| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is yqiJ [H]
Identifier: 74318237
GI number: 74318237
Start: 2298097
End: 2298708
Strand: Reverse
Name: yqiJ [H]
Synonym: Tbd_2219
Alternate gene names: 74318237
Gene position: 2298708-2298097 (Counterclockwise)
Preceding gene: 74318238
Following gene: 74318236
Centisome position: 79.0
GC content: 63.56
Gene sequence:
>612_bases ATGGAGTTTCTGCTCAGCGAGGGGAACTGGCTATTCTCGGCCGCGCTGGTAGTGGTGGTCGGCATCGGCGCGCTCGAATT GTTCGCGCTCGCAGTCGGTGGGTCGCTGTCGTCCGTCGTCGATGGCTTCGTCGGTGAGGCCCCGGATGGCGGAGGCTTGG CCTGGTTACACGTCGGACGATTACCTTTCCTGGTGATCCTGGTTCTATTTCTCACCTTGTTTTCGCTGCTGGGGTTTGCG CTCCAAGGCGTGGCGGCCGCGGTACTCGGACAGGCGCTCCCTGCACTTGCAGCATCACCGCTGGCGCTGGTTGGTACTCT ACCGGCGACGCGTGCGGTCGGTTTCACGCTTTCTCGCGCCATGCCGCGTGATGAGTCCGCGGCGATCGCCGCATCCAGTT TCGTCGGGCGCACTGCCGTGGTCACGGCAGGGGAGGCTCGGCCTGGCAAATCCGCCGAAGCCCGTTTTCAGGACGAATAT GGGCAGACGCACTACGTGATGGTGGAGCCTGCCGCAGACTCGCCCAATCTTGGTGCCGGGGAACGTGTGCTGCTGCTGCG TGAGTTGAGCGCTGGGCGCTATCAGGCCACCCCCAATCCGATCACCGAATAA
Upstream 100 bases:
>100_bases TTTGACCCCCCGTCGCCCGAAATGGTGAGTGTCGTGGATTCCGCCCACAGCGATGGCGGAACACGCCGACGTCTTAAAGA AAACACATAAGGGGGGATCG
Downstream 100 bases:
>100_bases TCACACCAAAGGGAGCAACACCATGCTGGAAAATCTGTATCCCGCGCTCATGCTGGGGGCGGTCGTTTTGCTGGCCATTC TGGTCATTGGCATCATCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEFLLSEGNWLFSAALVVVVGIGALELFALAVGGSLSSVVDGFVGEAPDGGGLAWLHVGRLPFLVILVLFLTLFSLLGFA LQGVAAAVLGQALPALAASPLALVGTLPATRAVGFTLSRAMPRDESAAIAASSFVGRTAVVTAGEARPGKSAEARFQDEY GQTHYVMVEPAADSPNLGAGERVLLLRELSAGRYQATPNPITE
Sequences:
>Translated_203_residues MEFLLSEGNWLFSAALVVVVGIGALELFALAVGGSLSSVVDGFVGEAPDGGGLAWLHVGRLPFLVILVLFLTLFSLLGFA LQGVAAAVLGQALPALAASPLALVGTLPATRAVGFTLSRAMPRDESAAIAASSFVGRTAVVTAGEARPGKSAEARFQDEY GQTHYVMVEPAADSPNLGAGERVLLLRELSAGRYQATPNPITE >Mature_203_residues MEFLLSEGNWLFSAALVVVVGIGALELFALAVGGSLSSVVDGFVGEAPDGGGLAWLHVGRLPFLVILVLFLTLFSLLGFA LQGVAAAVLGQALPALAASPLALVGTLPATRAVGFTLSRAMPRDESAAIAASSFVGRTAVVTAGEARPGKSAEARFQDEY GQTHYVMVEPAADSPNLGAGERVLLLRELSAGRYQATPNPITE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789429, Length=197, Percent_Identity=33.502538071066, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010840 [H]
Pfam domain/function: PF07290 DUF1449 [H]
EC number: NA
Molecular weight: Translated: 20862; Mature: 20862
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLLSEGNWLFSAALVVVVGIGALELFALAVGGSLSSVVDGFVGEAPDGGGLAWLHVGR CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEHHH LPFLVILVLFLTLFSLLGFALQGVAAAVLGQALPALAASPLALVGTLPATRAVGFTLSRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHC MPRDESAAIAASSFVGRTAVVTAGEARPGKSAEARFQDEYGQTHYVMVEPAADSPNLGAG CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCC ERVLLLRELSAGRYQATPNPITE CCEEEEEHHCCCCEECCCCCCCC >Mature Secondary Structure MEFLLSEGNWLFSAALVVVVGIGALELFALAVGGSLSSVVDGFVGEAPDGGGLAWLHVGR CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEHHH LPFLVILVLFLTLFSLLGFALQGVAAAVLGQALPALAASPLALVGTLPATRAVGFTLSRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHC MPRDESAAIAASSFVGRTAVVTAGEARPGKSAEARFQDEYGQTHYVMVEPAADSPNLGAG CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCC ERVLLLRELSAGRYQATPNPITE CCEEEEEHHCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]