Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yhjG [H]

Identifier: 74318272

GI number: 74318272

Start: 2328534

End: 2330432

Strand: Reverse

Name: yhjG [H]

Synonym: Tbd_2254

Alternate gene names: 74318272

Gene position: 2330432-2328534 (Counterclockwise)

Preceding gene: 74318273

Following gene: 74318271

Centisome position: 80.09

GC content: 69.04

Gene sequence:

>1899_bases
ATGGCGCGGCGTGCGCTGAAATGGTTCGCGATCAGCTTCGCCGTCGTCGTCGCGGCGGTCCTCATTCTTTTTGCCCTGCC
GAACTGGAACGCGCTGCGTGATCCGATCGAGCGCCTCGTCGCCGAGAAAACCGGCCGCGAACTGCGCATCGGCGGCGACC
TGAAGGTCCGCCTCGCATGGCCGCCGGCGATCCGGATCGGCGCCGCCGACGTCAGTTTTGCCAATCCGTCCTGGGCGGCC
CAAAAGAACATGCTCGACATCGGGCAGGTCGCGTTCCACGTCGAGCTTGTCCCGCTGCTCGGCGGTGACCTGGTTTTCGC
CGACGTCCGCCTCGACCGGGCCGAGGTCGATCTCGAAAAGAGCGCCGACGGTCGCAAGAACTGGCTGCTCGACCGCGAGC
AGCGCGACGAGGAGGCGCGTGTCGTCGTCAAGCACGTCTCCGTGAGCGATGGCCGGGTGGCGTACAGCGACCCGGCCGCC
GAAACCTCGCTGCGCGCGCGCGTCGCGACTGTGCGTCCGGACGCTGGCGAGACCACCGGCGGGCTGCGCTTCGATGTCGA
GGGCCGCTACAAGGGCGAGCCGATCGTCGCCCGCGGCAGCGGTGAAAGCGTGCTCGGCCTGCGCGAACAGCAGGAGCCGT
ACCGCCTCGCGGTCGCGGGGCGCGTCGGACAGACGCGCGCGAGTGCTGCAGGCCGGATCACCAATCTGCTCAAGCCCTCC
GCGGTCGATCTGCAGATCAAAGTCGCGGGCGCGAGCCTCGGCCACCTCTATCCCTTGATCGGCACCGTATTTCCGCGCAC
GCCGCCTTACGAAACCGCGGGTCGCCTGATCCACCGTGGCAGCCTGTGGCGTTACGAGAACTTCCGCGGCCGCGTCGGCA
AGAGCGACGTCGCCGGAACCCTGCAGGTCGATCGTGCCGGCGAGCGGCCGGTACTGGCGGCGACGCTGCGTTCGGACAAG
CTCGATCTCGGCGACCTCGGGCCGGTCATCGGTGGAAGCGACGAGCCGGTGGTGGATCGCGCCGGCGGCGTGCTGCCCGA
CCGCCCGTTCTCGACCGAGCGCTGGCGGCGCATGGATGCCGATGTCCGGCTGACCGCAGGCGCGATCGCGCGCCCCGACG
CGCTGCCGATCGACAATCTCACGACCCGGCTGCGCCTCGACAACGGCGTGCTGACGCTCGACCCGCTGAAGTTCGACGCC
GCCGGCGGCACGCTCGCGGGCACGATCCGCCTCGACGGTCGACAGGGCCCGATCGAGGCGGCGGTCGACCTCGAGGCGCG
CAAGATGCAACTGGCGCGCCTGTTTCCGGACGCCCGTATCAAGAAGGCGAGGGTCGGCCGGGTCAGCGGCGACTTCGACC
TCGCCGGAAAGGGCGACTCGGTCGCCGAAATGCTCCGCAACGCCGACGGCAAGCTCGCGCTCGTCGTCGACGGCGGAACG
GTCAGCCGTTTCATGATGGAGGCGGTCGGCCTGCATCTGCTCGAGATGCTGAAGCTCACGCTTACCGGCGACGAGATCAT
CACCATCGATTGCGGCGTCGCCGATTTCGGCGTGAAAGATGGCGTCATGGAGGCGCGCAGCCTGGTGCTCGATACCGACG
TCGTGCGTATCGATGGCCGCGGCACCGTCGACCTCGGCGAAGAAAGGCTCGATCTCGAGATCGTGCCGAGGTCGAAGAAA
CTACGCGTCGCCTCCCTGCGTACCCCGATCCATATCGAGGGCCGTTTCGCCAAGCCCGACATCGGCCTCGACAAGGGCAA
GCTCGCGCTGCGCGGGCTCGGCGCGCTCGCGCTCGGTATCGTCAACCCGGCGCTGGCGCTCGCGCCGCTGATCGAAGCGA
ACACTGCGGAAGACAGCGCGTGCCGCCGCCTGATCGCCGAGGCCCGGCAGTCGCCCTGA

Upstream 100 bases:

>100_bases
GGCCTGCCCGCGCTTGCGCCAGCGGTCGAAAGCCCCGGAGGCGGCGCGTGAGCGCGTCGTCGCCCTCGGCGCTTGCGCTC
GACGGGCGTCAGCGGCGGCC

Downstream 100 bases:

>100_bases
CCCCCGCCGAGAAAAGGGGCGCGAACATGGACGAGAACAAACCTGCCAGCCCGGTGACTGCTGCCCGCGATGCGCAGTGC
GACGTTGACACGCCGGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 631

Protein sequence:

>632_residues
MARRALKWFAISFAVVVAAVLILFALPNWNALRDPIERLVAEKTGRELRIGGDLKVRLAWPPAIRIGAADVSFANPSWAA
QKNMLDIGQVAFHVELVPLLGGDLVFADVRLDRAEVDLEKSADGRKNWLLDREQRDEEARVVVKHVSVSDGRVAYSDPAA
ETSLRARVATVRPDAGETTGGLRFDVEGRYKGEPIVARGSGESVLGLREQQEPYRLAVAGRVGQTRASAAGRITNLLKPS
AVDLQIKVAGASLGHLYPLIGTVFPRTPPYETAGRLIHRGSLWRYENFRGRVGKSDVAGTLQVDRAGERPVLAATLRSDK
LDLGDLGPVIGGSDEPVVDRAGGVLPDRPFSTERWRRMDADVRLTAGAIARPDALPIDNLTTRLRLDNGVLTLDPLKFDA
AGGTLAGTIRLDGRQGPIEAAVDLEARKMQLARLFPDARIKKARVGRVSGDFDLAGKGDSVAEMLRNADGKLALVVDGGT
VSRFMMEAVGLHLLEMLKLTLTGDEIITIDCGVADFGVKDGVMEARSLVLDTDVVRIDGRGTVDLGEERLDLEIVPRSKK
LRVASLRTPIHIEGRFAKPDIGLDKGKLALRGLGALALGIVNPALALAPLIEANTAEDSACRRLIAEARQSP

Sequences:

>Translated_632_residues
MARRALKWFAISFAVVVAAVLILFALPNWNALRDPIERLVAEKTGRELRIGGDLKVRLAWPPAIRIGAADVSFANPSWAA
QKNMLDIGQVAFHVELVPLLGGDLVFADVRLDRAEVDLEKSADGRKNWLLDREQRDEEARVVVKHVSVSDGRVAYSDPAA
ETSLRARVATVRPDAGETTGGLRFDVEGRYKGEPIVARGSGESVLGLREQQEPYRLAVAGRVGQTRASAAGRITNLLKPS
AVDLQIKVAGASLGHLYPLIGTVFPRTPPYETAGRLIHRGSLWRYENFRGRVGKSDVAGTLQVDRAGERPVLAATLRSDK
LDLGDLGPVIGGSDEPVVDRAGGVLPDRPFSTERWRRMDADVRLTAGAIARPDALPIDNLTTRLRLDNGVLTLDPLKFDA
AGGTLAGTIRLDGRQGPIEAAVDLEARKMQLARLFPDARIKKARVGRVSGDFDLAGKGDSVAEMLRNADGKLALVVDGGT
VSRFMMEAVGLHLLEMLKLTLTGDEIITIDCGVADFGVKDGVMEARSLVLDTDVVRIDGRGTVDLGEERLDLEIVPRSKK
LRVASLRTPIHIEGRFAKPDIGLDKGKLALRGLGALALGIVNPALALAPLIEANTAEDSACRRLIAEARQSP
>Mature_631_residues
ARRALKWFAISFAVVVAAVLILFALPNWNALRDPIERLVAEKTGRELRIGGDLKVRLAWPPAIRIGAADVSFANPSWAAQ
KNMLDIGQVAFHVELVPLLGGDLVFADVRLDRAEVDLEKSADGRKNWLLDREQRDEEARVVVKHVSVSDGRVAYSDPAAE
TSLRARVATVRPDAGETTGGLRFDVEGRYKGEPIVARGSGESVLGLREQQEPYRLAVAGRVGQTRASAAGRITNLLKPSA
VDLQIKVAGASLGHLYPLIGTVFPRTPPYETAGRLIHRGSLWRYENFRGRVGKSDVAGTLQVDRAGERPVLAATLRSDKL
DLGDLGPVIGGSDEPVVDRAGGVLPDRPFSTERWRRMDADVRLTAGAIARPDALPIDNLTTRLRLDNGVLTLDPLKFDAA
GGTLAGTIRLDGRQGPIEAAVDLEARKMQLARLFPDARIKKARVGRVSGDFDLAGKGDSVAEMLRNADGKLALVVDGGTV
SRFMMEAVGLHLLEMLKLTLTGDEIITIDCGVADFGVKDGVMEARSLVLDTDVVRIDGRGTVDLGEERLDLEIVPRSKKL
RVASLRTPIHIEGRFAKPDIGLDKGKLALRGLGALALGIVNPALALAPLIEANTAEDSACRRLIAEARQSP

Specific function: Unknown

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510981, Length=675, Percent_Identity=31.2592592592593, Blast_Score=327, Evalue=2e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 68149; Mature: 68018

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRALKWFAISFAVVVAAVLILFALPNWNALRDPIERLVAEKTGRELRIGGDLKVRLAW
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEC
PPAIRIGAADVSFANPSWAAQKNMLDIGQVAFHVELVPLLGGDLVFADVRLDRAEVDLEK
CCCEEEECCCCCCCCCCHHHHCCCHHHCCEEEEEEEEEECCCCEEEEEEEECHHHCCHHC
SADGRKNWLLDREQRDEEARVVVKHVSVSDGRVAYSDPAAETSLRARVATVRPDAGETTG
CCCCCCCCCCCCHHCCCCCEEEEEEEECCCCEEEECCCCCHHHHHEEEEEECCCCCCCCC
GLRFDVEGRYKGEPIVARGSGESVLGLREQQEPYRLAVAGRVGQTRASAAGRITNLLKPS
CEEEEECCCCCCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
AVDLQIKVAGASLGHLYPLIGTVFPRTPPYETAGRLIHRGSLWRYENFRGRVGKSDVAGT
CEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHEEECCCCEEECCCCCCCCCCCCCEE
LQVDRAGERPVLAATLRSDKLDLGDLGPVIGGSDEPVVDRAGGVLPDRPFSTERWRRMDA
EEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCCC
DVRLTAGAIARPDALPIDNLTTRLRLDNGVLTLDPLKFDAAGGTLAGTIRLDGRQGPIEA
CEEEEECCCCCCCCCCCCCCEEEEEECCCEEEECCCEEECCCCEEEEEEEECCCCCCCEE
AVDLEARKMQLARLFPDARIKKARVGRVSGDFDLAGKGDSVAEMLRNADGKLALVVDGGT
EECCHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCEEEEECCCH
VSRFMMEAVGLHLLEMLKLTLTGDEIITIDCGVADFGVKDGVMEARSLVLDTDVVRIDGR
HHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCHHHHHHEEEECEEEEECCC
GTVDLGEERLDLEIVPRSKKLRVASLRTPIHIEGRFAKPDIGLDKGKLALRGLGALALGI
CCEECCCCCEEEEEECCCCCEEEEECCCCEEEECEECCCCCCCCCCCCHHHHHHHHHHHH
VNPALALAPLIEANTAEDSACRRLIAEARQSP
HCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARRALKWFAISFAVVVAAVLILFALPNWNALRDPIERLVAEKTGRELRIGGDLKVRLAW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEC
PPAIRIGAADVSFANPSWAAQKNMLDIGQVAFHVELVPLLGGDLVFADVRLDRAEVDLEK
CCCEEEECCCCCCCCCCHHHHCCCHHHCCEEEEEEEEEECCCCEEEEEEEECHHHCCHHC
SADGRKNWLLDREQRDEEARVVVKHVSVSDGRVAYSDPAAETSLRARVATVRPDAGETTG
CCCCCCCCCCCCHHCCCCCEEEEEEEECCCCEEEECCCCCHHHHHEEEEEECCCCCCCCC
GLRFDVEGRYKGEPIVARGSGESVLGLREQQEPYRLAVAGRVGQTRASAAGRITNLLKPS
CEEEEECCCCCCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
AVDLQIKVAGASLGHLYPLIGTVFPRTPPYETAGRLIHRGSLWRYENFRGRVGKSDVAGT
CEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHEEECCCCEEECCCCCCCCCCCCCEE
LQVDRAGERPVLAATLRSDKLDLGDLGPVIGGSDEPVVDRAGGVLPDRPFSTERWRRMDA
EEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCCC
DVRLTAGAIARPDALPIDNLTTRLRLDNGVLTLDPLKFDAAGGTLAGTIRLDGRQGPIEA
CEEEEECCCCCCCCCCCCCCEEEEEECCCEEEECCCEEECCCCEEEEEEEECCCCCCCEE
AVDLEARKMQLARLFPDARIKKARVGRVSGDFDLAGKGDSVAEMLRNADGKLALVVDGGT
EECCHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCEEEEECCCH
VSRFMMEAVGLHLLEMLKLTLTGDEIITIDCGVADFGVKDGVMEARSLVLDTDVVRIDGR
HHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCHHHHHHEEEECEEEEECCC
GTVDLGEERLDLEIVPRSKKLRVASLRTPIHIEGRFAKPDIGLDKGKLALRGLGALALGI
CCEECCCCCEEEEEECCCCCEEEEECCCCEEEECEECCCCCCCCCCCCHHHHHHHHHHHH
VNPALALAPLIEANTAEDSACRRLIAEARQSP
HCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]