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The map label for this gene is yfjD [H]

Identifier: 74318389

GI number: 74318389

Start: 2445838

End: 2447136

Strand: Reverse

Name: yfjD [H]

Synonym: Tbd_2371

Alternate gene names: 74318389

Gene position: 2447136-2445838 (Counterclockwise)

Preceding gene: 74318390

Following gene: 74318388

Centisome position: 84.1

GC content: 63.74

Gene sequence:

>1299_bases
TTGGACAACATTTCCACCGGCACGCTGTTCGGCGTGCTCGCGGTCCTGCTTCTGACCTCGGCGTTCTTCTCTGCATCCGA
GACCGCGATGATGGCGATCAATCGCTATCGCCTGCGCCACGCGGCGGACTCGGGCGTGCGTGGCGCCGTGCGCGCACAGG
CGCTGCTCGATCAGACCGACAAGCTTCTGGGTGTGATCCTGCTTGGCAACAATCTCGTCAACGCGGCGTCCGGCACCCTG
TCGGCGGTGCTGGCGATCCGCCTGTTCGGCGACGGCGAGATCGTGCTGTTCACGGCGACCCTGCTGCTGACCTTCCTGAT
TCTCGTGTTCAGCGAAGTCACGCCCAAGGTTCTTGGTGCGTCGTTTCCGGAGCGCGTGGCCTATCCGGCGACACTGCTGC
TCGCGCCCCTGCTGAAGCTCGCCTACCCGGTGGTGTGGTTCGTGAATCTCTTCGTCCAGGGCATCCTCAAGCTCGCACAC
ATCAAGCAACCTGATCCGACGCAGGGCAACAGCCTGGGCCTCGAAGAGCTGCGGACCATCGTGCTGGAATCTTCGGGTCG
GCTGCCGCGCGAGCACCACCGGATACTGGTGAACCTGCTCGAGCTCGAAGACATCACCGTGGACGACGTCATGACGCCCC
GAAGCCAGATCGAGGCGATCGACATCGAGGACGATCCGGAACGCTTGCGCCAGCAGATCTCGACCAGTCACCACACGCGC
CTCGTCGTCTACCAGGGTGCGCCCGACGCCGTTCTCGGGGTTCTGCACGTGCGTCGCGTCCTCCACGCGCTGAGTGGGGA
CGTGCTCGATCCGGAGATGATGAAGCAAAACCTCGAGGAGGCCTATTTCGTTCCCGCCGGTACGCCGCTATTCACCCAGT
TGCGCAATTTCCAGACCGCCCGGCGACGGCTCGCGCTCGTGGTCGACGAATACGGCGAGCTGCAGGGGCTCGTGACGCTC
GAGGATCTGCTCGAGGAGATGGTCGGCGAATTCACCACCCAGGCGCCTTCCGACACGGGCTACCTGCGCAGGGAAGAAGA
CGGAACTTGGCTCGCGGAAGGTTCCGTGCTGTTGCGCCACCTCAACCGCAAGCTCGGCCTCGCGCTTCCGCTGGACGGGC
CGAAAACCCTCAATGGCCTTTTGCTCGAACACTTCGAGGACATTCCGGAGGCCGGGGTGAGTCTCAAGCTCGGCGATGTG
CCCGTCGAAATCGTGCAAACCCAGGATCGCGCGGTCAAAATGGCGCGGATATACCTTCCGGCCGTACCGGAAGCGGCGTC
TTCGCGCGCCTCAACTTAG

Upstream 100 bases:

>100_bases
CCTTGTGGTGGACGATCACGGGCTTCACCCTCTTGCTCATGGCCTACGTCGGGACGCAATTCGTGCTCGAAGTCGTGCTC
GGGCGTTGAGGCGGGACTGA

Downstream 100 bases:

>100_bases
TCGAAAAATCGCCGTTAAGGCGTTTGATTCTGCGTCGACCGCCTTCCCCGCGGGCGATGCCGACCCTGTTTGAGGTGGAT
TTGTCGAGAAACGAGCAATG

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MDNISTGTLFGVLAVLLLTSAFFSASETAMMAINRYRLRHAADSGVRGAVRAQALLDQTDKLLGVILLGNNLVNAASGTL
SAVLAIRLFGDGEIVLFTATLLLTFLILVFSEVTPKVLGASFPERVAYPATLLLAPLLKLAYPVVWFVNLFVQGILKLAH
IKQPDPTQGNSLGLEELRTIVLESSGRLPREHHRILVNLLELEDITVDDVMTPRSQIEAIDIEDDPERLRQQISTSHHTR
LVVYQGAPDAVLGVLHVRRVLHALSGDVLDPEMMKQNLEEAYFVPAGTPLFTQLRNFQTARRRLALVVDEYGELQGLVTL
EDLLEEMVGEFTTQAPSDTGYLRREEDGTWLAEGSVLLRHLNRKLGLALPLDGPKTLNGLLLEHFEDIPEAGVSLKLGDV
PVEIVQTQDRAVKMARIYLPAVPEAASSRAST

Sequences:

>Translated_432_residues
MDNISTGTLFGVLAVLLLTSAFFSASETAMMAINRYRLRHAADSGVRGAVRAQALLDQTDKLLGVILLGNNLVNAASGTL
SAVLAIRLFGDGEIVLFTATLLLTFLILVFSEVTPKVLGASFPERVAYPATLLLAPLLKLAYPVVWFVNLFVQGILKLAH
IKQPDPTQGNSLGLEELRTIVLESSGRLPREHHRILVNLLELEDITVDDVMTPRSQIEAIDIEDDPERLRQQISTSHHTR
LVVYQGAPDAVLGVLHVRRVLHALSGDVLDPEMMKQNLEEAYFVPAGTPLFTQLRNFQTARRRLALVVDEYGELQGLVTL
EDLLEEMVGEFTTQAPSDTGYLRREEDGTWLAEGSVLLRHLNRKLGLALPLDGPKTLNGLLLEHFEDIPEAGVSLKLGDV
PVEIVQTQDRAVKMARIYLPAVPEAASSRAST
>Mature_432_residues
MDNISTGTLFGVLAVLLLTSAFFSASETAMMAINRYRLRHAADSGVRGAVRAQALLDQTDKLLGVILLGNNLVNAASGTL
SAVLAIRLFGDGEIVLFTATLLLTFLILVFSEVTPKVLGASFPERVAYPATLLLAPLLKLAYPVVWFVNLFVQGILKLAH
IKQPDPTQGNSLGLEELRTIVLESSGRLPREHHRILVNLLELEDITVDDVMTPRSQIEAIDIEDDPERLRQQISTSHHTR
LVVYQGAPDAVLGVLHVRRVLHALSGDVLDPEMMKQNLEEAYFVPAGTPLFTQLRNFQTARRRLALVVDEYGELQGLVTL
EDLLEEMVGEFTTQAPSDTGYLRREEDGTWLAEGSVLLRHLNRKLGLALPLDGPKTLNGLLLEHFEDIPEAGVSLKLGDV
PVEIVQTQDRAVKMARIYLPAVPEAASSRAST

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=383, Percent_Identity=23.2375979112272, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI40068055, Length=338, Percent_Identity=25.7396449704142, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI40068053, Length=338, Percent_Identity=25.7396449704142, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI145693175, Length=405, Percent_Identity=42.7160493827161, Blast_Score=339, Evalue=2e-94,
Organism=Escherichia coli, GI1790664, Length=453, Percent_Identity=24.2825607064018, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI87082033, Length=236, Percent_Identity=33.0508474576271, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1786879, Length=227, Percent_Identity=24.6696035242291, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788119, Length=230, Percent_Identity=28.2608695652174, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47410; Mature: 47410

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNISTGTLFGVLAVLLLTSAFFSASETAMMAINRYRLRHAADSGVRGAVRAQALLDQTD
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KLLGVILLGNNLVNAASGTLSAVLAIRLFGDGEIVLFTATLLLTFLILVFSEVTPKVLGA
HHEEEEEECCCHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHHHCHHHHCC
SFPERVAYPATLLLAPLLKLAYPVVWFVNLFVQGILKLAHIKQPDPTQGNSLGLEELRTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
VLESSGRLPREHHRILVNLLELEDITVDDVMTPRSQIEAIDIEDDPERLRQQISTSHHTR
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHCEEECCCCCHHHHHHHHCCCCCEE
LVVYQGAPDAVLGVLHVRRVLHALSGDVLDPEMMKQNLEEAYFVPAGTPLFTQLRNFQTA
EEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
RRRLALVVDEYGELQGLVTLEDLLEEMVGEFTTQAPSDTGYLRREEDGTWLAEGSVLLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEHHHHHHHH
LNRKLGLALPLDGPKTLNGLLLEHFEDIPEAGVSLKLGDVPVEIVQTQDRAVKMARIYLP
HHHHHCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCC
AVPEAASSRAST
CCCCCCCCCCCC
>Mature Secondary Structure
MDNISTGTLFGVLAVLLLTSAFFSASETAMMAINRYRLRHAADSGVRGAVRAQALLDQTD
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KLLGVILLGNNLVNAASGTLSAVLAIRLFGDGEIVLFTATLLLTFLILVFSEVTPKVLGA
HHEEEEEECCCHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHHHCHHHHCC
SFPERVAYPATLLLAPLLKLAYPVVWFVNLFVQGILKLAHIKQPDPTQGNSLGLEELRTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
VLESSGRLPREHHRILVNLLELEDITVDDVMTPRSQIEAIDIEDDPERLRQQISTSHHTR
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHCEEECCCCCHHHHHHHHCCCCCEE
LVVYQGAPDAVLGVLHVRRVLHALSGDVLDPEMMKQNLEEAYFVPAGTPLFTQLRNFQTA
EEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
RRRLALVVDEYGELQGLVTLEDLLEEMVGEFTTQAPSDTGYLRREEDGTWLAEGSVLLRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEHHHHHHHH
LNRKLGLALPLDGPKTLNGLLLEHFEDIPEAGVSLKLGDVPVEIVQTQDRAVKMARIYLP
HHHHHCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCC
AVPEAASSRAST
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]