| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318675
Identifier: 74318675
GI number: 74318675
Start: 2733506
End: 2733883
Strand: Direct
Name: 74318675
Synonym: Tbd_2657
Alternate gene names: NA
Gene position: 2733506-2733883 (Clockwise)
Preceding gene: 74318674
Following gene: 74318676
Centisome position: 93.94
GC content: 66.4
Gene sequence:
>378_bases ATGGAACCCAAGATCATTCAGCCGCCGAAACGCTGTGGCTGTGCAAACCCCAGTGAGAAATGCGAGGAACTCGCGCGCAC AATCCGGCCCGGGAAAGTCGACCCCGACGCGGTGCTGGTATTCGACGTGCGGCGCGAGGCCGACTACGCGGCGTCGAACG AGACCATTCCGGGCGCGCTATGGAAGAACCCCGACAAGATCGACGCCTGGATCGGGGCCGTGCCGCGCACGCTCGACGTC GTGATCTATTGCGTGCGCGGCGGTGCGGTATCCAACGCCGTCGTCGACCGGCTTCACGCGGCCGGCGTCAAGGCGCGCTA CATCGAAGGCGGCCTCGAGGCCTACAAGGCCGCGGGCGGCAAGGTCGCGCGCAAGTAA
Upstream 100 bases:
>100_bases GCCTTTGTCGCGCTGTGGAAATACCGCGCCGACATCGTCAAGGTCATCGGCGCCTGCGCCCTCGTCGGGCTGGCGTATTC GTCATATATGTGAGGACAGC
Downstream 100 bases:
>100_bases GGCCCGGCAAAAAGTAGTTGACCAGTTTACTAGGTTATTCTATTGTTCGCGCTCGCTATTTTTGGAGAGAGAGCGGAATC ATGGAACGTGAAATCAACGG
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Manganese And Iron Superoxide Dismutase; Rhodanese-Like Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGALWKNPDKIDAWIGAVPRTLDV VIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGGKVARK
Sequences:
>Translated_125_residues MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGALWKNPDKIDAWIGAVPRTLDV VIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGGKVARK >Mature_125_residues MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGALWKNPDKIDAWIGAVPRTLDV VIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGGKVARK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13472; Mature: 13472
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGAL CCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHH WKNPDKIDAWIGAVPRTLDVVIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGG CCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC KVARK CCCCC >Mature Secondary Structure MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGAL CCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHH WKNPDKIDAWIGAVPRTLDVVIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGG CCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC KVARK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA