| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74318281
Identifier: 74318281
GI number: 74318281
Start: 2335629
End: 2336042
Strand: Reverse
Name: 74318281
Synonym: Tbd_2263
Alternate gene names: NA
Gene position: 2336042-2335629 (Counterclockwise)
Preceding gene: 74318282
Following gene: 74318280
Centisome position: 80.28
GC content: 67.87
Gene sequence:
>414_bases ATGGTCTCACCACAGCCGGTTTTGATCCGGCGGGCCAGAAGTCCAAGCTGTACTGGCCGCGCACGCGCATCCGCCGTGCG CAACCCAAGACAGGAGACGAGTCCGATGAAATCCAGCAGTTCCAAATCCCCCGGTGTGCAAGGCGAAGGCGACTACGCCT CGGCCAAGAAGTACAACGAGCACGCGCGTTCGTTCGCCCAGTCGGGCCGTACCGAGCAGGCAGCCAAGGACGCTGCGCCG CGCGACCCCCGCGAAGCGGAGGAGATGCGTCGCGCCGAAGCGGAAGGCCGCGCGCACGCAAAGGGCGCGCGTACCGGTGA CGGCCGGCGCGTGCAGGGCCGCGAAGACGAGAAGTTGCAGGGCGAGCACCCTGAGGGCAACAACCCCGTTCCGCGCAAGA TCCCGGGCCGCTGA
Upstream 100 bases:
>100_bases ACCGCCGAGCCTTTGCTGAAGCGGGTTTCGGGTTTTTAGGACTCCTCCTACGCGGGGCGGCAACAGGCTCCGACTGGTGC TCTGCGGAGGGTTTCCCACA
Downstream 100 bases:
>100_bases GCCCTCGTGCGTGAAGTCCTTTTTTGTTCTTAGATCGATAGGAGATAAGTCATGAACCGTATTGATACAGGCCACGTCCT TTCCTCGAGCACCATCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MVSPQPVLIRRARSPSCTGRARASAVRNPRQETSPMKSSSSKSPGVQGEGDYASAKKYNEHARSFAQSGRTEQAAKDAAP RDPREAEEMRRAEAEGRAHAKGARTGDGRRVQGREDEKLQGEHPEGNNPVPRKIPGR
Sequences:
>Translated_137_residues MVSPQPVLIRRARSPSCTGRARASAVRNPRQETSPMKSSSSKSPGVQGEGDYASAKKYNEHARSFAQSGRTEQAAKDAAP RDPREAEEMRRAEAEGRAHAKGARTGDGRRVQGREDEKLQGEHPEGNNPVPRKIPGR >Mature_137_residues MVSPQPVLIRRARSPSCTGRARASAVRNPRQETSPMKSSSSKSPGVQGEGDYASAKKYNEHARSFAQSGRTEQAAKDAAP RDPREAEEMRRAEAEGRAHAKGARTGDGRRVQGREDEKLQGEHPEGNNPVPRKIPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14927; Mature: 14927
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPQPVLIRRARSPSCTGRARASAVRNPRQETSPMKSSSSKSPGVQGEGDYASAKKYNE CCCCCCHHHCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH HARSFAQSGRTEQAAKDAAPRDPREAEEMRRAEAEGRAHAKGARTGDGRRVQGREDEKLQ HHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCC GEHPEGNNPVPRKIPGR CCCCCCCCCCCCCCCCC >Mature Secondary Structure MVSPQPVLIRRARSPSCTGRARASAVRNPRQETSPMKSSSSKSPGVQGEGDYASAKKYNE CCCCCCHHHCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH HARSFAQSGRTEQAAKDAAPRDPREAEEMRRAEAEGRAHAKGARTGDGRRVQGREDEKLQ HHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCC GEHPEGNNPVPRKIPGR CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA