Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318178

Identifier: 74318178

GI number: 74318178

Start: 2246139

End: 2246543

Strand: Direct

Name: 74318178

Synonym: Tbd_2160

Alternate gene names: NA

Gene position: 2246139-2246543 (Clockwise)

Preceding gene: 74318172

Following gene: 74318179

Centisome position: 77.19

GC content: 59.51

Gene sequence:

>405_bases
TTGTCGCCCAGTCTGCCCCCGTCCGGCAGCCGGGCCTCGACCTATGCCGCGAAATCTTACGTCGCCGAAGAGCGGACGGG
CGGGGCGGAACAGCGCTCGACGCGCAGAAACGCCGGACGTAAAAACGCCACCTCGAAGGTGGCGCTTCACTCACTCGACA
TCGGCGATCAATGCCGGTTTTTGGCCGGTGCAGGCGCCTTGGGCGGCGTGATTAACGAGCCGATCGGAACGACGAGCTGT
TTCGGCTTCTTCGGCTTCTTGGCTTCCTTGTTACCGCGTAACTGGCCTTTTGCCATGGGATTCTCCTTGCAGTGCCTCAG
AAAGTATTCGGCTGGGTCTGTAAACGCAACTCAACCCAGACCGATCATAGGCCGATACGCCGAAATCGGTGGCTTTATTC
CATGA

Upstream 100 bases:

>100_bases
GCCCCTGCCCGTCAGCGATTTCATTCGTACGATTCCATCCCAAGCCTGGCGTCCTGCGCCGCCGTTACGCCGCCTCGATC
GAGCCGGCCGGAGCCCGCCA

Downstream 100 bases:

>100_bases
CCCGATGAATATCATGTGCATCTGAAAGAATCTCCCCCGGATCCCTCACCTGCCACACCGCCGAGGCATCTAGCCAGGAT
ATTTGACGATTGCATAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRFLAGAGALGGVINEPIGTTSC
FGFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPRPIIGRYAEIGGFIP

Sequences:

>Translated_134_residues
MSPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRFLAGAGALGGVINEPIGTTSC
FGFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPRPIIGRYAEIGGFIP
>Mature_133_residues
SPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRFLAGAGALGGVINEPIGTTSCF
GFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPRPIIGRYAEIGGFIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14161; Mature: 14030

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRF
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHH
LAGAGALGGVINEPIGTTSCFGFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPR
HHCCCHHCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
PIIGRYAEIGGFIP
CHHHHHHHHCCCCC
>Mature Secondary Structure 
SPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRF
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHH
LAGAGALGGVINEPIGTTSCFGFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPR
HHCCCHHCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
PIIGRYAEIGGFIP
CHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA