| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318280
Identifier: 74318280
GI number: 74318280
Start: 2335215
End: 2335577
Strand: Reverse
Name: 74318280
Synonym: Tbd_2262
Alternate gene names: NA
Gene position: 2335577-2335215 (Counterclockwise)
Preceding gene: 74318281
Following gene: 74318279
Centisome position: 80.27
GC content: 63.09
Gene sequence:
>363_bases ATGAACCGTATTGATACAGGCCACGTCCTTTCCTCGAGCACCATCTCCGGCGACAAGGTCGTCAACCGCGCCGGCGAAGA CCTCGGTGAGATCAAGGATCTCATGATCGACGTCGACACGGGCCGCGTTGCCTACGCCGTGCTCGAGTCGGGCGGCTTCC TCGGCCTCGGCAGCAAGCTCTTCGCCGTGCCGCTGCCGGCGATGGAGGTCGACACCGAGCACCATCGTTTCGTCTTCGAC CAGGACAAGGAAACACTGAAGAACGCGCCCGGCTTCGACAAGGACCATTGGCCCGACTTCGCCGACCGGACCTGGGGCGC GAGCGTCCACTCGCATTACGGCATTCGGCCGTACTGGGAGTAA
Upstream 100 bases:
>100_bases GCACCCTGAGGGCAACAACCCCGTTCCGCGCAAGATCCCGGGCCGCTGAGCCCTCGTGCGTGAAGTCCTTTTTTGTTCTT AGATCGATAGGAGATAAGTC
Downstream 100 bases:
>100_bases GCCCTGAGCGAAACCGGCGCGCCCCGGCGTTTCGCCCGCGCGCGCCGCGTGCTCATGCAGTGGTCGACCGCGGCGTGCTT CGCCGCGGTCGCATTTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel; Antigen
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKLFAVPLPAMEVDTEHHRFVFD QDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE
Sequences:
>Translated_120_residues MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKLFAVPLPAMEVDTEHHRFVFD QDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE >Mature_120_residues MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKLFAVPLPAMEVDTEHHRFVFD QDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13360; Mature: 13360
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKL CCCCCCCCEECCCCCCHHHHHHHHCHHHHHHHHHEEECCCCCEEEEEECCCCEEECCCEE FAVPLPAMEVDTEHHRFVFDQDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE EEECCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKL CCCCCCCCEECCCCCCHHHHHHHHCHHHHHHHHHEEECCCCCEEEEEECCCCEEECCCEE FAVPLPAMEVDTEHHRFVFDQDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE EEECCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA