Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318675

Identifier: 74318675

GI number: 74318675

Start: 2733506

End: 2733883

Strand: Direct

Name: 74318675

Synonym: Tbd_2657

Alternate gene names: NA

Gene position: 2733506-2733883 (Clockwise)

Preceding gene: 74318674

Following gene: 74318676

Centisome position: 93.94

GC content: 66.4

Gene sequence:

>378_bases
ATGGAACCCAAGATCATTCAGCCGCCGAAACGCTGTGGCTGTGCAAACCCCAGTGAGAAATGCGAGGAACTCGCGCGCAC
AATCCGGCCCGGGAAAGTCGACCCCGACGCGGTGCTGGTATTCGACGTGCGGCGCGAGGCCGACTACGCGGCGTCGAACG
AGACCATTCCGGGCGCGCTATGGAAGAACCCCGACAAGATCGACGCCTGGATCGGGGCCGTGCCGCGCACGCTCGACGTC
GTGATCTATTGCGTGCGCGGCGGTGCGGTATCCAACGCCGTCGTCGACCGGCTTCACGCGGCCGGCGTCAAGGCGCGCTA
CATCGAAGGCGGCCTCGAGGCCTACAAGGCCGCGGGCGGCAAGGTCGCGCGCAAGTAA

Upstream 100 bases:

>100_bases
GCCTTTGTCGCGCTGTGGAAATACCGCGCCGACATCGTCAAGGTCATCGGCGCCTGCGCCCTCGTCGGGCTGGCGTATTC
GTCATATATGTGAGGACAGC

Downstream 100 bases:

>100_bases
GGCCCGGCAAAAAGTAGTTGACCAGTTTACTAGGTTATTCTATTGTTCGCGCTCGCTATTTTTGGAGAGAGAGCGGAATC
ATGGAACGTGAAATCAACGG

Product: rhodanese-like protein

Products: NA

Alternate protein names: Rhodanese Domain-Containing Protein; Manganese And Iron Superoxide Dismutase; Rhodanese-Like Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGALWKNPDKIDAWIGAVPRTLDV
VIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGGKVARK

Sequences:

>Translated_125_residues
MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGALWKNPDKIDAWIGAVPRTLDV
VIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGGKVARK
>Mature_125_residues
MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGALWKNPDKIDAWIGAVPRTLDV
VIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGGKVARK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13472; Mature: 13472

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGAL
CCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHH
WKNPDKIDAWIGAVPRTLDVVIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGG
CCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
KVARK
CCCCC
>Mature Secondary Structure
MEPKIIQPPKRCGCANPSEKCEELARTIRPGKVDPDAVLVFDVRREADYAASNETIPGAL
CCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHH
WKNPDKIDAWIGAVPRTLDVVIYCVRGGAVSNAVVDRLHAAGVKARYIEGGLEAYKAAGG
CCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
KVARK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA