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The map label for this gene is lpsE [H]

Identifier: 74318157

GI number: 74318157

Start: 2224932

End: 2226026

Strand: Direct

Name: lpsE [H]

Synonym: Tbd_2139

Alternate gene names: 74318157

Gene position: 2224932-2226026 (Clockwise)

Preceding gene: 74318156

Following gene: 74318158

Centisome position: 76.46

GC content: 70.41

Gene sequence:

>1095_bases
TTGAGCGCGAACGACAGGCCGCGCAGCCTCCACGTCATCGGCGGCAAGCGGCTCGGCGGCGCCGAGCGCTTTTTCGTCCG
CCTGGTGAACGCGCTGGCGCGACGCGGTGAGCCGGTCGCGGCGGTGACCGTCGCCGGCGGCGAAATCGCGCGTGCGCTCG
ATCCCGCGGTACGGCAGTTCCATGCCCCGATGTTCGCGTTCTGGGACCGCTACTCGCGCTGGAAGATCGCGCGCGCGATT
GCAGCCTTCCATCCCGACGTCGTGCAGACCTACATGGGGCGCGCGACGCGCATCGTCCGCCTGCCTGTGGGCCGGGCGCC
CGTCCACCTCGCAAGGCTGGGCGGCTACTACCAGTTGAAGGGCTATCGCCACGCCCATGCCTGGGTCGGCAACACGCTCG
GCATTCGCGACTACCTGGCCGCCGGCAATCTGCCCGCCGGGCGCGTGCACTACATCGGCAACTTCGTCGACACGCCGGGC
CGCCTCAAGTCCGACGCAATCGACGCGCGGCGCCGGGCGCTTGGCCTCGAGGGTTGCCGCGTGCTCCTGGGACTCGGCCG
GCTGCATCCCAACAAGGGCTGGGCAGACCTGCTGCGCGCCTTCGCGCGCCTGCCGGCAACGCGCGGCGGCGCGCCGCTGC
ATCTGCTCATGGTCGGCGACGGCCCGCTGCGCGGGGAGCTGGAGGAACTCGCACGCAGCCTCGACATCGCGCCGCGTGTG
CACTGGACCGGCTGGCAGAACGACCCCGCCCCTTATTATCAATTGGCCGACGTCTTTGTCTGCGCGTCGGTTCACGAGCC
GCTCGGCAACGTCATCCTCGAAGCCTGGGCCAATCGTGTACCGCTAGTCTCGACCCGCGCTCAGGGTCCGCTCGAACTCG
TGCGCGACGGCGTGAACGGCCTGCTCGCGCCGCTCGGCGACCCAGCTGGCCTCGCCGACATTCTCGCTGCCGCACTCGCG
CTCGAGGGACCGGTGAGGTCGCGCCTCGTCGAGGCGGGCTACGACGAAGTGCACCGGCACTATTCCGAGCCAGCGATCGT
CGACGCGTACGTCGGGCTCTACACCGATCTGCGCCGCGGCGTTTCAGCCGCCTGA

Upstream 100 bases:

>100_bases
TGCTGCGCTTCGAAGCCGACAATACCCAGGCACTCGAGCGCATACAGGCCGACTTCCGGCGCGTCATCCACGAGGCCGCA
CCGTCGCTCAGCCTTCCGTT

Downstream 100 bases:

>100_bases
CACGGCGCGGCGCCACGGGCGCGCGATACGGCGTCTAGAATTCAGGCTCATCATCCTTAGGTGAGGAGTGCCATCATCGA
CTGCCTGCTCTTCCACGACG

Product: putative lipopolysaccharide core biosynthesis glycosyl transferase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSANDRPRSLHVIGGKRLGGAERFFVRLVNALARRGEPVAAVTVAGGEIARALDPAVRQFHAPMFAFWDRYSRWKIARAI
AAFHPDVVQTYMGRATRIVRLPVGRAPVHLARLGGYYQLKGYRHAHAWVGNTLGIRDYLAAGNLPAGRVHYIGNFVDTPG
RLKSDAIDARRRALGLEGCRVLLGLGRLHPNKGWADLLRAFARLPATRGGAPLHLLMVGDGPLRGELEELARSLDIAPRV
HWTGWQNDPAPYYQLADVFVCASVHEPLGNVILEAWANRVPLVSTRAQGPLELVRDGVNGLLAPLGDPAGLADILAAALA
LEGPVRSRLVEAGYDEVHRHYSEPAIVDAYVGLYTDLRRGVSAA

Sequences:

>Translated_364_residues
MSANDRPRSLHVIGGKRLGGAERFFVRLVNALARRGEPVAAVTVAGGEIARALDPAVRQFHAPMFAFWDRYSRWKIARAI
AAFHPDVVQTYMGRATRIVRLPVGRAPVHLARLGGYYQLKGYRHAHAWVGNTLGIRDYLAAGNLPAGRVHYIGNFVDTPG
RLKSDAIDARRRALGLEGCRVLLGLGRLHPNKGWADLLRAFARLPATRGGAPLHLLMVGDGPLRGELEELARSLDIAPRV
HWTGWQNDPAPYYQLADVFVCASVHEPLGNVILEAWANRVPLVSTRAQGPLELVRDGVNGLLAPLGDPAGLADILAAALA
LEGPVRSRLVEAGYDEVHRHYSEPAIVDAYVGLYTDLRRGVSAA
>Mature_363_residues
SANDRPRSLHVIGGKRLGGAERFFVRLVNALARRGEPVAAVTVAGGEIARALDPAVRQFHAPMFAFWDRYSRWKIARAIA
AFHPDVVQTYMGRATRIVRLPVGRAPVHLARLGGYYQLKGYRHAHAWVGNTLGIRDYLAAGNLPAGRVHYIGNFVDTPGR
LKSDAIDARRRALGLEGCRVLLGLGRLHPNKGWADLLRAFARLPATRGGAPLHLLMVGDGPLRGELEELARSLDIAPRVH
WTGWQNDPAPYYQLADVFVCASVHEPLGNVILEAWANRVPLVSTRAQGPLELVRDGVNGLLAPLGDPAGLADILAAALAL
EGPVRSRLVEAGYDEVHRHYSEPAIVDAYVGLYTDLRRGVSAA

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 39632; Mature: 39501

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANDRPRSLHVIGGKRLGGAERFFVRLVNALARRGEPVAAVTVAGGEIARALDPAVRQF
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH
HAPMFAFWDRYSRWKIARAIAAFHPDVVQTYMGRATRIVRLPVGRAPVHLARLGGYYQLK
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCEEEEC
GYRHAHAWVGNTLGIRDYLAAGNLPAGRVHYIGNFVDTPGRLKSDAIDARRRALGLEGCR
CCCHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHH
VLLGLGRLHPNKGWADLLRAFARLPATRGGAPLHLLMVGDGPLRGELEELARSLDIAPRV
HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCE
HWTGWQNDPAPYYQLADVFVCASVHEPLGNVILEAWANRVPLVSTRAQGPLELVRDGVNG
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH
LLAPLGDPAGLADILAAALALEGPVRSRLVEAGYDEVHRHYSEPAIVDAYVGLYTDLRRG
HHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHC
VSAA
CCCC
>Mature Secondary Structure 
SANDRPRSLHVIGGKRLGGAERFFVRLVNALARRGEPVAAVTVAGGEIARALDPAVRQF
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH
HAPMFAFWDRYSRWKIARAIAAFHPDVVQTYMGRATRIVRLPVGRAPVHLARLGGYYQLK
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCEEEEC
GYRHAHAWVGNTLGIRDYLAAGNLPAGRVHYIGNFVDTPGRLKSDAIDARRRALGLEGCR
CCCHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHH
VLLGLGRLHPNKGWADLLRAFARLPATRGGAPLHLLMVGDGPLRGELEELARSLDIAPRV
HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCE
HWTGWQNDPAPYYQLADVFVCASVHEPLGNVILEAWANRVPLVSTRAQGPLELVRDGVNG
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH
LLAPLGDPAGLADILAAALALEGPVRSRLVEAGYDEVHRHYSEPAIVDAYVGLYTDLRRG
HHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHC
VSAA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]