| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is phnK [H]
Identifier: 74318310
GI number: 74318310
Start: 2366518
End: 2367348
Strand: Reverse
Name: phnK [H]
Synonym: Tbd_2292
Alternate gene names: 74318310
Gene position: 2367348-2366518 (Counterclockwise)
Preceding gene: 74318311
Following gene: 74318309
Centisome position: 81.36
GC content: 64.26
Gene sequence:
>831_bases ATGAATAAAATTCTCGAAGTCAGGAATCTGTCGAAAATCTACGGCCCCGGCTGCCCGCACTGCATCGAATCGACCGGGCC GGAAGCGGACACCAACCTGTGCCCGCATTGCGGCAGCGTGGTCGCCCTCCACGACGTGTCCTTCGACCTGTTCGAGGGCG AAATTCTGGGCGTCATGGGCGAATCGGGCAGCGGCAAGTCGACGGTGGTGAAGGCCCTCTATTTCGATCAGGCGCCCTCG GGCGGCGAGGCGATCTTTTTCGACGGCGACACGCAGCACGAGCTGTTCGCGCTCAACGCCGCCCGGCAGCGCTGGCTGCG CAACCACCGCTTCGGCATGGTCTACCAGAACCCGAATCTGGGCCTGAATTTCAACATCAGTGCCGGCGGCAACATCGCCG AGCGACTGCTGATGAGCGACCTGATGGACTACGGCGCGATCCGCGAGCGGGCCAAGGCCCTGCTGGCGCGCACCGAGGTG CTGCTGTCCCGCGTCGACGACCTGCCGAAGCATTTTTCCGGCGGCATGCAGCAGCGGGTGCAGATCGCCAAGGCGCTCGC CACCCAGCCGCCGCTGCTGTTCCTCGACGAAGTGACCACCGGGCTCGACCTGTCGGTGCAGGCGCGCATTCTCGATCTGA TCCTGGAAATCCAGCAGGAGCTGAAGACCGCCATGGTCGTCGTCACCCACGACCTCGGCGTGATCCGCCTGCTGACCGGC CGCGCCATCGTCATGAAATACGGCCGCGTCATCGAGACGGGGCTCACCGATCAAATCCTGGAAGATCCCCAGCACGCCTA TACCCAGCGGCTGGTGGCTTCCGCCCTGTGA
Upstream 100 bases:
>100_bases AGTTCAGCAGCGATGCCGGCGAGAAGGTCTACCAATGCTCGGACACCGACTGGTGCGACGAAAAACTGCTGCGCAAGGAA TCGCTGCGGGGAGAAGCGGC
Downstream 100 bases:
>100_bases GGCGCGCGACATGACCCCCCCCATACTCCAGGTCGAAGGCTACGCCAAGCATTTCCAGCTGCACGAGCAGAACAAGCTGA TCCCGTCCTCGCACAACGTC
Product: phosphonate ABC transporter ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MNKILEVRNLSKIYGPGCPHCIESTGPEADTNLCPHCGSVVALHDVSFDLFEGEILGVMGESGSGKSTVVKALYFDQAPS GGEAIFFDGDTQHELFALNAARQRWLRNHRFGMVYQNPNLGLNFNISAGGNIAERLLMSDLMDYGAIRERAKALLARTEV LLSRVDDLPKHFSGGMQQRVQIAKALATQPPLLFLDEVTTGLDLSVQARILDLILEIQQELKTAMVVVTHDLGVIRLLTG RAIVMKYGRVIETGLTDQILEDPQHAYTQRLVASAL
Sequences:
>Translated_276_residues MNKILEVRNLSKIYGPGCPHCIESTGPEADTNLCPHCGSVVALHDVSFDLFEGEILGVMGESGSGKSTVVKALYFDQAPS GGEAIFFDGDTQHELFALNAARQRWLRNHRFGMVYQNPNLGLNFNISAGGNIAERLLMSDLMDYGAIRERAKALLARTEV LLSRVDDLPKHFSGGMQQRVQIAKALATQPPLLFLDEVTTGLDLSVQARILDLILEIQQELKTAMVVVTHDLGVIRLLTG RAIVMKYGRVIETGLTDQILEDPQHAYTQRLVASAL >Mature_276_residues MNKILEVRNLSKIYGPGCPHCIESTGPEADTNLCPHCGSVVALHDVSFDLFEGEILGVMGESGSGKSTVVKALYFDQAPS GGEAIFFDGDTQHELFALNAARQRWLRNHRFGMVYQNPNLGLNFNISAGGNIAERLLMSDLMDYGAIRERAKALLARTEV LLSRVDDLPKHFSGGMQQRVQIAKALATQPPLLFLDEVTTGLDLSVQARILDLILEIQQELKTAMVVVTHDLGVIRLLTG RAIVMKYGRVIETGLTDQILEDPQHAYTQRLVASAL
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4107
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI4505771, Length=234, Percent_Identity=32.4786324786325, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI9961252, Length=234, Percent_Identity=32.4786324786325, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI42741659, Length=231, Percent_Identity=32.4675324675325, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI9961250, Length=238, Percent_Identity=33.1932773109244, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI156105685, Length=224, Percent_Identity=32.5892857142857, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI9665248, Length=245, Percent_Identity=27.7551020408163, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI171184400, Length=249, Percent_Identity=28.9156626506024, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI148612844, Length=238, Percent_Identity=30.2521008403361, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI255708477, Length=238, Percent_Identity=30.2521008403361, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI42490749, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI48994997, Length=277, Percent_Identity=46.9314079422383, Blast_Score=235, Evalue=3e-63, Organism=Escherichia coli, GI1789962, Length=236, Percent_Identity=36.864406779661, Blast_Score=157, Evalue=6e-40, Organism=Escherichia coli, GI145693107, Length=247, Percent_Identity=36.4372469635627, Blast_Score=147, Evalue=9e-37, Organism=Escherichia coli, GI1787500, Length=234, Percent_Identity=33.7606837606838, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1789963, Length=236, Percent_Identity=36.4406779661017, Blast_Score=140, Evalue=7e-35, Organism=Escherichia coli, GI48994883, Length=235, Percent_Identity=36.5957446808511, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1788506, Length=237, Percent_Identity=37.9746835443038, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI1787758, Length=235, Percent_Identity=34.468085106383, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI1788225, Length=251, Percent_Identity=31.8725099601594, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1787759, Length=245, Percent_Identity=33.8775510204082, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787547, Length=273, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1789032, Length=271, Percent_Identity=29.8892988929889, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1786398, Length=238, Percent_Identity=30.672268907563, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1787548, Length=243, Percent_Identity=30.8641975308642, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789891, Length=220, Percent_Identity=33.6363636363636, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI87081834, Length=223, Percent_Identity=36.322869955157, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1787029, Length=246, Percent_Identity=30.8943089430894, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787089, Length=240, Percent_Identity=31.6666666666667, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788644, Length=251, Percent_Identity=32.2709163346614, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1786872, Length=249, Percent_Identity=32.5301204819277, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789890, Length=243, Percent_Identity=33.7448559670782, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI87081791, Length=278, Percent_Identity=27.3381294964029, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788761, Length=236, Percent_Identity=29.2372881355932, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1790162, Length=254, Percent_Identity=29.5275590551181, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789672, Length=239, Percent_Identity=25.5230125523013, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI87081709, Length=245, Percent_Identity=26.530612244898, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=31.1627906976744, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787370, Length=219, Percent_Identity=28.7671232876712, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789991, Length=227, Percent_Identity=30.8370044052863, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786703, Length=183, Percent_Identity=34.4262295081967, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1787792, Length=223, Percent_Identity=30.4932735426009, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1790534, Length=196, Percent_Identity=34.1836734693878, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789864, Length=234, Percent_Identity=25.6410256410256, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790467, Length=248, Percent_Identity=27.8225806451613, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1790525, Length=229, Percent_Identity=26.2008733624454, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788472, Length=263, Percent_Identity=27.3764258555133, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787712, Length=252, Percent_Identity=27.7777777777778, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788450, Length=236, Percent_Identity=28.3898305084746, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788210, Length=222, Percent_Identity=30.1801801801802, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786803, Length=228, Percent_Identity=25.8771929824561, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI48995001, Length=212, Percent_Identity=30.188679245283, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786253, Length=215, Percent_Identity=24.1860465116279, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787105, Length=202, Percent_Identity=30.1980198019802, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790739, Length=242, Percent_Identity=28.9256198347107, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87082268, Length=239, Percent_Identity=26.3598326359833, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI87082267, Length=243, Percent_Identity=24.6913580246914, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1786319, Length=224, Percent_Identity=25.8928571428571, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787112, Length=233, Percent_Identity=30.4721030042918, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1788897, Length=213, Percent_Identity=27.2300469483568, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790190, Length=220, Percent_Identity=30, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789586, Length=236, Percent_Identity=25.4237288135593, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1787143, Length=236, Percent_Identity=29.6610169491525, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1790544, Length=228, Percent_Identity=25.4385964912281, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17558664, Length=257, Percent_Identity=34.2412451361868, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI193211017, Length=225, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193211015, Length=223, Percent_Identity=34.0807174887892, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71996809, Length=223, Percent_Identity=34.0807174887892, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193208177, Length=231, Percent_Identity=27.7056277056277, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI25146777, Length=237, Percent_Identity=31.2236286919831, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17541710, Length=240, Percent_Identity=30, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115533592, Length=268, Percent_Identity=27.9850746268657, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI212646699, Length=239, Percent_Identity=29.2887029288703, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17569143, Length=240, Percent_Identity=29.5833333333333, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115534520, Length=265, Percent_Identity=24.9056603773585, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193209708, Length=223, Percent_Identity=27.8026905829596, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193202349, Length=233, Percent_Identity=27.8969957081545, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17543740, Length=255, Percent_Identity=26.2745098039216, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992285, Length=276, Percent_Identity=28.2608695652174, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17569145, Length=235, Percent_Identity=28.936170212766, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71984940, Length=223, Percent_Identity=28.6995515695067, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=248, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322640, Length=237, Percent_Identity=30.379746835443, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641565, Length=225, Percent_Identity=31.5555555555556, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24659289, Length=239, Percent_Identity=28.0334728033473, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI85726357, Length=248, Percent_Identity=28.6290322580645, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI281363262, Length=238, Percent_Identity=30.672268907563, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24653245, Length=238, Percent_Identity=30.672268907563, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136662, Length=222, Percent_Identity=29.2792792792793, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI21357907, Length=259, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI23397593, Length=246, Percent_Identity=29.6747967479675, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28574533, Length=225, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574744, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012700 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 30299; Mature: 30299
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKILEVRNLSKIYGPGCPHCIESTGPEADTNLCPHCGSVVALHDVSFDLFEGEILGVMG CCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHCCCEEEEEEC ESGSGKSTVVKALYFDQAPSGGEAIFFDGDTQHELFALNAARQRWLRNHRFGMVYQNPNL CCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC GLNFNISAGGNIAERLLMSDLMDYGAIRERAKALLARTEVLLSRVDDLPKHFSGGMQQRV CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QIAKALATQPPLLFLDEVTTGLDLSVQARILDLILEIQQELKTAMVVVTHDLGVIRLLTG HHHHHHHCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEHHHHC RAIVMKYGRVIETGLTDQILEDPQHAYTQRLVASAL CHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure MNKILEVRNLSKIYGPGCPHCIESTGPEADTNLCPHCGSVVALHDVSFDLFEGEILGVMG CCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHCCCEEEEEEC ESGSGKSTVVKALYFDQAPSGGEAIFFDGDTQHELFALNAARQRWLRNHRFGMVYQNPNL CCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC GLNFNISAGGNIAERLLMSDLMDYGAIRERAKALLARTEVLLSRVDDLPKHFSGGMQQRV CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QIAKALATQPPLLFLDEVTTGLDLSVQARILDLILEIQQELKTAMVVVTHDLGVIRLLTG HHHHHHHCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEHHHHC RAIVMKYGRVIETGLTDQILEDPQHAYTQRLVASAL CHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]