Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318206

Identifier: 74318206

GI number: 74318206

Start: 2270096

End: 2271397

Strand: Reverse

Name: 74318206

Synonym: Tbd_2188

Alternate gene names: NA

Gene position: 2271397-2270096 (Counterclockwise)

Preceding gene: 74318214

Following gene: 74318205

Centisome position: 78.06

GC content: 68.05

Gene sequence:

>1302_bases
ATGACTGCGTCGCCTCCGGCGAAGGCGCAGGCCGGCGGTCGAATCGCGGTCAAATTGAAGATAAGCAGGTCGTCAAGTGG
TTATAATGCCGCCATGTCGCAATCGCTGAACCCCCTGACGCTGCCCGATCGCTTCGCCATTCGTGGCCGTTCCTTGCTGC
CCATCGTCCAGGGCGGCATGGGCGTGGGCGTTTCGGCACACGGGCTGGCCGGTTCGGTGGCGCATGCCGGTGCCGTCGGC
ACGATCGCGAGCGTCGACCTGCGTCATCACCACGCCGATCTCACGGCCGCGGCGCAGCGTTGCCGCGATCGCGACACGCT
CCATCGGCTCAATCTGGTCGCGCTCGACCGCGAGATCAAGGCGGCGCTCGCGACCGCAGCGGGGCGCGGGCTGGTTGCAG
TGAACGTGATGAAGGCCGTCGACGCGTATCCCGACCACGTCCGGCAGGCCTGCGCCTCGGGCGCCCACGCGATCGTCATG
GGTGCAGGCCTGCCGCTCGACCTGCCCGAACTCGCCGCGGGCTACCCCGACGTCGCGCTGATCCCGATCCTCTCGGACGC
CCGCGGTGTCGCGGTGGTGCTGAAAAAATGGATGCGCCAGAAGCCGTCCGGCCGCCTGCCGGACGCGATCGTGATCGAGC
ATCCCCGCTACGCCGGCGGTCATCTCGGGGCGCCGGACGCCAACGATCTGAACGACGCGCGTTTCGACTTCGCGCGCGTG
TTGCCGGAAATCTTCGAGGTCTTCGACGCGCTCTGTATCGCGCGCGGCCAGATACCGGTCATCGTCGCAGGCGGCATCAA
CAGCCATGAGAAACTTCTCGCCGCGCTCGCGGCCGGGGCGAGCGCGGTGCAGGTCGGCACCGCGTTCGCGGTCACGACCG
AGGGCGACGCTCACCCGAATTTCAAGCGCGTGCTTGCCGAAGCCCGGCCCGAGGACATCGTCACCTTCATGAGCGTCGCG
GGCCTGCCGGCGCGCGCGGTGAAGACGCCGTGGCTCGTCAATTACCTGAAGCGCGAACGCAAGCTCCAGGGCGTCGCCAA
GGCCGATCCCGACCGCTGTGCGATCGGCCTGCACTGTCTGACGCGCTGCGGCTTACGCGACGGGCTCGCGCGCGCCGGGC
AGTTCTGCATCGATTCGCAACTCGTCGCCGCGCTCAAGGGCGATCTCGCGAAGGGCCTCTTCTTTCGCGGCTCGGAGTCG
CTGCCGTTCGGCAGCGAGATCCGCAGCGTGCGCGAACTGATCGATTACCTGCTGACCGGCGTGAAACAGGTCGTCGCGCA
GCTGCAGGAAGCACCGGCATGA

Upstream 100 bases:

>100_bases
ATGGCCTGGATGATGCCTGTGAACATGCGTGGGGAGGCCTGCAGTGAGACCCGGCATTGTAGGCGTTTAGGGGGGGCGGG
TGAACCCCGGGAAGGCGGCG

Downstream 100 bases:

>100_bases
GCATGCTCAGCGAACGCGTGCATACCTTCGGCCGAGCGATGCTCGACCGCTATGGGGAGCGCGTGCACAAGATCGCGCTC
GACGCCGGCTTCACCTGCCC

Product: putative 2-nitropropane dioxygenase

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase Npd; 2-Nitropropane Dioxygenase-Like Protein; Dioxygenase; Dioxygenases Related 2-Nitropropane Dioxygenase; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase Family; Enoyl-[Acyl-Carrier Protein] Reductase; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MTASPPAKAQAGGRIAVKLKISRSSSGYNAAMSQSLNPLTLPDRFAIRGRSLLPIVQGGMGVGVSAHGLAGSVAHAGAVG
TIASVDLRHHHADLTAAAQRCRDRDTLHRLNLVALDREIKAALATAAGRGLVAVNVMKAVDAYPDHVRQACASGAHAIVM
GAGLPLDLPELAAGYPDVALIPILSDARGVAVVLKKWMRQKPSGRLPDAIVIEHPRYAGGHLGAPDANDLNDARFDFARV
LPEIFEVFDALCIARGQIPVIVAGGINSHEKLLAALAAGASAVQVGTAFAVTTEGDAHPNFKRVLAEARPEDIVTFMSVA
GLPARAVKTPWLVNYLKRERKLQGVAKADPDRCAIGLHCLTRCGLRDGLARAGQFCIDSQLVAALKGDLAKGLFFRGSES
LPFGSEIRSVRELIDYLLTGVKQVVAQLQEAPA

Sequences:

>Translated_433_residues
MTASPPAKAQAGGRIAVKLKISRSSSGYNAAMSQSLNPLTLPDRFAIRGRSLLPIVQGGMGVGVSAHGLAGSVAHAGAVG
TIASVDLRHHHADLTAAAQRCRDRDTLHRLNLVALDREIKAALATAAGRGLVAVNVMKAVDAYPDHVRQACASGAHAIVM
GAGLPLDLPELAAGYPDVALIPILSDARGVAVVLKKWMRQKPSGRLPDAIVIEHPRYAGGHLGAPDANDLNDARFDFARV
LPEIFEVFDALCIARGQIPVIVAGGINSHEKLLAALAAGASAVQVGTAFAVTTEGDAHPNFKRVLAEARPEDIVTFMSVA
GLPARAVKTPWLVNYLKRERKLQGVAKADPDRCAIGLHCLTRCGLRDGLARAGQFCIDSQLVAALKGDLAKGLFFRGSES
LPFGSEIRSVRELIDYLLTGVKQVVAQLQEAPA
>Mature_432_residues
TASPPAKAQAGGRIAVKLKISRSSSGYNAAMSQSLNPLTLPDRFAIRGRSLLPIVQGGMGVGVSAHGLAGSVAHAGAVGT
IASVDLRHHHADLTAAAQRCRDRDTLHRLNLVALDREIKAALATAAGRGLVAVNVMKAVDAYPDHVRQACASGAHAIVMG
AGLPLDLPELAAGYPDVALIPILSDARGVAVVLKKWMRQKPSGRLPDAIVIEHPRYAGGHLGAPDANDLNDARFDFARVL
PEIFEVFDALCIARGQIPVIVAGGINSHEKLLAALAAGASAVQVGTAFAVTTEGDAHPNFKRVLAEARPEDIVTFMSVAG
LPARAVKTPWLVNYLKRERKLQGVAKADPDRCAIGLHCLTRCGLRDGLARAGQFCIDSQLVAALKGDLAKGLFFRGSESL
PFGSEIRSVRELIDYLLTGVKQVVAQLQEAPA

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45510; Mature: 45379

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASPPAKAQAGGRIAVKLKISRSSSGYNAAMSQSLNPLTLPDRFAIRGRSLLPIVQGGM
CCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCHHHCCCC
GVGVSAHGLAGSVAHAGAVGTIASVDLRHHHADLTAAAQRCRDRDTLHRLNLVALDREIK
CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AALATAAGRGLVAVNVMKAVDAYPDHVRQACASGAHAIVMGAGLPLDLPELAAGYPDVAL
HHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCEEE
IPILSDARGVAVVLKKWMRQKPSGRLPDAIVIEHPRYAGGHLGAPDANDLNDARFDFARV
EEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
LPEIFEVFDALCIARGQIPVIVAGGINSHEKLLAALAAGASAVQVGTAFAVTTEGDAHPN
HHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHEEECEEEEEEECCCCCCH
FKRVLAEARPEDIVTFMSVAGLPARAVKTPWLVNYLKRERKLQGVAKADPDRCAIGLHCL
HHHHHHHCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TRCGLRDGLARAGQFCIDSQLVAALKGDLAKGLFFRGSESLPFGSEIRSVRELIDYLLTG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHH
VKQVVAQLQEAPA
HHHHHHHHHHCCC
>Mature Secondary Structure 
TASPPAKAQAGGRIAVKLKISRSSSGYNAAMSQSLNPLTLPDRFAIRGRSLLPIVQGGM
CCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCHHHCCCC
GVGVSAHGLAGSVAHAGAVGTIASVDLRHHHADLTAAAQRCRDRDTLHRLNLVALDREIK
CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AALATAAGRGLVAVNVMKAVDAYPDHVRQACASGAHAIVMGAGLPLDLPELAAGYPDVAL
HHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCEEE
IPILSDARGVAVVLKKWMRQKPSGRLPDAIVIEHPRYAGGHLGAPDANDLNDARFDFARV
EEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
LPEIFEVFDALCIARGQIPVIVAGGINSHEKLLAALAAGASAVQVGTAFAVTTEGDAHPN
HHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHEEECEEEEEEECCCCCCH
FKRVLAEARPEDIVTFMSVAGLPARAVKTPWLVNYLKRERKLQGVAKADPDRCAIGLHCL
HHHHHHHCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TRCGLRDGLARAGQFCIDSQLVAALKGDLAKGLFFRGSESLPFGSEIRSVRELIDYLLTG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHH
VKQVVAQLQEAPA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA