| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is chrA1 [H]
Identifier: 74318674
GI number: 74318674
Start: 2731975
End: 2733498
Strand: Direct
Name: chrA1 [H]
Synonym: Tbd_2656
Alternate gene names: 74318674
Gene position: 2731975-2733498 (Clockwise)
Preceding gene: 74318669
Following gene: 74318675
Centisome position: 93.89
GC content: 67.26
Gene sequence:
>1524_bases ATGAGAGACACTGGGAGGCCGCGCTGGTCCCATGCAGGCGAGCCGCGCGTTGCGCCGCCGCGTCCGCTGCGTCTAGAATC ACGGCGTCGGGGTACCGGTTCCCGGCATCCGGGTTCCGCCCGCAAGACGTGTCACGTCCAAGCCTGGTTTTATCCACTCT CGGCTGGAGAACGACTCTTGGACACTGCGCGAACGCTTCCTTTTCCCCCGCCCGCCCCCGTGAAGCTCGGAAGCGCGCTC CGCTACTGGCTCAAGCTCGGCTTCGTCAGCTTCGGCGGCCCGGCCGGGCAGATCGCGATGATGCATCACGAGCTCGTCGA GAAACGGCGCTGGATTTCCGAGCACCGCTACCTGCATGCGCTCAACTACTGCATGTTGCTGCCGGGACCCGAGGCCACGC AGCTCGCGATCTATGTCAGCTGGCTCCTGCACGGCACCCTCGGCGGTGTCCTCGCGGGCGTGCTGTTCGTGCTGCCGGGC TTCCTGCTGCTCGCGCTCCTCGCCGCGCTCTATCTCGCCTGGGGCGAGGTGACGCTGGTGCAGGGGCTTTTTTACGGCAT CCGGCCGGCCGTCGTCGCGGTCGTGCTGTTCGCGGCCTGGCGCATCGGCAGCCGCGCGCTCAAGAACGAAGTGCTCTGGG GCATGGCCGCGCTCGCGTTCATTGGCATCTTCGTCTTCGACATCGGCTTTCCCTGGATCGTCCTCGCCGCGGCACTGCTC GGTGCGCTCGGCGGCAAGTTCGCGCCGCATAAGTTCAGGACGGGCGGCGGGCATGGCGCCGGCCACAAGGCATACGGCGC GGCGCTGATCGACGACGATACGCCACCGCCCGCGCACGCGCGATTCGCCTGGCGCCGCCTGCTCGCGACCAGCGGCGTCT TCGTGCTGATCTGGCTCGGCGCGATGCTGGCCCTGCGTGGTCTGCCCGAGCTGCAGCACATGGGCGACTTCTTTACCGGC GCGGCCTTCCTCACGATCGGCGGCGCCTACGCCGTGCTGCCCTATGTCTACGAAGGCGCGGTCGAACAGTTCGGCTGGCT GAGCGGGGTGCAGATGATGGACGGCCTCGCGCTCGGCGAGACGACGCCGGGGCCGCTCATCATGGTCGTCACCTGGGTCG GCTATCTGGGCGGCGTGAGCAAGGAGATTCTTGCCGACCCGGTCGCCGCCGGGTTTGCCGGCGCGGCCGTCGCAACTTTT TTCACCTTCCTGCCGTCCTTCTTTTTCATCCTCGCCGGCGCCCCGCTGGTCGAGGCGACGCGCGGCGAGCTCAGGTTCAC GGCGCCGCTCACCGGAATCACCGCCGCGGTCGTCGGCGTCATCGTCAATCTGGCGGTATTCTTTGCATGGCACAGCTTCT GGCCGCAGGGAAGCGCGGACGCGCCGTTCAGGGGTGATTTCGAGTGGTTTTCGGTCATCGTCGCGGTCGTCGCCTTTGTC GCGCTGTGGAAATACCGCGCCGACATCGTCAAGGTCATCGGCGCCTGCGCCCTCGTCGGGCTGGCGTATTCGTCATATAT GTGA
Upstream 100 bases:
>100_bases CGTCGACAGTCCGCACGGACGCGGCCTTTGCTGCAATCCTAGTGGCGCGTACCCATAGACAACAGTCGTAATTTTTTATA GGAACGATAAACGAGAACGT
Downstream 100 bases:
>100_bases GGACAGCATGGAACCCAAGATCATTCAGCCGCCGAAACGCTGTGGCTGTGCAAACCCCAGTGAGAAATGCGAGGAACTCG CGCGCACAATCCGGCCCGGG
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLLDTARTLPFPPPAPVKLGSAL RYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHALNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPG FLLLALLAALYLAWGEVTLVQGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLGAMLALRGLPELQHMGDFFTG AAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGETTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATF FTFLPSFFFILAGAPLVEATRGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV ALWKYRADIVKVIGACALVGLAYSSYM
Sequences:
>Translated_507_residues MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLLDTARTLPFPPPAPVKLGSAL RYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHALNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPG FLLLALLAALYLAWGEVTLVQGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLGAMLALRGLPELQHMGDFFTG AAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGETTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATF FTFLPSFFFILAGAPLVEATRGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV ALWKYRADIVKVIGACALVGLAYSSYM >Mature_507_residues MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLLDTARTLPFPPPAPVKLGSAL RYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHALNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPG FLLLALLAALYLAWGEVTLVQGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLGAMLALRGLPELQHMGDFFTG AAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGETTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATF FTFLPSFFFILAGAPLVEATRGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV ALWKYRADIVKVIGACALVGLAYSSYM
Specific function: This protein reduces chromate accumulation and is essential for chromate resistance [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 54718; Mature: 54718
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLL CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEEEEHHCCHHHH DTARTLPFPPPAPVKLGSALRYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHA HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPGFLLLALLAALYLAWGEVTLV HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLG HHHCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH AMLALRGLPELQHMGDFFTGAAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGE HHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATFFTFLPSFFFILAGAPLVEAT CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC RGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH ALWKYRADIVKVIGACALVGLAYSSYM HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLL CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEEEEHHCCHHHH DTARTLPFPPPAPVKLGSALRYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHA HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPGFLLLALLAALYLAWGEVTLV HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLG HHHCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH AMLALRGLPELQHMGDFFTGAAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGE HHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATFFTFLPSFFFILAGAPLVEAT CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC RGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH ALWKYRADIVKVIGACALVGLAYSSYM HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2180932; 12471500 [H]