Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318470

Identifier: 74318470

GI number: 74318470

Start: 2521708

End: 2522436

Strand: Reverse

Name: 74318470

Synonym: Tbd_2452

Alternate gene names: NA

Gene position: 2522436-2521708 (Counterclockwise)

Preceding gene: 74318472

Following gene: 74318469

Centisome position: 86.69

GC content: 64.2

Gene sequence:

>729_bases
ATGCATTTGGATAAATTGCCCGCAGCGGTTGACCCGGGGCGCACCGCCGAGACCAATTACTCGGCGCGCGAGTCCTGGCG
GATGCTCGGGATTATGGCAGAGTTTGTCGAGGCGACTGAGCGGCTCGCCCCGATCCGCCCGGCGGTCTCGATCTTCGGCA
GCGCGCGCACGCCGCCCGATCACGCCTACTACACGCTGACCGAGGACATCGCGCGCAAGCTCTCCGATGCCGGGTTCTCC
GTGATCTCGGGCGGCGGGCCCGGCATCATGGAAGCGGCGAACAAGGGCGCGTATTTCGGCAAGTCGCCGAGCGTCGGCCT
CAACATCCAGCTGCCGCACGAGCAGAGCGCGAATGCCTACCAGGACATCAGCCAGACCTTCCAGCATTTCTTCGCGCGCA
AGGTCATGTTCGTCAAGTTCGCTGCGGCCTACGTCGTCATGCCCGGCGGCTACGGCACGCTCGACGAACTGACCGAAGCG
CTGACGCTCGTGCAGACCGGCAAGATCCAGCGCATTCCGATCATCCTCGTCGGCTCCTCATTCTGGGGCGGGCTTGCGGA
GTGGGTCGGGACCCGTCTCGTGAAGGAGGGGATGGTCTCGGCCGAGGACGTGGAACTGATGCGCGTGCTCGACAAGCCGG
AAGAGGTGGTCGACGCGATCTTCAACCATTACGAGAAGCGCGGCTTCATGCCTTCGCCGGCCGAGCGCGAAATCCAGTTC
AATCTCTGA

Upstream 100 bases:

>100_bases
AGCGCATGAAAGGCGCGGTACAGATAGGACGAGCCGTCCACCAACAACAGGGTCTTGCCGGGCTGACTTACACTAGGATC
GTTCACGAGGCGCTCGAAAA

Downstream 100 bases:

>100_bases
CGTCATCCGACCCAACCGACCTTCATCTTCCGGAGCCCGCCATGCGCTACCCTGTTCTGCTGTTGACCCTCGTGCTGTGC
GGCGCCGCCGTCGCGGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPDHAYYTLTEDIARKLSDAGFS
VISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAYQDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEA
LTLVQTGKIQRIPIILVGSSFWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF
NL

Sequences:

>Translated_242_residues
MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPDHAYYTLTEDIARKLSDAGFS
VISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAYQDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEA
LTLVQTGKIQRIPIILVGSSFWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF
NL
>Mature_242_residues
MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPDHAYYTLTEDIARKLSDAGFS
VISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAYQDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEA
LTLVQTGKIQRIPIILVGSSFWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF
NL

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26619; Mature: 26619

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
HAYYTLTEDIARKLSDAGFSVISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAY
CEEEEHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHH
QDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEALTLVQTGKIQRIPIILVGSS
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEECEEEEECCC
FWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE
NL
CC
>Mature Secondary Structure
MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
HAYYTLTEDIARKLSDAGFSVISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAY
CEEEEHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHH
QDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEALTLVQTGKIQRIPIILVGSS
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEECEEEEECCC
FWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE
NL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA