Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318179

Identifier: 74318179

GI number: 74318179

Start: 2246762

End: 2247472

Strand: Direct

Name: 74318179

Synonym: Tbd_2161

Alternate gene names: NA

Gene position: 2246762-2247472 (Clockwise)

Preceding gene: 74318178

Following gene: 74318180

Centisome position: 77.21

GC content: 53.02

Gene sequence:

>711_bases
ATGAAAATCAGGAAATTCCTCAGTCTTGAATGGGATGCGATCGCAGGAATCGTGGCTGCCGTGGCGGCGATCGTTCTACA
TCTTTTGCATTTCGTCGACGAGCGAGTCATCTTGCCGATCGTGCTTGCTCTAATAGCCCTACTATTCATCAACTTCTTGC
GGCATACCAGAAACAACGAACTGACCGCCGAACAAGTCGATCGCACGGCACGGGCGGTTAACAGAATCCAGTCGGTGCTA
AAGCATCCCGATGTAATTCTCGTCGGCCCACGCCACCTGCGTTCCGCGAACGAGCAATTCATCAAGCACATGAGCGGCGA
CACGATCTGGTTCAATGTCTGCCTGTCGATGTATAGGACACAGCCACTGTTCGATTCCTTGCTGCGCCCGGCGATAGACA
ACCCGATGGTGTCCTCGATTCAGTTCATTCTCGACGAGGGCCAGAAGGATTTATGGCAACAATTCATACAGCCCAAGATT
GCCGCATGCTCGGGTTCTGCAAAGGTCAGGGAACCCCGCTGGCGCAACTTGAGCAAGACCGTTTCCTATATTCTCGCCGA
TAGCCAATTAAGCGGTGGAACGGAAGCGTTACTGAGCTTCTGGGGTGAGCCTTTCATGGCACAGACCACTGAACGCGACG
TACCGCGTTTCATCTTTCATGTGCAAAGGAACGCCGAGATTCTGCCTCATCTCGTCGAACTGGAACGCTAG

Upstream 100 bases:

>100_bases
ATTCAATAGAACAACGGCTCACCATCAAAAGGGCGCGTCTTATGCACCCTTGGTTTTTTGACGTACAGCGGTTCAGTTTC
GACTCCGCGTTGGGAGACGC

Downstream 100 bases:

>100_bases
CGATATCGGCGTAAATGACGAGTAGGAGGCCACCGCTGGATTTCGTGATGGCCTGATCCAACAACGTTCAGCCCGGGGCT
CCCCGCGTCTCGCTCCACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNELTAEQVDRTARAVNRIQSVL
KHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRTQPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKI
AACSGSAKVREPRWRNLSKTVSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER

Sequences:

>Translated_236_residues
MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNELTAEQVDRTARAVNRIQSVL
KHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRTQPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKI
AACSGSAKVREPRWRNLSKTVSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER
>Mature_236_residues
MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNELTAEQVDRTARAVNRIQSVL
KHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRTQPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKI
AACSGSAKVREPRWRNLSKTVSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26986; Mature: 26986

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNE
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTAEQVDRTARAVNRIQSVLKHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRT
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
QPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKIAACSGSAKVREPRWRNLSKT
CHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCHHHHHCCCCCCCCCCHHCCHHHH
VSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER
HHHHHHHCCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MKIRKFLSLEWDAIAGIVAAVAAIVLHLLHFVDERVILPIVLALIALLFINFLRHTRNNE
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTAEQVDRTARAVNRIQSVLKHPDVILVGPRHLRSANEQFIKHMSGDTIWFNVCLSMYRT
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
QPLFDSLLRPAIDNPMVSSIQFILDEGQKDLWQQFIQPKIAACSGSAKVREPRWRNLSKT
CHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCHHHHHCCCCCCCCCCHHCCHHHH
VSYILADSQLSGGTEALLSFWGEPFMAQTTERDVPRFIFHVQRNAEILPHLVELER
HHHHHHHCCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA