| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yccK [C]
Identifier: 74318149
GI number: 74318149
Start: 2218982
End: 2219314
Strand: Direct
Name: yccK [C]
Synonym: Tbd_2131
Alternate gene names: 74318149
Gene position: 2218982-2219314 (Clockwise)
Preceding gene: 74318148
Following gene: 74318150
Centisome position: 76.26
GC content: 64.56
Gene sequence:
>333_bases ATGCGCGTACACCAAGATTCAGCGGTCGCTGCCGTCTTCGACCCCGACGGCTTCCTGCTCGACCCAACGATGTGGAGCGA AAGTCTGGCCGACCGCATCGCCCAGACGGACGGAATCGGCGAGCTGAACGCCCAGCAATTGGGCCTGCTGCACACCCTGC GACGCGAATTTGCACGCAACGGCACGATCCCCGCGTTGAATCATGTCTGCCACGTCAGCGGCGAGGATGCCCAGTGTCTG CATCACCTGTTCCCGAGCCCGCGCGAGGCCTGGCGGGTTGCGGGCCTGCCGAATCCGGGCGAGGAGGCGAAGGCGTATTT TTCGGCACAGTGA
Upstream 100 bases:
>100_bases CCGAATTCGCATTGCGCGGTCTCAGCGACAGCCACGGCGCGATTCCGCGCCGTGAATGCGAATGCTATAAGTAGAAGTCT TTCCGACGCAGGAGGATGAA
Downstream 100 bases:
>100_bases GACAATGGCGGGATGAATCCTGCCATCAACGAAGCCGACGTCTGCCTGTTGCATGAACCGATCGTCGGCGCTTTCGGACT TCCCGGAGACTCGCCTTTCG
Product: putative dissimilatory sulfite reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARNGTIPALNHVCHVSGEDAQCL HHLFPSPREAWRVAGLPNPGEEAKAYFSAQ
Sequences:
>Translated_110_residues MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARNGTIPALNHVCHVSGEDAQCL HHLFPSPREAWRVAGLPNPGEEAKAYFSAQ >Mature_110_residues MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARNGTIPALNHVCHVSGEDAQCL HHLFPSPREAWRVAGLPNPGEEAKAYFSAQ
Specific function: Unknown
COG id: COG2920
COG function: function code P; Dissimilatory sulfite reductase (desulfoviridin), gamma subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12088; Mature: 12088
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARN CCCCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC GTIPALNHVCHVSGEDAQCLHHLFPSPREAWRVAGLPNPGEEAKAYFSAQ CCCCCHHHEECCCCCHHHHHHHHCCCHHHHEEECCCCCCCHHHCEECCCC >Mature Secondary Structure MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARN CCCCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC GTIPALNHVCHVSGEDAQCLHHLFPSPREAWRVAGLPNPGEEAKAYFSAQ CCCCCHHHEECCCCCHHHHHHHHCCCHHHHEEECCCCCCCHHHCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA