| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318179
Identifier: 74318179
GI number: 74318179
Start: 2246762
End: 2247472
Strand: Direct
Name: 74318179
Synonym: Tbd_2161
Alternate gene names: NA
Gene position: 2246762-2247472 (Clockwise)
Preceding gene: 74318178
Following gene: 74318180
Centisome position: 77.21
GC content: 53.02
Gene sequence:
>711_bases ATGAAAATCAGGAAATTCCTCAGTCTTGAATGGGATGCGATCGCAGGAATCGTGGCTGCCGTGGCGGCGATCGTTCTACA TCTTTTGCATTTCGTCGACGAGCGAGTCATCTTGCCGATCGTGCTTGCTCTAATAGCCCTACTATTCATCAACTTCTTGC GGCATACCAGAAACAACGAACTGACCGCCGAACAAGTCGATCGCACGGCACGGGCGGTTAACAGAATCCAGTCGGTGCTA AAGCATCCCGATGTAATTCTCGTCGGCCCACGCCACCTGCGTTCCGCGAACGAGCAATTCATCAAGCACATGAGCGGCGA CACGATCTGGTTCAATGTCTGCCTGTCGATGTATAGGACACAGCCACTGTTCGATTCCTTGCTGCGCCCGGCGATAGACA ACCCGATGGTGTCCTCGATTCAGTTCATTCTCGACGAGGGCCAGAAGGATTTATGGCAACAATTCATACAGCCCAAGATT GCCGCATGCTCGGGTTCTGCAAAGGTCAGGGAACCCCGCTGGCGCAACTTGAGCAAGACCGTTTCCTATATTCTCGCCGA TAGCCAATTAAGCGGTGGAACGGAAGCGTTACTGAGCTTCTGGGGTGAGCCTTTCATGGCACAGACCACTGAACGCGACG TACCGCGTTTCATCTTTCATGTGCAAAGGAACGCCGAGATTCTGCCTCATCTCGTCGAACTGGAACGCTAG
Upstream 100 bases:
>100_bases ATTCAATAGAACAACGGCTCACCATCAAAAGGGCGCGTCTTATGCACCCTTGGTTTTTTGACGTACAGCGGTTCAGTTTC GACTCCGCGTTGGGAGACGC
Downstream 100 bases:
>100_bases CGATATCGGCGTAAATGACGAGTAGGAGGCCACCGCTGGATTTCGTGATGGCCTGATCCAACAACGTTCAGCCCGGGGCT CCCCGCGTCTCGCTCCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNELTAEQVDRTARAVNRIQSVL KHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRTQPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKI AACSGSAKVREPRWRNLSKTVSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER
Sequences:
>Translated_236_residues MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNELTAEQVDRTARAVNRIQSVL KHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRTQPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKI AACSGSAKVREPRWRNLSKTVSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER >Mature_236_residues MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNELTAEQVDRTARAVNRIQSVL KHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRTQPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKI AACSGSAKVREPRWRNLSKTVSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26986; Mature: 26986
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNE CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LTAEQVDRTARAVNRIQSVLKHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRT CCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC QPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKIAACSGSAKVREPRWRNLSKT CHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCHHHHHCCCCCCCCCCHHCCHHHH VSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER HHHHHHHCCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNE CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LTAEQVDRTARAVNRIQSVLKHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRT CCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC QPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKIAACSGSAKVREPRWRNLSKT CHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCHHHHHCCCCCCCCCCHHCCHHHH VSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER HHHHHHHCCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA