
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCC AAGDFVTAPEMTPLFGRTLAHAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCC RYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERFSGVILGNEVLDALPAELVHW CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHEEE TADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC CCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHHH LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIAR HHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCHHHHHHCCCHHHHHH AGVAAGLELAGYTSQASFLLSGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFK HHHHHCCHHCCCCCHHHHHHHCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCHHHHHHHHH VIGFTRGAVGELAGFAQGDRRHTL HHHHCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNSMLPVPSPDALAHSRRVVTHVHALLDAAGGWIPFSRFMQAVLYAPGLGYYAAGAAKFG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCC AAGDFVTAPEMTPLFGRTLAHAIAPVLRETGGDVLELGGGSGRLAADLLAELDTLGALPP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCC RYRILEVSADLRARQQQTVATDLPRLASRVEWLDAVPERFSGVILGNEVLDALPAELVHW CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHEEE TADGPRLRGVVRKGDGFAWEDGPIADDALRERATALALAPGYVSEINPAAEALVASLAQC CCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHHH LVRGLILMIDYGFGAREYYHPQRSMGTLRVHYRHHALDDPFYLPGLCDLTAHVDFSAIAR HHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCHHHHHHCCCHHHHHH AGVAAGLELAGYTSQASFLLSGGLAELLMQTPPEDAATYLPQANAVQRLVSPAEMGELFK HHHHHCCHHCCCCCHHHHHHHCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCHHHHHHHHH VIGFTRGAVGELAGFAQGDRRHTL HHHHCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA