| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318439
Identifier: 74318439
GI number: 74318439
Start: 2492381
End: 2493094
Strand: Reverse
Name: 74318439
Synonym: Tbd_2421
Alternate gene names: NA
Gene position: 2493094-2492381 (Counterclockwise)
Preceding gene: 74318440
Following gene: 74318436
Centisome position: 85.68
GC content: 51.54
Gene sequence:
>714_bases ATGTCCTCAGCAGATCTTCTCGCGCCTTATCGTGGCCCTCTGACAGTCGAGCAGGTTGCAACTGGAATGAATGCGGCTAC AGCCAATGCGAGGCGTTTGGCTCAGGACGCTCGGCTGTTACTCGCTAACAAGCGGTGGCCGACGGCAGCGTCACTAGCCG CTCTCTCGATAGAAGAGTCTGGAAAGGTCGTCATTCTCAGGCGGTTCGTGACCGCGAACACGGATGACATCAAGAGACTC TGGAAGGAATACCGGACTCATACAAAGAAAAACATTAACTGGATTCTTCCAGAGCTAGTCGCCAAGGGCGCACGCCGCCT AGAGGACTTCAAACCAATCGTTGATAGTGCGTCAGACCATCCAGATATATTGGATGCGATGAAGCAAATAGGCTTCTATA CGGACTGCTTGGGAAAAACAAACTGGTCGAGACCAACCGAAGTGGTGGATGAAACTTTGGCGAAGAATCTAGTCAATGCA GCTGAGGTCCTCTCGCCGGACCGGAATATCTCCGTGCGGGAACTGGAACTTTGGGCCGAACACATGGGACCCGTCTGGAA CAAGAATCTGGATTGGATGAAACAGGCTTTGGTTAATTGGTATGGCGCAATGCAAGCTGAAGGTTTAATGCCAGCAGGCT CAAATAAAATGCAGGCGTTCGTGAAGGAAGGCCTCGCGACAGATCAGGCCAAACAAATTGGCAGAGAGGTTTAA
Upstream 100 bases:
>100_bases GGGAATTTTTTGTGTCGAAGCAGGCAATGTTCGAGCCGGTTGCCTTGAATTAGGCTGGCTGTGAATTATTCTCACCGAGT CTATTGCGCTAGGCCTCACT
Downstream 100 bases:
>100_bases CAACAAGTTTGATGCGAGGCTACGCCGGCACCGAGCCGGCGTTGACAAGACAAAATGGGGTGCTAAACACCCCGTTTTGT TTTGCACTCCCGACGACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSSADLLAPYRGPLTVEQVATGMNAATANARRLAQDARLLLANKRWPTAASLAALSIEESGKVVILRRFVTANTDDIKRL WKEYRTHTKKNINWILPELVAKGARRLEDFKPIVDSASDHPDILDAMKQIGFYTDCLGKTNWSRPTEVVDETLAKNLVNA AEVLSPDRNISVRELELWAEHMGPVWNKNLDWMKQALVNWYGAMQAEGLMPAGSNKMQAFVKEGLATDQAKQIGREV
Sequences:
>Translated_237_residues MSSADLLAPYRGPLTVEQVATGMNAATANARRLAQDARLLLANKRWPTAASLAALSIEESGKVVILRRFVTANTDDIKRL WKEYRTHTKKNINWILPELVAKGARRLEDFKPIVDSASDHPDILDAMKQIGFYTDCLGKTNWSRPTEVVDETLAKNLVNA AEVLSPDRNISVRELELWAEHMGPVWNKNLDWMKQALVNWYGAMQAEGLMPAGSNKMQAFVKEGLATDQAKQIGREV >Mature_236_residues SSADLLAPYRGPLTVEQVATGMNAATANARRLAQDARLLLANKRWPTAASLAALSIEESGKVVILRRFVTANTDDIKRLW KEYRTHTKKNINWILPELVAKGARRLEDFKPIVDSASDHPDILDAMKQIGFYTDCLGKTNWSRPTEVVDETLAKNLVNAA EVLSPDRNISVRELELWAEHMGPVWNKNLDWMKQALVNWYGAMQAEGLMPAGSNKMQAFVKEGLATDQAKQIGREV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26485; Mature: 26353
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSADLLAPYRGPLTVEQVATGMNAATANARRLAQDARLLLANKRWPTAASLAALSIEES CCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCC GKVVILRRFVTANTDDIKRLWKEYRTHTKKNINWILPELVAKGARRLEDFKPIVDSASDH CCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDILDAMKQIGFYTDCLGKTNWSRPTEVVDETLAKNLVNAAEVLSPDRNISVRELELWAE HHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH HMGPVWNKNLDWMKQALVNWYGAMQAEGLMPAGSNKMQAFVKEGLATDQAKQIGREV HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure SSADLLAPYRGPLTVEQVATGMNAATANARRLAQDARLLLANKRWPTAASLAALSIEES CCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCC GKVVILRRFVTANTDDIKRLWKEYRTHTKKNINWILPELVAKGARRLEDFKPIVDSASDH CCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDILDAMKQIGFYTDCLGKTNWSRPTEVVDETLAKNLVNAAEVLSPDRNISVRELELWAE HHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH HMGPVWNKNLDWMKQALVNWYGAMQAEGLMPAGSNKMQAFVKEGLATDQAKQIGREV HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA