| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is ecaA [H]
Identifier: 74318185
GI number: 74318185
Start: 2252086
End: 2252862
Strand: Direct
Name: ecaA [H]
Synonym: Tbd_2167
Alternate gene names: 74318185
Gene position: 2252086-2252862 (Clockwise)
Preceding gene: 74318184
Following gene: 74318186
Centisome position: 77.4
GC content: 65.89
Gene sequence:
>777_bases ATGCTGTTTCTTACCCTCACATGGAGAAAACGCATGCTGCTTCGCCTGTCCGCCGCCCTTCTGTCCTCTCTAAGCTTCGC CGCTGCCGCGGCACCGGGATCGCACTGGACCTACGAGGGCGAGCACGGCCCCACGCATTGGGCCCAACTCGACAAGGGCT TTGCCGAATGCGCGCTCGGCCACGCGCAATCGCCGATCGACATCCGCGACGCGACGCCGAGGGCCGACGCGCCGGACCTC GATTTCCGTTATCAGGCGACGCCGCTTCGTCTGATCAACAACGGCCATACCGTGCAGGTCGACGAATCGGATGCGGGCAC GCTGACGATCGGCGGCCATCGCTACGCGCTCGCCCAGTTCCACTTCCATACGCCGAGCGAGGAACGTGTGCGCGGCAAGG CCTACGACATGGTTGCGCATCTGGTCCACAAGGACGCTTCCGGGAAACTCGCCGCGGTCGCCGTGCTATTCAAGGCCGGC CGCGAAAACGCTGCGCTGAAGACCGTGTTCGACAACATGCCGCTCGGCGCAGGGCCGGAGCATAAGGTCGAAGGCGTGCA GTTCAACCCGGCCGACCTGCTGCCCAAGCAGCACGCCTACTACCACTTCCAGGGCTCGCTGACGACGCCGCCGTGTTCGG AGGGTGTCGCCTGGTATGTGCTGAAGACCCCGGTCGAGGCCTCGCGTGCACAGATCGGCCAGTTGCGCACGCTCTACCCG CACAACGCCCGCCCGGTGCAGGCGCTGCACGGCCGGCAGGTGATCGACCACCCCTGA
Upstream 100 bases:
>100_bases CAGGGACCGCAAGCCGGCGACGATCCCGCCTAGGCTGCCGGAGCGCGGCCTTGACGTCCCGCTGACGCCGCCTTGACGCG CGCGCGACAGGACTTCGCGC
Downstream 100 bases:
>100_bases TTGCCGCGGGGCGTTCGCCGCACGGCGGGGGCGCGCCAGGGGATCTGTCACGCTGCGCAGAGCGGGCCCGCCGTGCTACT GTTCACGCGGTTTCGTATCT
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MLFLTLTWRKRMLLRLSAALLSSLSFAAAAAPGSHWTYEGEHGPTHWAQLDKGFAECALGHAQSPIDIRDATPRADAPDL DFRYQATPLRLINNGHTVQVDESDAGTLTIGGHRYALAQFHFHTPSEERVRGKAYDMVAHLVHKDASGKLAAVAVLFKAG RENAALKTVFDNMPLGAGPEHKVEGVQFNPADLLPKQHAYYHFQGSLTTPPCSEGVAWYVLKTPVEASRAQIGQLRTLYP HNARPVQALHGRQVIDHP
Sequences:
>Translated_258_residues MLFLTLTWRKRMLLRLSAALLSSLSFAAAAAPGSHWTYEGEHGPTHWAQLDKGFAECALGHAQSPIDIRDATPRADAPDL DFRYQATPLRLINNGHTVQVDESDAGTLTIGGHRYALAQFHFHTPSEERVRGKAYDMVAHLVHKDASGKLAAVAVLFKAG RENAALKTVFDNMPLGAGPEHKVEGVQFNPADLLPKQHAYYHFQGSLTTPPCSEGVAWYVLKTPVEASRAQIGQLRTLYP HNARPVQALHGRQVIDHP >Mature_258_residues MLFLTLTWRKRMLLRLSAALLSSLSFAAAAAPGSHWTYEGEHGPTHWAQLDKGFAECALGHAQSPIDIRDATPRADAPDL DFRYQATPLRLINNGHTVQVDESDAGTLTIGGHRYALAQFHFHTPSEERVRGKAYDMVAHLVHKDASGKLAAVAVLFKAG RENAALKTVFDNMPLGAGPEHKVEGVQFNPADLLPKQHAYYHFQGSLTTPPCSEGVAWYVLKTPVEASRAQIGQLRTLYP HNARPVQALHGRQVIDHP
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG3338
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-carbonic anhydrase family [H]
Homologues:
Organism=Homo sapiens, GI4885101, Length=256, Percent_Identity=35.546875, Blast_Score=120, Evalue=9e-28, Organism=Homo sapiens, GI4557395, Length=256, Percent_Identity=35.15625, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI6912284, Length=265, Percent_Identity=34.7169811320755, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI258679498, Length=256, Percent_Identity=31.25, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI192447434, Length=256, Percent_Identity=31.25, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI192447432, Length=256, Percent_Identity=31.25, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI192447430, Length=256, Percent_Identity=31.25, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI4502517, Length=256, Percent_Identity=31.25, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI6005723, Length=288, Percent_Identity=31.9444444444444, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI62240989, Length=200, Percent_Identity=36.5, Blast_Score=104, Evalue=9e-23, Organism=Homo sapiens, GI4502515, Length=237, Percent_Identity=33.7552742616034, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI38348436, Length=256, Percent_Identity=30.078125, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI45935383, Length=239, Percent_Identity=33.4728033472803, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI4502521, Length=232, Percent_Identity=32.7586206896552, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI4885099, Length=256, Percent_Identity=30.078125, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI22027500, Length=242, Percent_Identity=30.9917355371901, Blast_Score=94, Evalue=9e-20, Organism=Homo sapiens, GI70167127, Length=235, Percent_Identity=31.4893617021277, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4502519, Length=268, Percent_Identity=27.6119402985075, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI169636420, Length=257, Percent_Identity=32.295719844358, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI194097398, Length=271, Percent_Identity=26.9372693726937, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17568715, Length=250, Percent_Identity=32, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71995280, Length=275, Percent_Identity=30.9090909090909, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17569163, Length=228, Percent_Identity=28.5087719298246, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17569165, Length=223, Percent_Identity=28.6995515695067, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI17737413, Length=254, Percent_Identity=33.0708661417323, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI21358169, Length=279, Percent_Identity=29.7491039426523, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24645604, Length=277, Percent_Identity=25.2707581227437, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24650523, Length=288, Percent_Identity=26.3888888888889, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001148 - InterPro: IPR018338 - InterPro: IPR018340 - InterPro: IPR006311 [H]
Pfam domain/function: PF00194 Carb_anhydrase [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 28347; Mature: 28347
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS51144 ALPHA_CA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLTLTWRKRMLLRLSAALLSSLSFAAAAAPGSHWTYEGEHGPTHWAQLDKGFAECALG CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHC HAQSPIDIRDATPRADAPDLDFRYQATPLRLINNGHTVQVDESDAGTLTIGGHRYALAQF CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCEEEEECCCCCEEEECCCEEEEEEE HFHTPSEERVRGKAYDMVAHLVHKDASGKLAAVAVLFKAGRENAALKTVFDNMPLGAGPE EECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC HKVEGVQFNPADLLPKQHAYYHFQGSLTTPPCSEGVAWYVLKTPVEASRAQIGQLRTLYP CCCCCEEECHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCEEEECC HNARPVQALHGRQVIDHP CCCCCHHHHCCCCCCCCC >Mature Secondary Structure MLFLTLTWRKRMLLRLSAALLSSLSFAAAAAPGSHWTYEGEHGPTHWAQLDKGFAECALG CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHC HAQSPIDIRDATPRADAPDLDFRYQATPLRLINNGHTVQVDESDAGTLTIGGHRYALAQF CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCEEEEECCCCCEEEECCCEEEEEEE HFHTPSEERVRGKAYDMVAHLVHKDASGKLAAVAVLFKAGRENAALKTVFDNMPLGAGPE EECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC HKVEGVQFNPADLLPKQHAYYHFQGSLTTPPCSEGVAWYVLKTPVEASRAQIGQLRTLYP CCCCCEEECHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCEEEECC HNARPVQALHGRQVIDHP CCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9006032; 11759840 [H]