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The map label for this gene is nrtA [H]

Identifier: 74318290

GI number: 74318290

Start: 2343268

End: 2344539

Strand: Direct

Name: nrtA [H]

Synonym: Tbd_2272

Alternate gene names: 74318290

Gene position: 2343268-2344539 (Clockwise)

Preceding gene: 74318289

Following gene: 74318291

Centisome position: 80.53

GC content: 66.19

Gene sequence:

>1272_bases
GTGACCGACAGCCAGGACAAATCCCGCATACAGGACCCGAGCAAACGCGACTTCATCAAGCAGGGCGCTCGACTTTCGGC
CGCCGCCGCGCTCATGGCGCTGGTGCCGCCGGGCGTGCGCAGCGGCGCGTGGGCCGCGGGCTCCGACGCGCCCGAGAAGG
CCGCGCTCAAGATCGGCTTCATTCCGTTGACCGACTGCGCGTCGGTCGTCGTCGCGGCGGTCAAGGGCTTCGACAAGAAG
TACGGCCTCACGATCACGCCGAGCAAGGAGGCGTCGTGGGCGGCGGTGCGCGACAAGCTCGTCAACGGCGAGCTCGACGC
CGCACACGTGCTCTACGGCCTCATCTACGGCGTGCAGCTCGGCATCGGTGGGCCGAAAAAGGACATGGCGGTGCTCGCGA
CGATCAACAACAACGGCCAGGCGATCACGCTCTCGAACCAGTTGAGGGCGAAGGGCGTGAGCGGCGGCGCGAGCCTCGCC
AAGCTCGTCAAGGCCGAGCCGCGCGAATACACCTTCGCCCAGACCTTTCCCACCGGCACCCACGCGATGTGGCTCTACTA
CTGGCTCGCCGCCTACGGCATCGATCCCTTCCGCGACGTCAAGAACATCGTCGTGCCACCGCCGCAGATGGTCGCCAACA
TGCGCGTCGGCAACATGGACGGCTTCTGCGTCGGCGAACCCTGGGGGGCGCGCGCGATCCGCGACCGTATCGGCTTCACC
GCAGTCACGACGCAGGAAATCTGGAAGGACCACCCCGAGAAGGTGCTCGGCACGACCGCCGAATTCGTAGAGCGCTATCC
CAACACCGCACGGGCGATGGTCGCGGCGATCCTCGACGCGTCGAAGTACATCGACGACCTGAAAAACCGCGCCGAAGTCG
CGAAGCTCATCGCCGCCAAGTCCTACGTCAACACCGACGTCGCTTCGATCGAAGGCCGCATGCGCGGCCAGTACGACAAC
GGCATCGGCCGCAAGTGGGTCGACGCGAACTCCATGAAGTTCTTCGCCGGCGGCCAGGTCGGCTTCCCCTACCTCTCCGA
CGGCATGTGGTTCCTGACCCAGCACAAGCGCTGGGGGCTGCTGAAGACGCATCCCGACTATCTCGCGGTCGCGAGGACGG
TCAACCGCATCGACGTCTACAAGGACGCCGCGGCACTGACCAAAACGCCCCTGCCGTCGTCCGACATGCGCGCCTCGAAA
CTCATCGACGGCGTGGTCTGGGACGGCTCGAACCCGCAGGCCTACGCCGACGGCTTCCGAATCAAGGCCTGA

Upstream 100 bases:

>100_bases
GCAGCGGCATTCGGCATCCCCCCGCATTCCGATTTCTGGACAAAGGCGTCCGCCCTCCGAGGCGACGCCTTTTTTATTTG
CTTCATCTGGAGAAACGACC

Downstream 100 bases:

>100_bases
GCGAGCGCCGCTTCGATCCGAGTCCGACGCATCACCCTTGGAGGACTACCCCATGCACGCAATCAACGCAAGAAACCAAG
CGCGCAGCGCGCTTCCGGCG

Product: nitrate transporter periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTDSQDKSRIQDPSKRDFIKQGARLSAAAALMALVPPGVRSGAWAAGSDAPEKAALKIGFIPLTDCASVVVAAVKGFDKK
YGLTITPSKEASWAAVRDKLVNGELDAAHVLYGLIYGVQLGIGGPKKDMAVLATINNNGQAITLSNQLRAKGVSGGASLA
KLVKAEPREYTFAQTFPTGTHAMWLYYWLAAYGIDPFRDVKNIVVPPPQMVANMRVGNMDGFCVGEPWGARAIRDRIGFT
AVTTQEIWKDHPEKVLGTTAEFVERYPNTARAMVAAILDASKYIDDLKNRAEVAKLIAAKSYVNTDVASIEGRMRGQYDN
GIGRKWVDANSMKFFAGGQVGFPYLSDGMWFLTQHKRWGLLKTHPDYLAVARTVNRIDVYKDAAALTKTPLPSSDMRASK
LIDGVVWDGSNPQAYADGFRIKA

Sequences:

>Translated_423_residues
MTDSQDKSRIQDPSKRDFIKQGARLSAAAALMALVPPGVRSGAWAAGSDAPEKAALKIGFIPLTDCASVVVAAVKGFDKK
YGLTITPSKEASWAAVRDKLVNGELDAAHVLYGLIYGVQLGIGGPKKDMAVLATINNNGQAITLSNQLRAKGVSGGASLA
KLVKAEPREYTFAQTFPTGTHAMWLYYWLAAYGIDPFRDVKNIVVPPPQMVANMRVGNMDGFCVGEPWGARAIRDRIGFT
AVTTQEIWKDHPEKVLGTTAEFVERYPNTARAMVAAILDASKYIDDLKNRAEVAKLIAAKSYVNTDVASIEGRMRGQYDN
GIGRKWVDANSMKFFAGGQVGFPYLSDGMWFLTQHKRWGLLKTHPDYLAVARTVNRIDVYKDAAALTKTPLPSSDMRASK
LIDGVVWDGSNPQAYADGFRIKA
>Mature_422_residues
TDSQDKSRIQDPSKRDFIKQGARLSAAAALMALVPPGVRSGAWAAGSDAPEKAALKIGFIPLTDCASVVVAAVKGFDKKY
GLTITPSKEASWAAVRDKLVNGELDAAHVLYGLIYGVQLGIGGPKKDMAVLATINNNGQAITLSNQLRAKGVSGGASLAK
LVKAEPREYTFAQTFPTGTHAMWLYYWLAAYGIDPFRDVKNIVVPPPQMVANMRVGNMDGFCVGEPWGARAIRDRIGFTA
VTTQEIWKDHPEKVLGTTAEFVERYPNTARAMVAAILDASKYIDDLKNRAEVAKLIAAKSYVNTDVASIEGRMRGQYDNG
IGRKWVDANSMKFFAGGQVGFPYLSDGMWFLTQHKRWGLLKTHPDYLAVARTVNRIDVYKDAAALTKTPLPSSDMRASKL
IDGVVWDGSNPQAYADGFRIKA

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45967; Mature: 45836

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSQDKSRIQDPSKRDFIKQGARLSAAAALMALVPPGVRSGAWAAGSDAPEKAALKIGF
CCCCCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
IPLTDCASVVVAAVKGFDKKYGLTITPSKEASWAAVRDKLVNGELDAAHVLYGLIYGVQL
EEHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GIGGPKKDMAVLATINNNGQAITLSNQLRAKGVSGGASLAKLVKAEPREYTFAQTFPTGT
CCCCCCCCEEEEEEEECCCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCC
HAMWLYYWLAAYGIDPFRDVKNIVVPPPQMVANMRVGNMDGFCVGEPWGARAIRDRIGFT
HHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHCCEECCCCCEEECCCCCHHHHHHHCCCE
AVTTQEIWKDHPEKVLGTTAEFVERYPNTARAMVAAILDASKYIDDLKNRAEVAKLIAAK
EEEHHHHHHCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYVNTDVASIEGRMRGQYDNGIGRKWVDANSMKFFAGGQVGFPYLSDGMWFLTQHKRWGL
HHHCCHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCC
LKTHPDYLAVARTVNRIDVYKDAAALTKTPLPSSDMRASKLIDGVVWDGSNPQAYADGFR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEECCCCCCHHHCCCE
IKA
ECC
>Mature Secondary Structure 
TDSQDKSRIQDPSKRDFIKQGARLSAAAALMALVPPGVRSGAWAAGSDAPEKAALKIGF
CCCCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
IPLTDCASVVVAAVKGFDKKYGLTITPSKEASWAAVRDKLVNGELDAAHVLYGLIYGVQL
EEHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GIGGPKKDMAVLATINNNGQAITLSNQLRAKGVSGGASLAKLVKAEPREYTFAQTFPTGT
CCCCCCCCEEEEEEEECCCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCC
HAMWLYYWLAAYGIDPFRDVKNIVVPPPQMVANMRVGNMDGFCVGEPWGARAIRDRIGFT
HHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHCCEECCCCCEEECCCCCHHHHHHHCCCE
AVTTQEIWKDHPEKVLGTTAEFVERYPNTARAMVAAILDASKYIDDLKNRAEVAKLIAAK
EEEHHHHHHCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYVNTDVASIEGRMRGQYDNGIGRKWVDANSMKFFAGGQVGFPYLSDGMWFLTQHKRWGL
HHHCCHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCC
LKTHPDYLAVARTVNRIDVYKDAAALTKTPLPSSDMRASKLIDGVVWDGSNPQAYADGFR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEECCCCCCHHHCCCE
IKA
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8437564 [H]