| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318288
Identifier: 74318288
GI number: 74318288
Start: 2341343
End: 2342107
Strand: Reverse
Name: 74318288
Synonym: Tbd_2270
Alternate gene names: NA
Gene position: 2342107-2341343 (Counterclockwise)
Preceding gene: 74318293
Following gene: 74318286
Centisome position: 80.49
GC content: 66.54
Gene sequence:
>765_bases ATGAATACCTTTGTCCACACGCTGATGACCGGGCTGATCGGGCTGTTCGCACTCGTCGGCGCGGCGCAGGCCGCCGAAAC GCTGAACGTCTACGGCCCCGGCGGCCCGGCGCCGGCGATGAAGGAGGCCGCGAGCGCGTTCGAGAAAAAAACCGGCACGA AGGTCGTGGTCACCGCCGGGCCGACGCCGGAATGGATCGACAAAGCCAAGGCCGACGCCGACGTCGTCTACGGCGGGTCC GAGCACATGATGACCGACTTCGTCGGCGCGATGGAGGGGCGGATCGACGCGCCCGAGGTGGAGCCGCTGTACCTGCGCCC CTACGCGATTCTCGTCCGTCCGGGCAACCCCGCGAAAATTTCGGGCGTCAAGGATCTGCTGCGCCCCGGCGTGCAGATTC TTGTCGTGAACGGCGCCGGGCAGACCGGGGCGTGGGAGGACATGGCCGGCCGCAAAGGCGACATCGAAACGGTCAAGCGC CTGCGCAAGAACATCGTCGCCTACGCCAAGAACAGCGCCGAGGCGAAAAAGACCTGGACCGAAACGCCCGACATCGACGC GTGGCTGATCTGGAACATCTGGCAGGTGGCGAATCCCGATCTCGCCGAGGTCGTCAAAATCGAGCGCGACTACGCGATCT ACCGCGACACCAACGTCGTCCTCACGACGCAGGGCAAGACCCGCGCCCCGGCCCGCGAATTCGTCGACTTCCTCGCCTCC GACGCGGGCGAGGCGATCTTCCGCAAGTGGGGCTGGTCGCGCTGA
Upstream 100 bases:
>100_bases CTCGATCGGCGGCGGACCCTGCCGCCCGTATTGGCCGCGGCAGAACTTTTGCGCGGTCCCGCCGGTCCTCTTCGCTTCTG CGAGACGCCAAGGAGCCGCC
Downstream 100 bases:
>100_bases ACGCCGGGGTCGGCCCGGGCGTTCAGGAACGTGCGCAGCGCATGTCGGGCGAGAGCTTCATCCATTGCACGAGCCAGTTC TTGGCCCGCTCGCGCGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAGPTPEWIDKAKADADVVYGGS EHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKISGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKR LRKNIVAYAKNSAEAKKTWTETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS DAGEAIFRKWGWSR
Sequences:
>Translated_254_residues MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAGPTPEWIDKAKADADVVYGGS EHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKISGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKR LRKNIVAYAKNSAEAKKTWTETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS DAGEAIFRKWGWSR >Mature_254_residues MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAGPTPEWIDKAKADADVVYGGS EHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKISGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKR LRKNIVAYAKNSAEAKKTWTETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS DAGEAIFRKWGWSR
Specific function: Unknown
COG id: COG4588
COG function: function code R; Accessory colonization factor AcfC, contains ABC-type periplasmic domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27648; Mature: 27648
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAG CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC PTPEWIDKAKADADVVYGGSEHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKI CCHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCH SGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKRLRKNIVAYAKNSAEAKKTWT HHHHHHHCCCEEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCC ETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS CCCCCCEEEEEEHHHHCCCCHHHHHHHHCCEEEEECCEEEEEECCCCCCCHHHHHHHHHC DAGEAIFRKWGWSR CHHHHHHHHCCCCC >Mature Secondary Structure MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAG CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC PTPEWIDKAKADADVVYGGSEHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKI CCHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCH SGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKRLRKNIVAYAKNSAEAKKTWT HHHHHHHCCCEEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCC ETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS CCCCCCEEEEEEHHHHCCCCHHHHHHHHCCEEEEECCEEEEEECCCCCCCHHHHHHHHHC DAGEAIFRKWGWSR CHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA