| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318362
Identifier: 74318362
GI number: 74318362
Start: 2418109
End: 2418762
Strand: Reverse
Name: 74318362
Synonym: Tbd_2344
Alternate gene names: NA
Gene position: 2418762-2418109 (Counterclockwise)
Preceding gene: 74318363
Following gene: 74318361
Centisome position: 83.12
GC content: 71.71
Gene sequence:
>654_bases GTGCCATACCGCCTGCGCCGCTCGCGCCGCCGCCAGACGCTGGGCCTGACCGTCACCGCGGGCGAAGTGCGCATTCACGC ACCGAGCTGGACCCCGCGCGCCGAGATCGAGCGCTACGTCCGCGAACAGCACGGCTGGCTCGCGCGCGCCTGGCAACGCA TGCAGCTGCGCGCGCCAGAATGTGACGCGGCGACGCAAATCCGCTATCTCGGTCGCGAACTCGCACTGGACATCCGGCCT TCGCTGTTCGGCGAGGTGCAGCGCGTCGGCGCGACCCTGCGGGTCTACCTGCCCGCGGGGCAGGACGCCGACGCGCTGCT AAGGGAGTGGTTGAGTAATCGCGCGGCGCGCGTCCTCGCCTGGCGGATCGCGCGACTGGCTCGACGGCTCGGTCGTGGCC CGAGCCGTTTCGCGCTTTCCGACGCGCGGACGCAGTGGGGCAGTTGCACCCGGCGCGGCCACATCCGTCTCAACTGGCGC CTCGTGCAGGCGCCGCTCGCGCTCATCGACTACGTCGCCGCGCACGAACTCGCGCATCTCGTGCACCTGGACCATTCGCC GCGCTTCTGGCAGCAGGTCGCACAGCTCTGCCCGGACGCGCTGGTGCGCCGTGCCGAACTGCGCCGCGTCGGCGCGGCAC TGTTCCGGCTGTAA
Upstream 100 bases:
>100_bases CTCACCCGGGCGGTCGAAGCCTGGATCGAAGCGGAAATGGGGAGGCTGCCGCCTGCTGCCGCACGCCAATAGCGGCGTCC TCGCCGTCGGCGAGGCGCTC
Downstream 100 bases:
>100_bases AAATGTTTTCCTGTCCGCCGACTATCTAGACTGAATACGGCAGACGCACCGAGTCCGACAAAGCGGGGACGGCACGTCGA AAACCGAACGGAGACCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Protease; Zinc Metallopeptidases-Like Protein; Conserved Metal-Dependent Hydrolase; Zinc Metallopeptidase-Like Protein; Hydrolase; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MPYRLRRSRRRQTLGLTVTAGEVRIHAPSWTPRAEIERYVREQHGWLARAWQRMQLRAPECDAATQIRYLGRELALDIRP SLFGEVQRVGATLRVYLPAGQDADALLREWLSNRAARVLAWRIARLARRLGRGPSRFALSDARTQWGSCTRRGHIRLNWR LVQAPLALIDYVAAHELAHLVHLDHSPRFWQQVAQLCPDALVRRAELRRVGAALFRL
Sequences:
>Translated_217_residues MPYRLRRSRRRQTLGLTVTAGEVRIHAPSWTPRAEIERYVREQHGWLARAWQRMQLRAPECDAATQIRYLGRELALDIRP SLFGEVQRVGATLRVYLPAGQDADALLREWLSNRAARVLAWRIARLARRLGRGPSRFALSDARTQWGSCTRRGHIRLNWR LVQAPLALIDYVAAHELAHLVHLDHSPRFWQQVAQLCPDALVRRAELRRVGAALFRL >Mature_216_residues PYRLRRSRRRQTLGLTVTAGEVRIHAPSWTPRAEIERYVREQHGWLARAWQRMQLRAPECDAATQIRYLGRELALDIRPS LFGEVQRVGATLRVYLPAGQDADALLREWLSNRAARVLAWRIARLARRLGRGPSRFALSDARTQWGSCTRRGHIRLNWRL VQAPLALIDYVAAHELAHLVHLDHSPRFWQQVAQLCPDALVRRAELRRVGAALFRL
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25126; Mature: 24995
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYRLRRSRRRQTLGLTVTAGEVRIHAPSWTPRAEIERYVREQHGWLARAWQRMQLRAPE CCCHHHHHHHHHHHCEEEEECEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCC CDAATQIRYLGRELALDIRPSLFGEVQRVGATLRVYLPAGQDADALLREWLSNRAARVLA CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH WRIARLARRLGRGPSRFALSDARTQWGSCTRRGHIRLNWRLVQAPLALIDYVAAHELAHL HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH VHLDHSPRFWQQVAQLCPDALVRRAELRRVGAALFRL HHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PYRLRRSRRRQTLGLTVTAGEVRIHAPSWTPRAEIERYVREQHGWLARAWQRMQLRAPE CCHHHHHHHHHHHCEEEEECEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCC CDAATQIRYLGRELALDIRPSLFGEVQRVGATLRVYLPAGQDADALLREWLSNRAARVLA CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH WRIARLARRLGRGPSRFALSDARTQWGSCTRRGHIRLNWRLVQAPLALIDYVAAHELAHL HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH VHLDHSPRFWQQVAQLCPDALVRRAELRRVGAALFRL HHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA