Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is yeeE [H]

Identifier: 74318219

GI number: 74318219

Start: 2281645

End: 2282907

Strand: Reverse

Name: yeeE [H]

Synonym: Tbd_2201

Alternate gene names: 74318219

Gene position: 2282907-2281645 (Counterclockwise)

Preceding gene: 74318220

Following gene: 74318218

Centisome position: 78.46

GC content: 63.74

Gene sequence:

>1263_bases
ATGACTTATGAAGATTTCGCAAGCGCCCAATCGTTCTTACTGTGGTCGACCTTCGCGGTCGCCCTCGTCATGGGCGCGGT
CGTCAACAAGACCAATTTCTGCACCATGGGCGCCGTGTCCGACTGGGTCAACATGGGCGACACCGGACGCATGCGCGCCT
GGGTCCTCGCGATCGCGGTCGGCGTGCTCGGCGTCATGGGCCTCGAGGCCGCCGGTCTCGTGAATGTCACGAATACCTTC
CCACCGTACCGCCAGAACAATTTCCCCTGGCTCGAAAACCTGCTCGGCGGCGCGCTCTTCGGAATAGGCATGGTGCTCGC
CTCGGGTTGCGGCAACAAGACCCTGGTCCGCATCGGCGGCGGCAACCTCAAGTCGGTCATGGTGTTCCTGGTCATCGCCG
TGATCGCCTATTTCATGATCAACCCCTTCCCGGGCAGCGACAAGACCCTGTACTCGACGCTGTTCTACGGCTGGACCAAC
CCGACCGCCGTCTCCTTGACCACCAACCAGGATCTCGGCGCGATGCTGTTCGCGGAGAACGCCGACACCGGCCGCATGGT
CATGGGCGCGGTCATCGGCGGCCTGCTGCTGATCTGGGCGTTCAAGTCGGCCGAATTCCGCAGCAGCTTCGACAACATCC
TCGGCGGCCTCGTCGTCGGCCTCGCCGTGCTTGCGGCCTGGTATATCACGAGCAACGTCATGGTCGACGCTGACGGCGAG
ATCATGTCGCTGCAGACCTACGTGCAGGACTGGGACCTCTACGCGCCCGCCGATGCGGTTCGCCCCGCCGCCGCCGGCCC
GCTCGCCTCGCAGTCGTTCACCTTCATCAACCCGATGGGCCAGTCTCTTGGCTACGCGACCAACGGCTTCGACCGCACTC
TGCTCACCTTTGGCATCATGGCGCTCGCCGGCGTCGTCGCCGGCTCGCTGCTGTGGGCGCTCATTTCGCGCAGCTTCCGC
TTCGAATGGTTCGCCTCGGTGCGCGACTTCTTCAATCATCTCGTCGGTGCAGTCCTCATGGGCTTCGGCGGCGTTCTCGC
CATGGGCTGCACGATCGGTCAGGGCGTCACGGGCTTCTCCACCCTGGCGATCGGGTCCATTCTGACCTTCGTCGCGATCG
TGCTTGGCAGCGCCGTGACGATGAAAGTGCAGTACTACAAGATGGTGTACGAGAGCGAGGCGACCTTCCTCAAGGCCTTC
GTCACCGCGCTCGCCGACCTTCGGCTGCTGCCGGCCGGAATGCGCAAGCTGGAAGCGGTTTAA

Upstream 100 bases:

>100_bases
ACTTATTATCCAGCCTGGCCTTGGCGCGAACGCATTATGATTCTGCCTTTGGCAGAGCACGCGGCAGCAGCTCGCCTCCC
CGACGAGAGGAGACAGACTC

Downstream 100 bases:

>100_bases
AGCACATCCGGCTTTGACGACGATTCAAAATTAAGTATAATTTCGGGCTTTGCCGGACACCAAACGTGTCAGACAAAGCG
GGTCGGTAGCTCAGCCGGTA

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MTYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAVGVLGVMGLEAAGLVNVTNTF
PPYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGGGNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTN
PTAVSLTTNQDLGAMLFAENADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGE
IMSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIMALAGVVAGSLLWALISRSFR
FEWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFSTLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAF
VTALADLRLLPAGMRKLEAV

Sequences:

>Translated_420_residues
MTYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAVGVLGVMGLEAAGLVNVTNTF
PPYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGGGNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTN
PTAVSLTTNQDLGAMLFAENADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGE
IMSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIMALAGVVAGSLLWALISRSFR
FEWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFSTLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAF
VTALADLRLLPAGMRKLEAV
>Mature_419_residues
TYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAVGVLGVMGLEAAGLVNVTNTFP
PYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGGGNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTNP
TAVSLTTNQDLGAMLFAENADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGEI
MSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIMALAGVVAGSLLWALISRSFRF
EWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFSTLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAFV
TALADLRLLPAGMRKLEAV

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788323, Length=341, Percent_Identity=24.9266862170088, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 44831; Mature: 44700

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCCHHHHHHHHHHH
GVLGVMGLEAAGLVNVTNTFPPYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGG
HHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
GNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTNPTAVSLTTNQDLGAMLFAEN
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECC
ADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGE
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
IMSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIM
CHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEECHHHHHCCCCCCCHHHHHHHHHHH
ALAGVVAGSLLWALISRSFRFEWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAFVTALADLRLLPAGMRKLEAV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TYEDFASAQSFLLWSTFAVALVMGAVVNKTNFCTMGAVSDWVNMGDTGRMRAWVLAIAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCCHHHHHHHHHHH
GVLGVMGLEAAGLVNVTNTFPPYRQNNFPWLENLLGGALFGIGMVLASGCGNKTLVRIGG
HHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
GNLKSVMVFLVIAVIAYFMINPFPGSDKTLYSTLFYGWTNPTAVSLTTNQDLGAMLFAEN
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECC
ADTGRMVMGAVIGGLLLIWAFKSAEFRSSFDNILGGLVVGLAVLAAWYITSNVMVDADGE
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
IMSLQTYVQDWDLYAPADAVRPAAAGPLASQSFTFINPMGQSLGYATNGFDRTLLTFGIM
CHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEECHHHHHCCCCCCCHHHHHHHHHHH
ALAGVVAGSLLWALISRSFRFEWFASVRDFFNHLVGAVLMGFGGVLAMGCTIGQGVTGFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TLAIGSILTFVAIVLGSAVTMKVQYYKMVYESEATFLKAFVTALADLRLLPAGMRKLEAV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]