| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74318214
Identifier: 74318214
GI number: 74318214
Start: 2276489
End: 2277379
Strand: Reverse
Name: 74318214
Synonym: Tbd_2196
Alternate gene names: NA
Gene position: 2277379-2276489 (Counterclockwise)
Preceding gene: 74318217
Following gene: 74318206
Centisome position: 78.27
GC content: 66.78
Gene sequence:
>891_bases ATGATTACAAAAGAAAAAATGCGCCTGGATCTCAAATGGGCGACGCGCCAGCGGCTGCAGTACATTGAAATCATGGCTTG GTACGCGGGGGTCGTGACGCGCAGCGACGTCGCCCGCGCCTTCGGACTCTCAGACCCGGCGGCGACCAAGGACCTCAAGC TCTACAGCGATCTCGCCCCCGGCAACCTGGCCTACAATCACGGCGTATTTGGCTTCGTCCCGGCCCATGGCTTTGCCGCG GCGTTCGCCGACCTCAGCCCCGCGCGCGCCCTGCCCGTGATCGCGGCGAATCTCGCGGTCGCGAACGGGCCGTACGGCGA CACGCTGATCTACGGCCTGCCGACCGCCTCGCTGCCGCTCCCGGTGCGCCTGCCCAGCGCGCATACGCTCGCCGCGATCA CCCGGGCGATCCACGGCAGGCGCAAGCTGAGGGTGACTTACCGTTCGCTTTCGGGACGCGACAATCAAGAGCCGCGCCTC CTCGAGCCGCACACCCTGGTCGACACCGGCCTGCGCTGGCACGTCCGCGCTTATAGCGAGGACGGCTGCGACTTTCGCGA TTTCGTGCTGTCCAGGATCGTCGACGCCGAGTGCCTGGACGCGCCTGCCGAATCGGGCGGGCAGTACGACGACGACTGGG TCGAGCAGGTGACGCTGCAACTCGTCCCCCATTCGGGCCTCGACCCGGCGCGCCGCGAGAATCTGCTGCTCGATTACGGC GCGTCCGGCGAAGTCATCGAAGTGACGGTGCGGCGCGCGCTTCTGGGTTATGTCCTGCAGCGCCTCGCCGTCGACACGAC GGCCGACCACAGCCTGAACCCGCACGCCAACCAGCTGATGCTGCTCAACCGTGAGGAGATCGAACCGTTCGCGGCGTGGG CGTTTCGATAG
Upstream 100 bases:
>100_bases TAAAAAATATCACCTGTATAGAAAATACTGTCTAATCGTTCCGTATAGGCGTGGTGCGGCCCTATAATCCCAGGCCACGA CCGCAAGCGGAGCGAGCGAC
Downstream 100 bases:
>100_bases AGTCAGGGGTCGGGACTCAGGGGGTAAAAGGCAGGGGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGG CAGGAGGCAGGAGGCAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAPGNLAYNHGVFGFVPAHGFAA AFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPLPVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRL LEPHTLVDTGLRWHVRAYSEDGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR
Sequences:
>Translated_296_residues MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAPGNLAYNHGVFGFVPAHGFAA AFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPLPVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRL LEPHTLVDTGLRWHVRAYSEDGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR >Mature_296_residues MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAPGNLAYNHGVFGFVPAHGFAA AFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPLPVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRL LEPHTLVDTGLRWHVRAYSEDGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32783; Mature: 32783
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAP CCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC GNLAYNHGVFGFVPAHGFAAAFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPL CCEEECCCCEEEECCCHHHHHHHCCCCHHHHHHHEEHEEECCCCCCCEEEEECCCCCCCC PVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRLLEPHTLVDTGLRWHVRAYSE EEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEECCCHHHHCCCEEEEEEECC DGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG CCCCHHHHHHHHHHCHHHHCCCHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCEEEEEC ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHCCC >Mature Secondary Structure MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAP CCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC GNLAYNHGVFGFVPAHGFAAAFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPL CCEEECCCCEEEECCCHHHHHHHCCCCHHHHHHHEEHEEECCCCCCCEEEEECCCCCCCC PVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRLLEPHTLVDTGLRWHVRAYSE EEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEECCCHHHHCCCEEEEEEECC DGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG CCCCHHHHHHHHHHCHHHHCCCHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCEEEEEC ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA