Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yqiK [H]

Identifier: 74318236

GI number: 74318236

Start: 2296398

End: 2298074

Strand: Reverse

Name: yqiK [H]

Synonym: Tbd_2218

Alternate gene names: 74318236

Gene position: 2298074-2296398 (Counterclockwise)

Preceding gene: 74318237

Following gene: 74318235

Centisome position: 78.98

GC content: 62.13

Gene sequence:

>1677_bases
ATGCTGGAAAATCTGTATCCCGCGCTCATGCTGGGGGCGGTCGTTTTGCTGGCCATTCTGGTCATTGGCATCATCATCGT
GCGCCTCTACCAGCGCGCCTCGAAGGAGCTTTCTTTCGTTCGCACCGGGCTCGGCGGGCAGAAGGTGGTCATGGACGGCG
GCGCGATCGTGCTGCCCGGCTTCCATCAGATCATTCCGGTCAATATGAACACGCTGAAGCTGGAGGTTGCGCGCAGCGGC
AAGGACAGCTTGTTCACCAAGGATCGGATGCGGGTGGACGCGGTTGCAGCATTCTTCGTGCGGGTGCGTCCCATGCTTGA
GGGCATCGCGCAGGCCGCGCAGACGCTGGGGCAACGAACAATGGACCCGACTGCACTGAAGGAGTTGATCGAGGACAAGT
TCGTCGATTCGCTGCGCGCGGCAGCCGTGTCGATGACGATGCAGGAGCTGCTCGACATGCGTCAGGACTTCATACAGGCG
GTGCAGAACACCGTGCAGGAAGACCTGATGAAGAACGGGCTTGAGCTGGAGTCGGTTTCGCTGACCCGGATCGACCAGAC
GGCGATGCAGTTCTTCGACCCCAACAATGCCTTCGATGCCGAGGGTTTGACCAAACTCACCGAAGAAACCCAGTTGCGAG
CCAAACAGCGCAATGACATCGAGCAGGACACGGCGGTGCAGATCGCCGAGAAGAACTTCATGACCAAGCAGGAGCAATTG
CGCATTGCGCAGCAGCAGACTTTTGCCGTGCTCTCCCAAGAACAGGAAGTGGCCAACCGACAGGCGGAGCAGAGTGCCCA
GGTGGCGGGATTCGAGGCAGCCAAGAAGCAGGAATCCGAACAGGCGCGCATCACCGCCGAGCGACAGATCAAGGAAGCCG
AGGTCGAACGTGACCGCAGCGTCCAACAGCGGCAGATCGAGGCCGAACGTGGGCTGAAAGTCGCAGCGATCGAACAGCAG
CGCTCGATCGAGATCGCCGAGCAGGAACGTGCGATCGCCATCGCGCAGAAATCCGAGCAGCAGTCGGTCGCCGAGGCGCA
GGCCAACCTGGCGCGTGCCGAATCGGTCAAGGCGGCACAAAGCGTGGTCACCGCGGAAGAGGTGGCACGTGCCGAACGCG
AAAAGCAGGTGGCGATGGTGAAGGCGGACGAAGATGCCCAGCGTCGGGCGATCGAGTTGACCGTGGCAGCCGAGGCAGAG
CGGCAGGCAGCCGAAGATCGCGCACAGGCGATCCGTACGCTGGCCGAGGCGAATGCCACCAACTATGAGGTCGAAGCCGA
GGGCAAGCGCAAGCTCAACGATGCCGTCAACGTGCTCTCGCCCGAGCAGATCGCGATGAACGTCAAGCTGGAATTGATCC
GTGCCCTGCCCGAAATCATTGCCGCCTCGGTCAAGCCGATCGAGCGCATCGACGGCATCAAGATCATTCAGGTGGATGGG
TTGAATCGCGGCAGTGCCGCCGGCGCGGCCAGTGCGGGGCTTGGCGCATCGGCTACTGGCAACCTCGCCGAGCAGGCCGT
ATCGGCTGCGCTGGCCTACCGAGCGCAGCAGCCGCTGATCGACTCCCTGCTCAGCGAGGTTGGCCTCAAGGAAGGGGTGT
CCGCGCGGCTGGACGCATCGCTTTTTACGCCGAACGCTTCCGTCAAGACTGAGCGCGTACCGGAGCTGGAAGAATGA

Upstream 100 bases:

>100_bases
GCCGGGGAACGTGTGCTGCTGCTGCGTGAGTTGAGCGCTGGGCGCTATCAGGCCACCCCCAATCCGATCACCGAATAATC
ACACCAAAGGGAGCAACACC

Downstream 100 bases:

>100_bases
ATATGGAAGCGCCATTGTCCGCAGCCGGTCCCTCCATGGAGTTGTCTCCGCCAGAACTTCTCGCCCCCGTGGCCAAAAGC
GAGGCCAACGACCTGGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLENLYPALMLGAVVLLAILVIGIIIVRLYQRASKELSFVRTGLGGQKVVMDGGAIVLPGFHQIIPVNMNTLKLEVARSG
KDSLFTKDRMRVDAVAAFFVRVRPMLEGIAQAAQTLGQRTMDPTALKELIEDKFVDSLRAAAVSMTMQELLDMRQDFIQA
VQNTVQEDLMKNGLELESVSLTRIDQTAMQFFDPNNAFDAEGLTKLTEETQLRAKQRNDIEQDTAVQIAEKNFMTKQEQL
RIAQQQTFAVLSQEQEVANRQAEQSAQVAGFEAAKKQESEQARITAERQIKEAEVERDRSVQQRQIEAERGLKVAAIEQQ
RSIEIAEQERAIAIAQKSEQQSVAEAQANLARAESVKAAQSVVTAEEVARAEREKQVAMVKADEDAQRRAIELTVAAEAE
RQAAEDRAQAIRTLAEANATNYEVEAEGKRKLNDAVNVLSPEQIAMNVKLELIRALPEIIAASVKPIERIDGIKIIQVDG
LNRGSAAGAASAGLGASATGNLAEQAVSAALAYRAQQPLIDSLLSEVGLKEGVSARLDASLFTPNASVKTERVPELEE

Sequences:

>Translated_558_residues
MLENLYPALMLGAVVLLAILVIGIIIVRLYQRASKELSFVRTGLGGQKVVMDGGAIVLPGFHQIIPVNMNTLKLEVARSG
KDSLFTKDRMRVDAVAAFFVRVRPMLEGIAQAAQTLGQRTMDPTALKELIEDKFVDSLRAAAVSMTMQELLDMRQDFIQA
VQNTVQEDLMKNGLELESVSLTRIDQTAMQFFDPNNAFDAEGLTKLTEETQLRAKQRNDIEQDTAVQIAEKNFMTKQEQL
RIAQQQTFAVLSQEQEVANRQAEQSAQVAGFEAAKKQESEQARITAERQIKEAEVERDRSVQQRQIEAERGLKVAAIEQQ
RSIEIAEQERAIAIAQKSEQQSVAEAQANLARAESVKAAQSVVTAEEVARAEREKQVAMVKADEDAQRRAIELTVAAEAE
RQAAEDRAQAIRTLAEANATNYEVEAEGKRKLNDAVNVLSPEQIAMNVKLELIRALPEIIAASVKPIERIDGIKIIQVDG
LNRGSAAGAASAGLGASATGNLAEQAVSAALAYRAQQPLIDSLLSEVGLKEGVSARLDASLFTPNASVKTERVPELEE
>Mature_558_residues
MLENLYPALMLGAVVLLAILVIGIIIVRLYQRASKELSFVRTGLGGQKVVMDGGAIVLPGFHQIIPVNMNTLKLEVARSG
KDSLFTKDRMRVDAVAAFFVRVRPMLEGIAQAAQTLGQRTMDPTALKELIEDKFVDSLRAAAVSMTMQELLDMRQDFIQA
VQNTVQEDLMKNGLELESVSLTRIDQTAMQFFDPNNAFDAEGLTKLTEETQLRAKQRNDIEQDTAVQIAEKNFMTKQEQL
RIAQQQTFAVLSQEQEVANRQAEQSAQVAGFEAAKKQESEQARITAERQIKEAEVERDRSVQQRQIEAERGLKVAAIEQQ
RSIEIAEQERAIAIAQKSEQQSVAEAQANLARAESVKAAQSVVTAEEVARAEREKQVAMVKADEDAQRRAIELTVAAEAE
RQAAEDRAQAIRTLAEANATNYEVEAEGKRKLNDAVNVLSPEQIAMNVKLELIRALPEIIAASVKPIERIDGIKIIQVDG
LNRGSAAGAASAGLGASATGNLAEQAVSAALAYRAQQPLIDSLLSEVGLKEGVSARLDASLFTPNASVKTERVPELEE

Specific function: Unknown

COG id: COG2268

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yuaG and Synechocystis PCC 6803 sll1021 [H]

Homologues:

Organism=Escherichia coli, GI1789430, Length=540, Percent_Identity=60.1851851851852, Blast_Score=602, Evalue=1e-173,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 61063; Mature: 61063

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENLYPALMLGAVVLLAILVIGIIIVRLYQRASKELSFVRTGLGGQKVVMDGGAIVLPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECC
FHQIIPVNMNTLKLEVARSGKDSLFTKDRMRVDAVAAFFVRVRPMLEGIAQAAQTLGQRT
CCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MDPTALKELIEDKFVDSLRAAAVSMTMQELLDMRQDFIQAVQNTVQEDLMKNGLELESVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
LTRIDQTAMQFFDPNNAFDAEGLTKLTEETQLRAKQRNDIEQDTAVQIAEKNFMTKQEQL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
RIAQQQTFAVLSQEQEVANRQAEQSAQVAGFEAAKKQESEQARITAERQIKEAEVERDRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQQRQIEAERGLKVAAIEQQRSIEIAEQERAIAIAQKSEQQSVAEAQANLARAESVKAAQ
HHHHHHHHHCCCEEEEECHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVTAEEVARAEREKQVAMVKADEDAQRRAIELTVAAEAERQAAEDRAQAIRTLAEANAT
HHHHHHHHHHHHHHHHEEEEECCCHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
NYEVEAEGKRKLNDAVNVLSPEQIAMNVKLELIRALPEIIAASVKPIERIDGIKIIQVDG
CEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEECC
LNRGSAAGAASAGLGASATGNLAEQAVSAALAYRAQQPLIDSLLSEVGLKEGVSARLDAS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHCCCCHHCCCC
LFTPNASVKTERVPELEE
EECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLENLYPALMLGAVVLLAILVIGIIIVRLYQRASKELSFVRTGLGGQKVVMDGGAIVLPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECC
FHQIIPVNMNTLKLEVARSGKDSLFTKDRMRVDAVAAFFVRVRPMLEGIAQAAQTLGQRT
CCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MDPTALKELIEDKFVDSLRAAAVSMTMQELLDMRQDFIQAVQNTVQEDLMKNGLELESVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
LTRIDQTAMQFFDPNNAFDAEGLTKLTEETQLRAKQRNDIEQDTAVQIAEKNFMTKQEQL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
RIAQQQTFAVLSQEQEVANRQAEQSAQVAGFEAAKKQESEQARITAERQIKEAEVERDRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQQRQIEAERGLKVAAIEQQRSIEIAEQERAIAIAQKSEQQSVAEAQANLARAESVKAAQ
HHHHHHHHHCCCEEEEECHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVTAEEVARAEREKQVAMVKADEDAQRRAIELTVAAEAERQAAEDRAQAIRTLAEANAT
HHHHHHHHHHHHHHHHEEEEECCCHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
NYEVEAEGKRKLNDAVNVLSPEQIAMNVKLELIRALPEIIAASVKPIERIDGIKIIQVDG
CEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEECC
LNRGSAAGAASAGLGASATGNLAEQAVSAALAYRAQQPLIDSLLSEVGLKEGVSARLDAS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHCCCCHHCCCC
LFTPNASVKTERVPELEE
EECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]