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The map label for this gene is fimA [H]

Identifier: 74318218

GI number: 74318218

Start: 2280878

End: 2281213

Strand: Reverse

Name: fimA [H]

Synonym: Tbd_2200

Alternate gene names: 74318218

Gene position: 2281213-2280878 (Counterclockwise)

Preceding gene: 74318219

Following gene: 74318217

Centisome position: 78.4

GC content: 55.36

Gene sequence:

>336_bases
ATGCGCAAGATTCAAAAAGGCTTCACCCTGATCGAACTGATGATCGTCGTGGCGATTATCGGTATTCTGGCCGCCGTGGC
CATTCCTGCTTACAGTCAGTATGTCGACAAGTCGAAGGTCAGTGCCTGCAAGGCCGAGGCTGTGGCTTACGCCCGTATCG
CCCTCGCCGAAGCATCCCAGAACAACTCGATTCCCGCTGCCAACGTGGCAGCCTGTGCGACTATCGACGACACCACGGCG
GGCAAGAATAAAACGGTCTATGCGGCCTTTACCGCGACTGCAAAGGACAGCAAACCCACCACTATTAGCTGCGATGCCAA
CGCCAACTGTAAGTAA

Upstream 100 bases:

>100_bases
GGTGAAGCTTCTTTTTTCCTAAAGTTGGCACGGCGTCTGCTCGTTAATGCGTCAGACACGGCAACTCGTGTTTACCTGCC
CCCATCCAAGGAGATATCAA

Downstream 100 bases:

>100_bases
GTCTTCTGCGTTCAAAAAAGCCCCTCTTCGGAGGGGCTTTTTTGTCTGGGGCACTGTGAGCAGATGTTGCGGACCGAGGG
GATCGGGGAATGTGCAAACG

Product: pilus assembly protein PilA

Products: NA

Alternate protein names: 238 antigen; Pilin; Serogroup G1 [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MRKIQKGFTLIELMIVVAIIGILAAVAIPAYSQYVDKSKVSACKAEAVAYARIALAEASQNNSIPAANVAACATIDDTTA
GKNKTVYAAFTATAKDSKPTTISCDANANCK

Sequences:

>Translated_111_residues
MRKIQKGFTLIELMIVVAIIGILAAVAIPAYSQYVDKSKVSACKAEAVAYARIALAEASQNNSIPAANVAACATIDDTTA
GKNKTVYAAFTATAKDSKPTTISCDANANCK
>Mature_111_residues
MRKIQKGFTLIELMIVVAIIGILAAVAIPAYSQYVDKSKVSACKAEAVAYARIALAEASQNNSIPAANVAACATIDDTTA
GKNKTVYAAFTATAKDSKPTTISCDANANCK

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002416
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 11515; Mature: 11515

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIQKGFTLIELMIVVAIIGILAAVAIPAYSQYVDKSKVSACKAEAVAYARIALAEASQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NNSIPAANVAACATIDDTTAGKNKTVYAAFTATAKDSKPTTISCDANANCK
CCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MRKIQKGFTLIELMIVVAIIGILAAVAIPAYSQYVDKSKVSACKAEAVAYARIALAEASQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NNSIPAANVAACATIDDTTAGKNKTVYAAFTATAKDSKPTTISCDANANCK
CCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2889185; 1675419 [H]