| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318187
Identifier: 74318187
GI number: 74318187
Start: 2254052
End: 2254798
Strand: Direct
Name: 74318187
Synonym: Tbd_2169
Alternate gene names: NA
Gene position: 2254052-2254798 (Clockwise)
Preceding gene: 74318186
Following gene: 74318190
Centisome position: 77.46
GC content: 70.28
Gene sequence:
>747_bases ATGACGGGCTTCAAGGACCATTTCTCGTCGGGGTCCGAAGGCTACGCGGCATACCGGCCCGACTATCCCGCCACGCTCTT CGCCTGGCTCTCTAGCCTCTGTGCGGAACGCCGCCTCGCCTGGGACTGCGCGACCGGAAGCGGCCAGGCCGCACGCGGGC TCGCGGCGCATTTCCCACGTGTCGTCGCGAGCGACGCATCGGCCGAGCAGGTCCGTCACGCCACGCCGCATCCAGGGGTC GATTACCGAGTCGCGACCGCGGAGGCGAGCGGGCTCGCCGAGCGCAGCGTCGACCTCGTCACGGTCGCACAGGCCGCGCA CTGGTTCGATCTGCCGCGCTTTTACGCCGAGGTCGCGCGCGTGCTGAAGCCCGCCGGCGTCGCGGCGCTCTGGGGCTACG GCCGCATCGTGCTGCCGGGTGCGATGGACGCGCCGCTGCGGTATTTCTACGCCGAGACGGTCGGTCCCTACTGGCCCGCG GAACGGGCGCTGATCGACGACGCCTACCGCGGCCTCGATTTTCCGTTTGTCGAAATCCCGCCGCCAGCGTTCGCGATCGA AGTCGCGTGGACGCTCCCGCGGCTCATCGACTATCTCTCGACCTGGTCCGCCGTGAAGCGCTTCCAGACCGCGCGGGGAC GCGACCCCTTGCCGGCGCTGAACGCCGAACTCGCGCCGCTGTGGGGCGATGCGAACGCGGCCATGACCTTGCGCTGGCCG CTGTTCCTGCGCGTCGGACGGGTCTAG
Upstream 100 bases:
>100_bases TCGCCCACGCGCCGCTCGCCACGCTCGCCGAGGCCGCGCGTTTCCGGTTGCAAGACCTGCGGCAGATCGGCGGCGACCTG CGCCTGACCCTGCTGCCGGC
Downstream 100 bases:
>100_bases CTGCGCACCGAAAAATCTGTGAAGAGATCGGCGAATTGCTCGCCGACGTCGTGCAGCGGGCGCTCGCGCGTCGCGCTGCG GCCGAGCGCCGCGTTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase Domain Family
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTGFKDHFSSGSEGYAAYRPDYPATLFAWLSSLCAERRLAWDCATGSGQAARGLAAHFPRVVASDASAEQVRHATPHPGV DYRVATAEASGLAERSVDLVTVAQAAHWFDLPRFYAEVARVLKPAGVAALWGYGRIVLPGAMDAPLRYFYAETVGPYWPA ERALIDDAYRGLDFPFVEIPPPAFAIEVAWTLPRLIDYLSTWSAVKRFQTARGRDPLPALNAELAPLWGDANAAMTLRWP LFLRVGRV
Sequences:
>Translated_248_residues MTGFKDHFSSGSEGYAAYRPDYPATLFAWLSSLCAERRLAWDCATGSGQAARGLAAHFPRVVASDASAEQVRHATPHPGV DYRVATAEASGLAERSVDLVTVAQAAHWFDLPRFYAEVARVLKPAGVAALWGYGRIVLPGAMDAPLRYFYAETVGPYWPA ERALIDDAYRGLDFPFVEIPPPAFAIEVAWTLPRLIDYLSTWSAVKRFQTARGRDPLPALNAELAPLWGDANAAMTLRWP LFLRVGRV >Mature_247_residues TGFKDHFSSGSEGYAAYRPDYPATLFAWLSSLCAERRLAWDCATGSGQAARGLAAHFPRVVASDASAEQVRHATPHPGVD YRVATAEASGLAERSVDLVTVAQAAHWFDLPRFYAEVARVLKPAGVAALWGYGRIVLPGAMDAPLRYFYAETVGPYWPAE RALIDDAYRGLDFPFVEIPPPAFAIEVAWTLPRLIDYLSTWSAVKRFQTARGRDPLPALNAELAPLWGDANAAMTLRWPL FLRVGRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321023, Length=271, Percent_Identity=21.4022140221402, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27240; Mature: 27109
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFKDHFSSGSEGYAAYRPDYPATLFAWLSSLCAERRLAWDCATGSGQAARGLAAHFPR CCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCH VVASDASAEQVRHATPHPGVDYRVATAEASGLAERSVDLVTVAQAAHWFDLPRFYAEVAR HHHCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VLKPAGVAALWGYGRIVLPGAMDAPLRYFYAETVGPYWPAERALIDDAYRGLDFPFVEIP HHCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECC PPAFAIEVAWTLPRLIDYLSTWSAVKRFQTARGRDPLPALNAELAPLWGDANAAMTLRWP CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEHH LFLRVGRV HHHEECCC >Mature Secondary Structure TGFKDHFSSGSEGYAAYRPDYPATLFAWLSSLCAERRLAWDCATGSGQAARGLAAHFPR CCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCH VVASDASAEQVRHATPHPGVDYRVATAEASGLAERSVDLVTVAQAAHWFDLPRFYAEVAR HHHCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VLKPAGVAALWGYGRIVLPGAMDAPLRYFYAETVGPYWPAERALIDDAYRGLDFPFVEIP HHCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECC PPAFAIEVAWTLPRLIDYLSTWSAVKRFQTARGRDPLPALNAELAPLWGDANAAMTLRWP CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEHH LFLRVGRV HHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA