Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318214

Identifier: 74318214

GI number: 74318214

Start: 2276489

End: 2277379

Strand: Reverse

Name: 74318214

Synonym: Tbd_2196

Alternate gene names: NA

Gene position: 2277379-2276489 (Counterclockwise)

Preceding gene: 74318217

Following gene: 74318206

Centisome position: 78.27

GC content: 66.78

Gene sequence:

>891_bases
ATGATTACAAAAGAAAAAATGCGCCTGGATCTCAAATGGGCGACGCGCCAGCGGCTGCAGTACATTGAAATCATGGCTTG
GTACGCGGGGGTCGTGACGCGCAGCGACGTCGCCCGCGCCTTCGGACTCTCAGACCCGGCGGCGACCAAGGACCTCAAGC
TCTACAGCGATCTCGCCCCCGGCAACCTGGCCTACAATCACGGCGTATTTGGCTTCGTCCCGGCCCATGGCTTTGCCGCG
GCGTTCGCCGACCTCAGCCCCGCGCGCGCCCTGCCCGTGATCGCGGCGAATCTCGCGGTCGCGAACGGGCCGTACGGCGA
CACGCTGATCTACGGCCTGCCGACCGCCTCGCTGCCGCTCCCGGTGCGCCTGCCCAGCGCGCATACGCTCGCCGCGATCA
CCCGGGCGATCCACGGCAGGCGCAAGCTGAGGGTGACTTACCGTTCGCTTTCGGGACGCGACAATCAAGAGCCGCGCCTC
CTCGAGCCGCACACCCTGGTCGACACCGGCCTGCGCTGGCACGTCCGCGCTTATAGCGAGGACGGCTGCGACTTTCGCGA
TTTCGTGCTGTCCAGGATCGTCGACGCCGAGTGCCTGGACGCGCCTGCCGAATCGGGCGGGCAGTACGACGACGACTGGG
TCGAGCAGGTGACGCTGCAACTCGTCCCCCATTCGGGCCTCGACCCGGCGCGCCGCGAGAATCTGCTGCTCGATTACGGC
GCGTCCGGCGAAGTCATCGAAGTGACGGTGCGGCGCGCGCTTCTGGGTTATGTCCTGCAGCGCCTCGCCGTCGACACGAC
GGCCGACCACAGCCTGAACCCGCACGCCAACCAGCTGATGCTGCTCAACCGTGAGGAGATCGAACCGTTCGCGGCGTGGG
CGTTTCGATAG

Upstream 100 bases:

>100_bases
TAAAAAATATCACCTGTATAGAAAATACTGTCTAATCGTTCCGTATAGGCGTGGTGCGGCCCTATAATCCCAGGCCACGA
CCGCAAGCGGAGCGAGCGAC

Downstream 100 bases:

>100_bases
AGTCAGGGGTCGGGACTCAGGGGGTAAAAGGCAGGGGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGG
CAGGAGGCAGGAGGCAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAPGNLAYNHGVFGFVPAHGFAA
AFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPLPVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRL
LEPHTLVDTGLRWHVRAYSEDGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG
ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR

Sequences:

>Translated_296_residues
MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAPGNLAYNHGVFGFVPAHGFAA
AFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPLPVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRL
LEPHTLVDTGLRWHVRAYSEDGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG
ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR
>Mature_296_residues
MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAPGNLAYNHGVFGFVPAHGFAA
AFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPLPVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRL
LEPHTLVDTGLRWHVRAYSEDGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG
ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32783; Mature: 32783

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAP
CCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC
GNLAYNHGVFGFVPAHGFAAAFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPL
CCEEECCCCEEEECCCHHHHHHHCCCCHHHHHHHEEHEEECCCCCCCEEEEECCCCCCCC
PVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRLLEPHTLVDTGLRWHVRAYSE
EEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEECCCHHHHCCCEEEEEEECC
DGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG
CCCCHHHHHHHHHHCHHHHCCCHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCEEEEEC
ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHCCC
>Mature Secondary Structure
MITKEKMRLDLKWATRQRLQYIEIMAWYAGVVTRSDVARAFGLSDPAATKDLKLYSDLAP
CCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC
GNLAYNHGVFGFVPAHGFAAAFADLSPARALPVIAANLAVANGPYGDTLIYGLPTASLPL
CCEEECCCCEEEECCCHHHHHHHCCCCHHHHHHHEEHEEECCCCCCCEEEEECCCCCCCC
PVRLPSAHTLAAITRAIHGRRKLRVTYRSLSGRDNQEPRLLEPHTLVDTGLRWHVRAYSE
EEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEECCCHHHHCCCEEEEEEECC
DGCDFRDFVLSRIVDAECLDAPAESGGQYDDDWVEQVTLQLVPHSGLDPARRENLLLDYG
CCCCHHHHHHHHHHCHHHHCCCHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCEEEEEC
ASGEVIEVTVRRALLGYVLQRLAVDTTADHSLNPHANQLMLLNREEIEPFAAWAFR
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA