| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is grxD [H]
Identifier: 74318517
GI number: 74318517
Start: 2571495
End: 2571815
Strand: Direct
Name: grxD [H]
Synonym: Tbd_2499
Alternate gene names: 74318517
Gene position: 2571495-2571815 (Clockwise)
Preceding gene: 74318516
Following gene: 74318522
Centisome position: 88.37
GC content: 59.19
Gene sequence:
>321_bases ATGACCCCCCTCGATCGCATCCGCGAGCAAGTCACCAACAACGCCATCGTTCTGTACATGAAAGGCACGCCGCAGTTTCC GCAGTGCGGTTTCTCGTCGCGCGCGGCGCAGGTGCTGCAGGCCTGCGGCGTCAAGGATTTCCTGGCCGTCAATGTGCTGG CCGACCCTGAAATCTTCGAGAACCTGAAGTACTACGCGAACTGGCCGACCTTCCCCCAGCTCTACGTCAAGGGCGAACTG ATCGGCGGGTCCGACATCATGATCGAGATGTACCAGAAGGGCGAAATCCAGAAACTGCTCGAAGAAGCGCAAACCGCCTG A
Upstream 100 bases:
>100_bases CTTCGTCAGTCCCACTCGCCGCACGCCGAAGACCGCTTGACGGCGATGGCCGCGTGCGTATAATTCCCGAGTATTCCACT CAGGTATTCAGGAGCGCTTC
Downstream 100 bases:
>100_bases CCCGCGCGACGCCGACTTGAAACGCCGACCCTAGGTCGGCGTTTTTCATGCCCTCACCCCGGCTGCTCCGGGCTCGGCTC GTCGCCCCCCGCGCCGTCGA
Product: glutaredoxin-like protein
Products: NA
Alternate protein names: Grx4; Monothiol glutaredoxin [H]
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTPLDRIREQVTNNAIVLYMKGTPQFPQCGFSSRAAQVLQACGVKDFLAVNVLADPEIFENLKYYANWPTFPQLYVKGEL IGGSDIMIEMYQKGEIQKLLEEAQTA
Sequences:
>Translated_106_residues MTPLDRIREQVTNNAIVLYMKGTPQFPQCGFSSRAAQVLQACGVKDFLAVNVLADPEIFENLKYYANWPTFPQLYVKGEL IGGSDIMIEMYQKGEIQKLLEEAQTA >Mature_105_residues TPLDRIREQVTNNAIVLYMKGTPQFPQCGFSSRAAQVLQACGVKDFLAVNVLADPEIFENLKYYANWPTFPQLYVKGELI GGSDIMIEMYQKGEIQKLLEEAQTA
Specific function: Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters [H]
COG id: COG0278
COG function: function code O; Glutaredoxin-related protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42516576, Length=86, Percent_Identity=48.8372093023256, Blast_Score=108, Evalue=9e-25, Organism=Homo sapiens, GI95113651, Length=96, Percent_Identity=41.6666666666667, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787943, Length=101, Percent_Identity=55.4455445544555, Blast_Score=127, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17556042, Length=97, Percent_Identity=48.4536082474227, Blast_Score=97, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71988153, Length=85, Percent_Identity=40, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71988159, Length=95, Percent_Identity=37.8947368421053, Blast_Score=78, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6325198, Length=100, Percent_Identity=49, Blast_Score=102, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6320303, Length=84, Percent_Identity=41.6666666666667, Blast_Score=76, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321022, Length=84, Percent_Identity=39.2857142857143, Blast_Score=74, Evalue=6e-15, Organism=Drosophila melanogaster, GI24642023, Length=93, Percent_Identity=39.7849462365591, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI19921242, Length=97, Percent_Identity=35.0515463917526, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002109 - InterPro: IPR014434 - InterPro: IPR004480 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 11948; Mature: 11817
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLDRIREQVTNNAIVLYMKGTPQFPQCGFSSRAAQVLQACGVKDFLAVNVLADPEIFE CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCHHHHH NLKYYANWPTFPQLYVKGELIGGSDIMIEMYQKGEIQKLLEEAQTA CCHHHCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure TPLDRIREQVTNNAIVLYMKGTPQFPQCGFSSRAAQVLQACGVKDFLAVNVLADPEIFE CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCHHHHH NLKYYANWPTFPQLYVKGELIGGSDIMIEMYQKGEIQKLLEEAQTA CCHHHCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]