| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74318555
Identifier: 74318555
GI number: 74318555
Start: 2607195
End: 2608529
Strand: Direct
Name: 74318555
Synonym: Tbd_2537
Alternate gene names: NA
Gene position: 2607195-2608529 (Clockwise)
Preceding gene: 74318554
Following gene: 74318556
Centisome position: 89.6
GC content: 67.04
Gene sequence:
>1335_bases ATGTTACGTCCCGCCCTTGTGGCGGCCGCGCTCGCGGCCGCCTTTCCGGCCCACGCCGACAGCGAGGTCGACGCCTTGCG TGCCGAACTGAAGGAATTGAAAGCAAGCTACGAGGCGCGCCTGCGCGCCCTCGAAGCCCGCCTCGAGGCCGCCGACGCCG CGCCTGCTCCCGCGCCTGCCGTCGACACCGCGCAAGCCGACGCACCTGCCGCGCCGAAGCTCAACCCGGATATCTCGCTG ATCCTGCAGGGCCGCTATGCCCAGCTCGACGATATCGAGCATCGCGCCATCAGCGGCTTCCTGCCGGCCGGACACGCGCA CGAGACCGCGCGCGGCTTTTCGCTCGACCACACCGAACTCGTGATGTCGGCCAGCATCGACCCGTATTTCCGCGGCTATT TCAACCTCGCCCTGCAGGACGACGAAGTCGACATCGAGGAGGCCTGGTTCCAGACGACGAGCCTCGGCGAGGGCTTGTCG ATCAAGGGCGGCCGCTTCCTTTCCGGCCTCGGCTACCAGAACGAGCAGCACCCGCACGCCTGGGACTTCGCCGACAACAG CCTGATGTATCGCGCGCTGTTCGGCGAGGCTTACGGCAACGACGGCCTGCAGCTGAAATGGGTCGCGCCGACCGAGCTGT ACATGGAGTTCGGCGCCGAGGCCGGACGCGGCGCCAACTTCCCGGGCACCGACCGCAACCGGAACGGCGCCGGCAGCTAC ACGCTGTTCGGCCACCTCGGCGGCGATCTCGGCGTCTCGCACAGCTGGCGCGCCGGTCTATCCTATCTGCACGCCAGGGC GAGCGCGCGCGAAGGCGAACTCGACGACGTGGACGACGTCGAAATCGAGACCCTGTTCTCCGGCACGAGCAAGACCTGGC TCGCGGACTTCGTCTGGAAGTGGGCGCCCGAGGGCAACGCGCGCGAACGCAACTTCAAGTTCGCGGCCGAGTACTTCCGC CGCGAGGAGAGCGGCGAGTTGTGCGGCTTCGACGGCGTCAGCTCATGCACGGCCGGCACCGACGACGCGTACCGCGCGCG CCAGTCCGGCTTCTACGCGCAGGGCGTCTACCAGTTCATGCCGCGGTGGCGCACCGGCTACCGCTACGACCGGCTCGACC CGGGTTCGGTCGATTTCGGCGCGAATCCGCTCAGCCTCGCAAAAAGCGACTACAAGCCGACCCGCCACTCGCTGATGCTC GATTACGCACCGTCGGAGTTTTCCCGTCTGCGGCTGCAATACTCGAAGGACCAGTCGATGGCCGAGGTAAGCGAGAACCA GTGGTTCGTGCAATACATCCACAGTCTGGGCGCGCACGGCGCTCACAAATTCTGA
Upstream 100 bases:
>100_bases CCCCCAGGCCCGCGCCCCGCCCCCCACCGTCTGAAATCGCAATCTGTCGACCCTCCCGCGAGGCGCGTCGACCGTTTCCC TTTTTTGACGGAGTTCAAAC
Downstream 100 bases:
>100_bases GGAGACCGCCATGAAACGACTGCTTCTTGCGCTCGCCCTGTGGCTGCCCGTCGCCGCCTACGCGAGCCTCAACGTCTTCG CCTGCGAGCCCGAGTGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MLRPALVAAALAAAFPAHADSEVDALRAELKELKASYEARLRALEARLEAADAAPAPAPAVDTAQADAPAAPKLNPDISL ILQGRYAQLDDIEHRAISGFLPAGHAHETARGFSLDHTELVMSASIDPYFRGYFNLALQDDEVDIEEAWFQTTSLGEGLS IKGGRFLSGLGYQNEQHPHAWDFADNSLMYRALFGEAYGNDGLQLKWVAPTELYMEFGAEAGRGANFPGTDRNRNGAGSY TLFGHLGGDLGVSHSWRAGLSYLHARASAREGELDDVDDVEIETLFSGTSKTWLADFVWKWAPEGNARERNFKFAAEYFR REESGELCGFDGVSSCTAGTDDAYRARQSGFYAQGVYQFMPRWRTGYRYDRLDPGSVDFGANPLSLAKSDYKPTRHSLML DYAPSEFSRLRLQYSKDQSMAEVSENQWFVQYIHSLGAHGAHKF
Sequences:
>Translated_444_residues MLRPALVAAALAAAFPAHADSEVDALRAELKELKASYEARLRALEARLEAADAAPAPAPAVDTAQADAPAAPKLNPDISL ILQGRYAQLDDIEHRAISGFLPAGHAHETARGFSLDHTELVMSASIDPYFRGYFNLALQDDEVDIEEAWFQTTSLGEGLS IKGGRFLSGLGYQNEQHPHAWDFADNSLMYRALFGEAYGNDGLQLKWVAPTELYMEFGAEAGRGANFPGTDRNRNGAGSY TLFGHLGGDLGVSHSWRAGLSYLHARASAREGELDDVDDVEIETLFSGTSKTWLADFVWKWAPEGNARERNFKFAAEYFR REESGELCGFDGVSSCTAGTDDAYRARQSGFYAQGVYQFMPRWRTGYRYDRLDPGSVDFGANPLSLAKSDYKPTRHSLML DYAPSEFSRLRLQYSKDQSMAEVSENQWFVQYIHSLGAHGAHKF >Mature_444_residues MLRPALVAAALAAAFPAHADSEVDALRAELKELKASYEARLRALEARLEAADAAPAPAPAVDTAQADAPAAPKLNPDISL ILQGRYAQLDDIEHRAISGFLPAGHAHETARGFSLDHTELVMSASIDPYFRGYFNLALQDDEVDIEEAWFQTTSLGEGLS IKGGRFLSGLGYQNEQHPHAWDFADNSLMYRALFGEAYGNDGLQLKWVAPTELYMEFGAEAGRGANFPGTDRNRNGAGSY TLFGHLGGDLGVSHSWRAGLSYLHARASAREGELDDVDDVEIETLFSGTSKTWLADFVWKWAPEGNARERNFKFAAEYFR REESGELCGFDGVSSCTAGTDDAYRARQSGFYAQGVYQFMPRWRTGYRYDRLDPGSVDFGANPLSLAKSDYKPTRHSLML DYAPSEFSRLRLQYSKDQSMAEVSENQWFVQYIHSLGAHGAHKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49071; Mature: 49071
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPALVAAALAAAFPAHADSEVDALRAELKELKASYEARLRALEARLEAADAAPAPAPA CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VDTAQADAPAAPKLNPDISLILQGRYAQLDDIEHRAISGFLPAGHAHETARGFSLDHTEL CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHH VMSASIDPYFRGYFNLALQDDEVDIEEAWFQTTSLGEGLSIKGGRFLSGLGYQNEQHPHA HHHCCCCHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCC WDFADNSLMYRALFGEAYGNDGLQLKWVAPTELYMEFGAEAGRGANFPGTDRNRNGAGSY CCCCCCCEEHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE TLFGHLGGDLGVSHSWRAGLSYLHARASAREGELDDVDDVEIETLFSGTSKTWLADFVWK EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHCCCCHHHHHHHHHH WAPEGNARERNFKFAAEYFRREESGELCGFDGVSSCTAGTDDAYRARQSGFYAQGVYQFM CCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH PRWRTGYRYDRLDPGSVDFGANPLSLAKSDYKPTRHSLMLDYAPSEFSRLRLQYSKDQSM HHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCHH AEVSENQWFVQYIHSLGAHGAHKF HHHHCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLRPALVAAALAAAFPAHADSEVDALRAELKELKASYEARLRALEARLEAADAAPAPAPA CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VDTAQADAPAAPKLNPDISLILQGRYAQLDDIEHRAISGFLPAGHAHETARGFSLDHTEL CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHH VMSASIDPYFRGYFNLALQDDEVDIEEAWFQTTSLGEGLSIKGGRFLSGLGYQNEQHPHA HHHCCCCHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCC WDFADNSLMYRALFGEAYGNDGLQLKWVAPTELYMEFGAEAGRGANFPGTDRNRNGAGSY CCCCCCCEEHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE TLFGHLGGDLGVSHSWRAGLSYLHARASAREGELDDVDDVEIETLFSGTSKTWLADFVWK EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHCCCCHHHHHHHHHH WAPEGNARERNFKFAAEYFRREESGELCGFDGVSSCTAGTDDAYRARQSGFYAQGVYQFM CCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH PRWRTGYRYDRLDPGSVDFGANPLSLAKSDYKPTRHSLMLDYAPSEFSRLRLQYSKDQSM HHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCHH AEVSENQWFVQYIHSLGAHGAHKF HHHHCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]