| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is znuB [C]
Identifier: 74318557
GI number: 74318557
Start: 2609430
End: 2610200
Strand: Direct
Name: znuB [C]
Synonym: Tbd_2539
Alternate gene names: 74318557
Gene position: 2609430-2610200 (Clockwise)
Preceding gene: 74318556
Following gene: 74318558
Centisome position: 89.68
GC content: 73.02
Gene sequence:
>771_bases ATGAACGCGGCGTTCGCCCCCGACCTGCTGGCCTGGCCCTTCGCGGTCGGGCTGCTGGTGCTCGCGACCCACGTCCCGCT CGGGCGGCGGGTGCTCGCGCGCGGCATCATTTTTCTCGACCTCGCGATCGCGCAGCTCGCCGTCCTCGGCGTAGTCGCGG CACACGCCCTCGATCTCGCCGCCAGCGACTGGGCCACGCAGGCCGCCGCGGCGACGGCCGCGCTCGCGGGCGCCGCGCTG CTCGCAGGCTTCGAAAAGCGCTGGCCCGCGATCCAGGAAGCGCTGATCGGTTCGAGCTTTGTCGTCGGCGCCAGCCTCGC CGTCCTGCTGCTGGCGGGCGACCCCCACGGCGGCGAGCATCTGGCCGAACTGCTGACCGGCCAGCTTTTGTGGGCGACGC GTTCGCAGGCGCTGTGGATCGCCGCGCTGTACGCGCTGCTGCTCGCGGTAATGGCATGGCGGCGCGAGCGCCTCACAGGT CTCCCCTTCTATCTCGTCTTCGCGCTGGCGATCACGGCGTCCGTGCAACTGGTCGGCGTGTATCTGGTGTTCGCGAGCCT GATTCTGCCGGCGCTGGCGGTGCGCGGGCTGGCCCCAGCCCGCGCCGTCGCGAGCGGCTGGCTGCTCGGTGCCGCGGGCT ACGGTGGCGGCCTCGCATTCTCGGCCGGCTACGACCTGCCGGCAGGGCCCGCGATCGTCGTCGCGCTGGCCGTCATCGCC CTCCTGGGCGGCGCCCTGCTTCGGGTTGCCGCAGCGGGTGGAGAGCGCTAG
Upstream 100 bases:
>100_bases CGGCGCTCGCCTTGCCGTATACCGTGGGCGGCAACGCGCAGGCGAAGGATTTGTTCGCGCTCTTCGACGACACGCTGGAC CAGCTGCTGAAGGCGGCACG
Downstream 100 bases:
>100_bases TATCTGCTGACTCCGCCCCCGACGCTCGCATACCCTTCCGTGGCTCTCCCGTTTTTCAAAAAAGGCAAGGACAAGCCCAG CGCGCCCACGCCCAAGCAGC
Product: zinc/manganese transport system permease
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: ABC 3 Transport Family Protein; Zinc/Manganese Transport System Permease Protein; Metal Ion ABC Transporter Permease Component
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNAAFAPDLLAWPFAVGLLVLATHVPLGRRVLARGIIFLDLAIAQLAVLGVVAAHALDLAASDWATQAAAATAALAGAAL LAGFEKRWPAIQEALIGSSFVVGASLAVLLLAGDPHGGEHLAELLTGQLLWATRSQALWIAALYALLLAVMAWRRERLTG LPFYLVFALAITASVQLVGVYLVFASLILPALAVRGLAPARAVASGWLLGAAGYGGGLAFSAGYDLPAGPAIVVALAVIA LLGGALLRVAAAGGER
Sequences:
>Translated_256_residues MNAAFAPDLLAWPFAVGLLVLATHVPLGRRVLARGIIFLDLAIAQLAVLGVVAAHALDLAASDWATQAAAATAALAGAAL LAGFEKRWPAIQEALIGSSFVVGASLAVLLLAGDPHGGEHLAELLTGQLLWATRSQALWIAALYALLLAVMAWRRERLTG LPFYLVFALAITASVQLVGVYLVFASLILPALAVRGLAPARAVASGWLLGAAGYGGGLAFSAGYDLPAGPAIVVALAVIA LLGGALLRVAAAGGER >Mature_256_residues MNAAFAPDLLAWPFAVGLLVLATHVPLGRRVLARGIIFLDLAIAQLAVLGVVAAHALDLAASDWATQAAAATAALAGAAL LAGFEKRWPAIQEALIGSSFVVGASLAVLLLAGDPHGGEHLAELLTGQLLWATRSQALWIAALYALLLAVMAWRRERLTG LPFYLVFALAITASVQLVGVYLVFASLILPALAVRGLAPARAVASGWLLGAAGYGGGLAFSAGYDLPAGPAIVVALAVIA LLGGALLRVAAAGGER
Specific function: Involved In The High-Affinity Zinc Uptake Transport System. [C]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26004; Mature: 26004
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAFAPDLLAWPFAVGLLVLATHVPLGRRVLARGIIFLDLAIAQLAVLGVVAAHALDLA CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASDWATQAAAATAALAGAALLAGFEKRWPAIQEALIGSSFVVGASLAVLLLAGDPHGGEH HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHEEECCCCCHHH LAELLTGQLLWATRSQALWIAALYALLLAVMAWRRERLTGLPFYLVFALAITASVQLVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YLVFASLILPALAVRGLAPARAVASGWLLGAAGYGGGLAFSAGYDLPAGPAIVVALAVIA HHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCEEEECCCCCCCCHHHHHHHHHHH LLGGALLRVAAAGGER HHHHHHHHHHHCCCCC >Mature Secondary Structure MNAAFAPDLLAWPFAVGLLVLATHVPLGRRVLARGIIFLDLAIAQLAVLGVVAAHALDLA CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASDWATQAAAATAALAGAALLAGFEKRWPAIQEALIGSSFVVGASLAVLLLAGDPHGGEH HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHEEECCCCCHHH LAELLTGQLLWATRSQALWIAALYALLLAVMAWRRERLTGLPFYLVFALAITASVQLVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YLVFASLILPALAVRGLAPARAVASGWLLGAAGYGGGLAFSAGYDLPAGPAIVVALAVIA HHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCEEEECCCCCCCCHHHHHHHHHHH LLGGALLRVAAAGGER HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA