| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yeeE [H]
Identifier: 74318219
GI number: 74318219
Start: 2281645
End: 2282907
Strand: Reverse
Name: yeeE [H]
Synonym: Tbd_2201
Alternate gene names: 74318219
Gene position: 2282907-2281645 (Counterclockwise)
Preceding gene: 74318220
Following gene: 74318218
Centisome position: 78.46
GC content: 63.74
Gene sequence:
>1263_bases ATGACTTATGAAGATTTCGCAAGCGCCCAATCGTTCTTACTGTGGTCGACCTTCGCGGTCGCCCTCGTCATGGGCGCGGT CGTCAACAAGACCAATTTCTGCACCATGGGCGCCGTGTCCGACTGGGTCAACATGGGCGACACCGGACGCATGCGCGCCT GGGTCCTCGCGATCGCGGTCGGCGTGCTCGGCGTCATGGGCCTCGAGGCCGCCGGTCTCGTGAATGTCACGAATACCTTC CCACCGTACCGCCAGAACAATTTCCCCTGGCTCGAAAACCTGCTCGGCGGCGCGCTCTTCGGAATAGGCATGGTGCTCGC CTCGGGTTGCGGCAACAAGACCCTGGTCCGCATCGGCGGCGGCAACCTCAAGTCGGTCATGGTGTTCCTGGTCATCGCCG TGATCGCCTATTTCATGATCAACCCCTTCCCGGGCAGCGACAAGACCCTGTACTCGACGCTGTTCTACGGCTGGACCAAC CCGACCGCCGTCTCCTTGACCACCAACCAGGATCTCGGCGCGATGCTGTTCGCGGAGAACGCCGACACCGGCCGCATGGT CATGGGCGCGGTCATCGGCGGCCTGCTGCTGATCTGGGCGTTCAAGTCGGCCGAATTCCGCAGCAGCTTCGACAACATCC TCGGCGGCCTCGTCGTCGGCCTCGCCGTGCTTGCGGCCTGGTATATCACGAGCAACGTCATGGTCGACGCTGACGGCGAG ATCATGTCGCTGCAGACCTACGTGCAGGACTGGGACCTCTACGCGCCCGCCGATGCGGTTCGCCCCGCCGCCGCCGGCCC GCTCGCCTCGCAGTCGTTCACCTTCATCAACCCGATGGGCCAGTCTCTTGGCTACGCGACCAACGGCTTCGACCGCACTC TGCTCACCTTTGGCATCATGGCGCTCGCCGGCGTCGTCGCCGGCTCGCTGCTGTGGGCGCTCATTTCGCGCAGCTTCCGC TTCGAATGGTTCGCCTCGGTGCGCGACTTCTTCAATCATCTCGTCGGTGCAGTCCTCATGGGCTTCGGCGGCGTTCTCGC CATGGGCTGCACGATCGGTCAGGGCGTCACGGGCTTCTCCACCCTGGCGATCGGGTCCATTCTGACCTTCGTCGCGATCG TGCTTGGCAGCGCCGTGACGATGAAAGTGCAGTACTACAAGATGGTGTACGAGAGCGAGGCGACCTTCCTCAAGGCCTTC GTCACCGCGCTCGCCGACCTTCGGCTGCTGCCGGCCGGAATGCGCAAGCTGGAAGCGGTTTAA
Upstream 100 bases:
>100_bases ACTTATTATCCAGCCTGGCCTTGGCGCGAACGCATTATGATTCTGCCTTTGGCAGAGCACGCGGCAGCAGCTCGCCTCCC CGACGAGAGGAGACAGACTC
Downstream 100 bases:
>100_bases AGCACATCCGGCTTTGACGACGATTCAAAATTAAGTATAATTTCGGGCTTTGCCGGACACCAAACGTGTCAGACAAAGCG GGTCGGTAGCTCAGCCGGTA
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAVGVLGVMGLEAAGLVNVTNTF PPYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGGGNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTN PTAVSLTTNQDLGAMLFAENADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGE IMSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIMALAGVVAGSLLWALISRSFR FEWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFSTLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAF VTALADLRLLPAGMRKLEAV
Sequences:
>Translated_420_residues MTYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAVGVLGVMGLEAAGLVNVTNTF PPYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGGGNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTN PTAVSLTTNQDLGAMLFAENADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGE IMSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIMALAGVVAGSLLWALISRSFR FEWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFSTLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAF VTALADLRLLPAGMRKLEAV >Mature_419_residues TYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAVGVLGVMGLEAAGLVNVTNTFP PYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGGGNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTNP TAVSLTTNQDLGAMLFAENADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGEI MSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIMALAGVVAGSLLWALISRSFRF EWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFSTLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAFV TALADLRLLPAGMRKLEAV
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
Organism=Escherichia coli, GI1788323, Length=341, Percent_Identity=24.9266862170088, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 44831; Mature: 44700
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCCHHHHHHHHHHH GVLGVMGLEAAGLVNVTNTFPPYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGG HHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC GNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTNPTAVSLTTNQDLGAMLFAEN CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECC ADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGE CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC IMSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIM CHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEECHHHHHCCCCCCCHHHHHHHHHHH ALAGVVAGSLLWALISRSFRFEWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAFVTALADLRLLPAGMRKLEAV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCCHHHHHHHHHHH GVLGVMGLEAAGLVNVTNTFPPYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGG HHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC GNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTNPTAVSLTTNQDLGAMLFAEN CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECC ADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGE CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC IMSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIM CHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEECHHHHHCCCCCCCHHHHHHHHHHH ALAGVVAGSLLWALISRSFRFEWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAFVTALADLRLLPAGMRKLEAV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]