Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318256

Identifier: 74318256

GI number: 74318256

Start: 2315954

End: 2316121

Strand: Reverse

Name: 74318256

Synonym: Tbd_2238

Alternate gene names: NA

Gene position: 2316121-2315954 (Counterclockwise)

Preceding gene: 74318257

Following gene: 74318255

Centisome position: 79.6

GC content: 52.38

Gene sequence:

>168_bases
TTGATGTTGTACTATGCGTTGGTATTCTTCATCATCGCCATTGTGGCGGCCGTGTTCGGGTTCTCCGGAATCGCGGCAGG
TGCGGTAGGCATCGCAAAGATTCTTTTTGTCGTCTTTCTAATAATGGCAATCGCGACGTTCGTGGTGAACCTGCTGCGTG
GGCGCTAG

Upstream 100 bases:

>100_bases
CGGGCCCGGCTCAGGCTGATGGCTCACGCTTGCCATGTGTTTAGTCTTTGAGACACGGCAGATCTGATCGGCACTCATCC
CCAGGTCTATCGAGGAGAAT

Downstream 100 bases:

>100_bases
CAGGCGCGAAAATACCGGATCGATCGTAGCGGCATTGCCACGGAGCGCTACATGATTCAGGTTGCCATCGTCGATGACCA
TCAAATCGTCCGGACCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MMLYYALVFFIIAIVAAVFGFSGIAAGAVGIAKILFVVFLIMAIATFVVNLLRGR

Sequences:

>Translated_55_residues
MMLYYALVFFIIAIVAAVFGFSGIAAGAVGIAKILFVVFLIMAIATFVVNLLRGR
>Mature_55_residues
MMLYYALVFFIIAIVAAVFGFSGIAAGAVGIAKILFVVFLIMAIATFVVNLLRGR

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009760 [H]

Pfam domain/function: PF07043 DUF1328 [H]

EC number: NA

Molecular weight: Translated: 5884; Mature: 5884

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLYYALVFFIIAIVAAVFGFSGIAAGAVGIAKILFVVFLIMAIATFVVNLLRGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMLYYALVFFIIAIVAAVFGFSGIAAGAVGIAKILFVVFLIMAIATFVVNLLRGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA