| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318558
Identifier: 74318558
GI number: 74318558
Start: 2610240
End: 2611352
Strand: Direct
Name: 74318558
Synonym: Tbd_2540
Alternate gene names: NA
Gene position: 2610240-2611352 (Clockwise)
Preceding gene: 74318557
Following gene: 74318559
Centisome position: 89.7
GC content: 67.74
Gene sequence:
>1113_bases GTGGCTCTCCCGTTTTTCAAAAAAGGCAAGGACAAGCCCAGCGCGCCCACGCCCAAGCAGCCCGCGCCGATCGCCGACCC GTTTACCCAGCCCATGCTCACGATGGGCCGCGCGGGCGGCAGCGGCATCGTGGTCGAAGAGACGAGCGGAGCGCCGCAGT CGCCGATCGACGAGGCCGCGATCCTCTACGCGAGTGCGCAGCCCGACATGGCCGAGCGCATGCTGCGGGACGTCCTCGCC GGGGGCGATCGCCGCGCCTGGTACATGTTGTTCGACCTCTATGCGCTGCAGAACCGCGAAAAGGACTTCGATCAGCTTGC GCTCGATTACGCGCGCCGCTTCGAGTCCTCGCCGCCGGTCTGGCACAAGCCCGCTGCCACGGAGGCCAGCGGCAGCCTGC CGCAGCAGCAGTCGGCCCAGCTCGAATTGCCAAGCCTGCTCGATAAAGCGGCGGCTGCCATGCTGCACGAAGGGATCGGC GGCGCCGCCAAGAATGCGGTCGTGCGCATCGACTTCTCGCGGATCGAGATGGTCGACGAGTCGGGCGCCGAAGAATGCGC CAGGATCCTCGGCGCCGCGCGCAAGGCCCGGCGCAAGCTCCAGGTCAGCGGGGTCGACCGCCTCATCGCCCTGCTGCAGG ATCTGCTGCGCGCAACGCACAGCCGCGCCGTCCACTGGCTGCTGCTGCTCGAGCTCTACCAGACCCTCGGACAGCAGGAG CGCTTTGAAGATCTGGCCGTCGACTACGCCGTGCGTTTCGAGGTGTCGCCGCCTTCCTGGAGCGAGGTGCAGGCCGCCGA GGTGGTCCACGCCGAGCCAGCCGCGCCGGTCGACGACGCAGTGCGGCTGAGCGGCGAAATCACGCCCGCCGACGACAGCG CGCTGCAACAACTGAGCGCCCATGCCGCCAACCACAACGAGGTGCTGGTCGACCTCAGCGAGGTCGCACGCGTCGATTAC GGCAGCGTCAGCCAGTTCATCAGCGTGCTGATGCAGTGCCTGGGCAGCGGCAAGAGCATCACCCTGCGCGGCCACAACGC GCTGATTCACGAACTTTTCCGCGTCATGGGGATCGATCAGCTGGCGCAGCTGCTGCCACGTCACCCCGACTGA
Upstream 100 bases:
>100_bases CGTCATCGCCCTCCTGGGCGGCGCCCTGCTTCGGGTTGCCGCAGCGGGTGGAGAGCGCTAGTATCTGCTGACTCCGCCCC CGACGCTCGCATACCCTTCC
Downstream 100 bases:
>100_bases GCAGGCCGGGCCCCGCAGGACGCATCGGCAGGTCGCGACCGGCTCACTACGCCGGTCGCGCAAACGCTTTTCAGGATCAT CATGGAACAGTATCGAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MALPFFKKGKDKPSAPTPKQPAPIADPFTQPMLTMGRAGGSGIVVEETSGAPQSPIDEAAILYASAQPDMAERMLRDVLA GGDRRAWYMLFDLYALQNREKDFDQLALDYARRFESSPPVWHKPAATEASGSLPQQQSAQLELPSLLDKAAAAMLHEGIG GAAKNAVVRIDFSRIEMVDESGAEECARILGAARKARRKLQVSGVDRLIALLQDLLRATHSRAVHWLLLLELYQTLGQQE RFEDLAVDYAVRFEVSPPSWSEVQAAEVVHAEPAAPVDDAVRLSGEITPADDSALQQLSAHAANHNEVLVDLSEVARVDY GSVSQFISVLMQCLGSGKSITLRGHNALIHELFRVMGIDQLAQLLPRHPD
Sequences:
>Translated_370_residues MALPFFKKGKDKPSAPTPKQPAPIADPFTQPMLTMGRAGGSGIVVEETSGAPQSPIDEAAILYASAQPDMAERMLRDVLA GGDRRAWYMLFDLYALQNREKDFDQLALDYARRFESSPPVWHKPAATEASGSLPQQQSAQLELPSLLDKAAAAMLHEGIG GAAKNAVVRIDFSRIEMVDESGAEECARILGAARKARRKLQVSGVDRLIALLQDLLRATHSRAVHWLLLLELYQTLGQQE RFEDLAVDYAVRFEVSPPSWSEVQAAEVVHAEPAAPVDDAVRLSGEITPADDSALQQLSAHAANHNEVLVDLSEVARVDY GSVSQFISVLMQCLGSGKSITLRGHNALIHELFRVMGIDQLAQLLPRHPD >Mature_369_residues ALPFFKKGKDKPSAPTPKQPAPIADPFTQPMLTMGRAGGSGIVVEETSGAPQSPIDEAAILYASAQPDMAERMLRDVLAG GDRRAWYMLFDLYALQNREKDFDQLALDYARRFESSPPVWHKPAATEASGSLPQQQSAQLELPSLLDKAAAAMLHEGIGG AAKNAVVRIDFSRIEMVDESGAEECARILGAARKARRKLQVSGVDRLIALLQDLLRATHSRAVHWLLLLELYQTLGQQER FEDLAVDYAVRFEVSPPSWSEVQAAEVVHAEPAAPVDDAVRLSGEITPADDSALQQLSAHAANHNEVLVDLSEVARVDYG SVSQFISVLMQCLGSGKSITLRGHNALIHELFRVMGIDQLAQLLPRHPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40369; Mature: 40238
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPFFKKGKDKPSAPTPKQPAPIADPFTQPMLTMGRAGGSGIVVEETSGAPQSPIDEAA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHH ILYASAQPDMAERMLRDVLAGGDRRAWYMLFDLYALQNREKDFDQLALDYARRFESSPPV EEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC WHKPAATEASGSLPQQQSAQLELPSLLDKAAAAMLHEGIGGAAKNAVVRIDFSRIEMVDE CCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCEEEEEHHHHHHHHC SGAEECARILGAARKARRKLQVSGVDRLIALLQDLLRATHSRAVHWLLLLELYQTLGQQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RFEDLAVDYAVRFEVSPPSWSEVQAAEVVHAEPAAPVDDAVRLSGEITPADDSALQQLSA HHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHH HAANHNEVLVDLSEVARVDYGSVSQFISVLMQCLGSGKSITLRGHNALIHELFRVMGIDQ HCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCHHH LAQLLPRHPD HHHHCCCCCC >Mature Secondary Structure ALPFFKKGKDKPSAPTPKQPAPIADPFTQPMLTMGRAGGSGIVVEETSGAPQSPIDEAA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHH ILYASAQPDMAERMLRDVLAGGDRRAWYMLFDLYALQNREKDFDQLALDYARRFESSPPV EEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC WHKPAATEASGSLPQQQSAQLELPSLLDKAAAAMLHEGIGGAAKNAVVRIDFSRIEMVDE CCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCEEEEEHHHHHHHHC SGAEECARILGAARKARRKLQVSGVDRLIALLQDLLRATHSRAVHWLLLLELYQTLGQQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RFEDLAVDYAVRFEVSPPSWSEVQAAEVVHAEPAAPVDDAVRLSGEITPADDSALQQLSA HHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHH HAANHNEVLVDLSEVARVDYGSVSQFISVLMQCLGSGKSITLRGHNALIHELFRVMGIDQ HCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCHHH LAQLLPRHPD HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA