| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318190
Identifier: 74318190
GI number: 74318190
Start: 2257876
End: 2258316
Strand: Direct
Name: 74318190
Synonym: Tbd_2172
Alternate gene names: NA
Gene position: 2257876-2258316 (Clockwise)
Preceding gene: 74318187
Following gene: 74318191
Centisome position: 77.6
GC content: 63.72
Gene sequence:
>441_bases ATGAGCACTATCGTGGATTTTCTGGGCGCCGACCACCGCGCCTGCGACGACTTGTTCGCCTCGGCCGAAGCGGCCGCGGC GCAAAAAAACTGGGATAGCGCGCGCACGCTCTTCACGCGCTTCCACGAGGCCATGGAACACCACCTGACGATGGAGGAAG AAGTCCTGTTCCCGGCCTTCGAGAAGCGCCCCGGCATGGCCGCCGGGCCGACCCAGGTCATGCGCTCGGAGCATGTGCAG ATGCGCGGACTCATGGACGACATGGCCAACGCGGTCGCCGCGAGCAACCGCGACGGCTATCTCGGGCTGTCCGAGACGCT CAACATGCTGATGCAGCAGCACAACCTGAAGGAGGAGAACATGCTCTATCCGATGTCCGACCAGGTGCTGAACAGCGAAC GCGACGGCCTGATCCGGACCATGGAAGGCATGGCGCGGTAA
Upstream 100 bases:
>100_bases CCACGGCGTAACGATACAACATGTTGATTAAAGGTCAAGATGAATTTCAGGTTGTCTTGTCCTGTTACACTCCCCACTCA GCCATCACGGAGGAAAACCT
Downstream 100 bases:
>100_bases GACTGCGCATGGAGGGGTCGGACGAAATCCTCGTCGACGCGCGCGGCCTGGCGGCACCCGAGCCGCTCGAACGCGTCATG GACGCGCTCGACACGCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSTIVDFLGADHRACDDLFASAEAAAAQKNWDSARTLFTRFHEAMEHHLTMEEEVLFPAFEKRPGMAAGPTQVMRSEHVQ MRGLMDDMANAVAASNRDGYLGLSETLNMLMQQHNLKEENMLYPMSDQVLNSERDGLIRTMEGMAR
Sequences:
>Translated_146_residues MSTIVDFLGADHRACDDLFASAEAAAAQKNWDSARTLFTRFHEAMEHHLTMEEEVLFPAFEKRPGMAAGPTQVMRSEHVQ MRGLMDDMANAVAASNRDGYLGLSETLNMLMQQHNLKEENMLYPMSDQVLNSERDGLIRTMEGMAR >Mature_145_residues STIVDFLGADHRACDDLFASAEAAAAQKNWDSARTLFTRFHEAMEHHLTMEEEVLFPAFEKRPGMAAGPTQVMRSEHVQM RGLMDDMANAVAASNRDGYLGLSETLNMLMQQHNLKEENMLYPMSDQVLNSERDGLIRTMEGMAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16454; Mature: 16323
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 9.6 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 9.0 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIVDFLGADHRACDDLFASAEAAAAQKNWDSARTLFTRFHEAMEHHLTMEEEVLFPAF CCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH EKRPGMAAGPTQVMRSEHVQMRGLMDDMANAVAASNRDGYLGLSETLNMLMQQHNLKEEN HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHC MLYPMSDQVLNSERDGLIRTMEGMAR CCCCCHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure STIVDFLGADHRACDDLFASAEAAAAQKNWDSARTLFTRFHEAMEHHLTMEEEVLFPAF CHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH EKRPGMAAGPTQVMRSEHVQMRGLMDDMANAVAASNRDGYLGLSETLNMLMQQHNLKEEN HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHC MLYPMSDQVLNSERDGLIRTMEGMAR CCCCCHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA