| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318147
Identifier: 74318147
GI number: 74318147
Start: 2215545
End: 2217779
Strand: Direct
Name: 74318147
Synonym: Tbd_2129
Alternate gene names: NA
Gene position: 2215545-2217779 (Clockwise)
Preceding gene: 74318138
Following gene: 74318148
Centisome position: 76.14
GC content: 66.35
Gene sequence:
>2235_bases ATGGAGCGCGAAATGCCAGACAAGTCAGTCGTAGTCAACCTCAACGAGTTCGAGCGGACCCGCCGAGTCCAGGTCTCGCC GGAAATCGTGTCGGCCCTGCACAACTGCCGCGATCTGCTGATCGAGGGCTCAACGCGCGTACTCACCCGCCAGAGCGAAG CGATGGAAAACGCATTGCTCGCGATGGCCGAGCGCGCACCGCTGCTCGAGACCCGCAATAGCTATTACGCCGCGCAGAGC ACGCTCAACAAGCGGGCGAACGAATTGCTCAGCGCCTGCAAGGACGCCTATTGCACGCGCTTCAACGACTTCGCCCATGC CAGGGATAAAGCCGCCGGCGCCGACATGCTCGAGCTGTCGCTGGTCGACGACCAGGACTTCGAAATCACGCTCGTCGTCG ACAAGGCGACCTCCCGCCTGCGCTACAACTGCGCCGAAGAACTCGTCGCCCTTGACGCGCGCATGGCGCACCTGATGGGC CGTTCCGACCTGTCCGAAAACGACAATCCGCTCGGCCCGCGCGCGCTGTGCGAGGCGCTGCTCGAGGGTATCGGTCGCGT CCAGTCCGAGCAGCACGTGAAGATTGTGCTGCTGAACCAGTTCGACCTCGCGCTGACAACGGAACTCGCGCACATTTATC AGTCGATCAATCGCGCGCTGATCGAGCGCGGTGTGCTCCCCGATCTCAAGGTCGGGGCCAAGAGCCGCGCGCAGCCGAGC GGAGCACAGGGCGCGCCCGCCTCGGGCGGCACGCCCCAGGCCGCGGGGGCGGACCCGGGCAGCGACATATTCCGTCTTTT CGAGCAACTCGCGGGTGGCGGCGGCCTCGTCCCCGGCGCTGCGGGCGGCTATCCCGGCGGCGGCGCCGGCCACGGATTCG GTGCGGGGTTCAGCCTCGTCGACTCGCTGGGCCAGCTGCAGACCGGAAGCATCCTGCTCCCGGACGGCGGCCGGTTCACG CTACCCCTCGCCGAAGCGGCGACGATCCAGAACGTTCTGCGCAGCCTGCAGCGCAGTCCCGTCATGCAGGCGGCAAGCCC GCTCGACGCCGTACTCGTCGACGCCGTGGCGATGCTCTTCGACGTCGTGTTCGACGAAGCCTCGGTCCCCGACCGCCTGA AGGCGCAGATCGCGCGCCTGCAGATCCCGGTACTGAAGGCGGCGATGCTCGATCGCAACTTCTTCTCGCAGCCGAACCAC CCGGTCCGCCGCATGCTCGACGCGATCGCGACCCTCGCCGTCCACCTGCCGGACAACGAGGCCGGTAATGCCCGCCTCGA CGCGATCTCGGAAGTGGTGAGCCGGGTCCTCGACGGCTTCGAGCAGGACGTCGCGATATTCGCTTTCGCCGCGACCCAGC TCGAAGCGATGGGTACCCTGCTCGACGACACGCTCGACCGTACGGCCGATGCCGGACTGCAGCACGAGATCGACGAGATC AAGCAGGCGGAGCGTGCTGAGCTCGCCCCGGTGATCGTGCACGACTTCATCAATCGCGCGCTCAAGGATCAGCCGGTCGC CGACACGATGCGCGAATTCCTGCGTCGTGACTGGGCCCAGTTGCTGACCCGCGACTACCTGCAGGAAGGCGAAACGGGGG CGCATTTCAACAGCCATGTCGAGACCATGCGGGAACTCGTCTGGAGCGTGCAGCCCAAGGCCGACATGGACGCCCGGCTC ATGCTCGTGCGCATCCTGCCCGGGCTGCTGAAGCGGCTGCGCGAGGGAGTCGCCGAAATCGACCTCCCGCAGAAGCTGTC CGATCATTTCTTCGCCACGCTGGTGATTCTTCATGCGAACGCGGTGCGGCCGAACGCACAGCCCGTCCCGCTGCCGGACA TCAGCCCGGAAGACATCGCAGAACTCACGCCCGCAGCCGAAGCCGCATGGAACGGCACCGCGTCGACTGCAGTCGGCAGC GACCTCGAGCCGACGGCGGTCGAGATCGAGGACGAATTCACGGCGCGGGCGCGCGCGCTCAACAAGGGCGACTGGGTGGA ATTCCACTACGACGACGGGACCTTCCGCTGGGCCCGCTTGGGCTGGATCAGCGGGGTCAAGAACACCTATCTCTTTTCCG ACCAGGACGGCATGAACAGCTTCTCGATCGGGCTGCACCGCCTGGCGGACAAGCTGCGCCGCGGCGAGGCGGTCCTGGTC GAACGGAAATCGATCACCGAGTCGGCCTTCGGCAAGCTCCTGAACCTGTTCCGGCAGAAGCTGGGCGTCGCCTGA
Upstream 100 bases:
>100_bases ACGGCGCCGACCCGAGGCGGCCGCCGGACCGGGCGGCAAAAGTAGCCGTACGCACAGCCCCGTTTCCGGTCGGCCCATCG CCGATACGCGAGGTGAACCC
Downstream 100 bases:
>100_bases GCCGCCGCGCCGAACACGACCCGCGGACCACGTGTTGCGCCGCGCGGGTGGTGTTACCCTGCGCGCGTGAATTCATTCGC CTCCCGCATTATCCAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 744; Mature: 744
Protein sequence:
>744_residues MEREMPDKSVVVNLNEFERTRRVQVSPEIVSALHNCRDLLIEGSTRVLTRQSEAMENALLAMAERAPLLETRNSYYAAQS TLNKRANELLSACKDAYCTRFNDFAHARDKAAGADMLELSLVDDQDFEITLVVDKATSRLRYNCAEELVALDARMAHLMG RSDLSENDNPLGPRALCEALLEGIGRVQSEQHVKIVLLNQFDLALTTELAHIYQSINRALIERGVLPDLKVGAKSRAQPS GAQGAPASGGTPQAAGADPGSDIFRLFEQLAGGGGLVPGAAGGYPGGGAGHGFGAGFSLVDSLGQLQTGSILLPDGGRFT LPLAEAATIQNVLRSLQRSPVMQAASPLDAVLVDAVAMLFDVVFDEASVPDRLKAQIARLQIPVLKAAMLDRNFFSQPNH PVRRMLDAIATLAVHLPDNEAGNARLDAISEVVSRVLDGFEQDVAIFAFAATQLEAMGTLLDDTLDRTADAGLQHEIDEI KQAERAELAPVIVHDFINRALKDQPVADTMREFLRRDWAQLLTRDYLQEGETGAHFNSHVETMRELVWSVQPKADMDARL MLVRILPGLLKRLREGVAEIDLPQKLSDHFFATLVILHANAVRPNAQPVPLPDISPEDIAELTPAAEAAWNGTASTAVGS DLEPTAVEIEDEFTARARALNKGDWVEFHYDDGTFRWARLGWISGVKNTYLFSDQDGMNSFSIGLHRLADKLRRGEAVLV ERKSITESAFGKLLNLFRQKLGVA
Sequences:
>Translated_744_residues MEREMPDKSVVVNLNEFERTRRVQVSPEIVSALHNCRDLLIEGSTRVLTRQSEAMENALLAMAERAPLLETRNSYYAAQS TLNKRANELLSACKDAYCTRFNDFAHARDKAAGADMLELSLVDDQDFEITLVVDKATSRLRYNCAEELVALDARMAHLMG RSDLSENDNPLGPRALCEALLEGIGRVQSEQHVKIVLLNQFDLALTTELAHIYQSINRALIERGVLPDLKVGAKSRAQPS GAQGAPASGGTPQAAGADPGSDIFRLFEQLAGGGGLVPGAAGGYPGGGAGHGFGAGFSLVDSLGQLQTGSILLPDGGRFT LPLAEAATIQNVLRSLQRSPVMQAASPLDAVLVDAVAMLFDVVFDEASVPDRLKAQIARLQIPVLKAAMLDRNFFSQPNH PVRRMLDAIATLAVHLPDNEAGNARLDAISEVVSRVLDGFEQDVAIFAFAATQLEAMGTLLDDTLDRTADAGLQHEIDEI KQAERAELAPVIVHDFINRALKDQPVADTMREFLRRDWAQLLTRDYLQEGETGAHFNSHVETMRELVWSVQPKADMDARL MLVRILPGLLKRLREGVAEIDLPQKLSDHFFATLVILHANAVRPNAQPVPLPDISPEDIAELTPAAEAAWNGTASTAVGS DLEPTAVEIEDEFTARARALNKGDWVEFHYDDGTFRWARLGWISGVKNTYLFSDQDGMNSFSIGLHRLADKLRRGEAVLV ERKSITESAFGKLLNLFRQKLGVA >Mature_744_residues MEREMPDKSVVVNLNEFERTRRVQVSPEIVSALHNCRDLLIEGSTRVLTRQSEAMENALLAMAERAPLLETRNSYYAAQS TLNKRANELLSACKDAYCTRFNDFAHARDKAAGADMLELSLVDDQDFEITLVVDKATSRLRYNCAEELVALDARMAHLMG RSDLSENDNPLGPRALCEALLEGIGRVQSEQHVKIVLLNQFDLALTTELAHIYQSINRALIERGVLPDLKVGAKSRAQPS GAQGAPASGGTPQAAGADPGSDIFRLFEQLAGGGGLVPGAAGGYPGGGAGHGFGAGFSLVDSLGQLQTGSILLPDGGRFT LPLAEAATIQNVLRSLQRSPVMQAASPLDAVLVDAVAMLFDVVFDEASVPDRLKAQIARLQIPVLKAAMLDRNFFSQPNH PVRRMLDAIATLAVHLPDNEAGNARLDAISEVVSRVLDGFEQDVAIFAFAATQLEAMGTLLDDTLDRTADAGLQHEIDEI KQAERAELAPVIVHDFINRALKDQPVADTMREFLRRDWAQLLTRDYLQEGETGAHFNSHVETMRELVWSVQPKADMDARL MLVRILPGLLKRLREGVAEIDLPQKLSDHFFATLVILHANAVRPNAQPVPLPDISPEDIAELTPAAEAAWNGTASTAVGS DLEPTAVEIEDEFTARARALNKGDWVEFHYDDGTFRWARLGWISGVKNTYLFSDQDGMNSFSIGLHRLADKLRRGEAVLV ERKSITESAFGKLLNLFRQKLGVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81237; Mature: 81237
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEREMPDKSVVVNLNEFERTRRVQVSPEIVSALHNCRDLLIEGSTRVLTRQSEAMENALL CCCCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AMAERAPLLETRNSYYAAQSTLNKRANELLSACKDAYCTRFNDFAHARDKAAGADMLELS HHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE LVDDQDFEITLVVDKATSRLRYNCAEELVALDARMAHLMGRSDLSENDNPLGPRALCEAL EECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LEGIGRVQSEQHVKIVLLNQFDLALTTELAHIYQSINRALIERGVLPDLKVGAKSRAQPS HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GAQGAPASGGTPQAAGADPGSDIFRLFEQLAGGGGLVPGAAGGYPGGGAGHGFGAGFSLV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH DSLGQLQTGSILLPDGGRFTLPLAEAATIQNVLRSLQRSPVMQAASPLDAVLVDAVAMLF HHHCCCCCCCEECCCCCEEEECHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHH DVVFDEASVPDRLKAQIARLQIPVLKAAMLDRNFFSQPNHPVRRMLDAIATLAVHLPDNE HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCC AGNARLDAISEVVSRVLDGFEQDVAIFAFAATQLEAMGTLLDDTLDRTADAGLQHEIDEI CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KQAERAELAPVIVHDFINRALKDQPVADTMREFLRRDWAQLLTRDYLQEGETGAHFNSHV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ETMRELVWSVQPKADMDARLMLVRILPGLLKRLREGVAEIDLPQKLSDHFFATLVILHAN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC AVRPNAQPVPLPDISPEDIAELTPAAEAAWNGTASTAVGSDLEPTAVEIEDEFTARARAL CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCHHCCCCCCCCCEEEECHHHHHHHHHC NKGDWVEFHYDDGTFRWARLGWISGVKNTYLFSDQDGMNSFSIGLHRLADKLRRGEAVLV CCCCEEEEEECCCCEEHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE ERKSITESAFGKLLNLFRQKLGVA EHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEREMPDKSVVVNLNEFERTRRVQVSPEIVSALHNCRDLLIEGSTRVLTRQSEAMENALL CCCCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AMAERAPLLETRNSYYAAQSTLNKRANELLSACKDAYCTRFNDFAHARDKAAGADMLELS HHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE LVDDQDFEITLVVDKATSRLRYNCAEELVALDARMAHLMGRSDLSENDNPLGPRALCEAL EECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LEGIGRVQSEQHVKIVLLNQFDLALTTELAHIYQSINRALIERGVLPDLKVGAKSRAQPS HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GAQGAPASGGTPQAAGADPGSDIFRLFEQLAGGGGLVPGAAGGYPGGGAGHGFGAGFSLV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH DSLGQLQTGSILLPDGGRFTLPLAEAATIQNVLRSLQRSPVMQAASPLDAVLVDAVAMLF HHHCCCCCCCEECCCCCEEEECHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHH DVVFDEASVPDRLKAQIARLQIPVLKAAMLDRNFFSQPNHPVRRMLDAIATLAVHLPDNE HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCC AGNARLDAISEVVSRVLDGFEQDVAIFAFAATQLEAMGTLLDDTLDRTADAGLQHEIDEI CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KQAERAELAPVIVHDFINRALKDQPVADTMREFLRRDWAQLLTRDYLQEGETGAHFNSHV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ETMRELVWSVQPKADMDARLMLVRILPGLLKRLREGVAEIDLPQKLSDHFFATLVILHAN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC AVRPNAQPVPLPDISPEDIAELTPAAEAAWNGTASTAVGSDLEPTAVEIEDEFTARARAL CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCHHCCCCCCCCCEEEECHHHHHHHHHC NKGDWVEFHYDDGTFRWARLGWISGVKNTYLFSDQDGMNSFSIGLHRLADKLRRGEAVLV CCCCEEEEEECCCCEEHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE ERKSITESAFGKLLNLFRQKLGVA EHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA