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The map label for this gene is rbgA [H]

Identifier: 74318138

GI number: 74318138

Start: 2208398

End: 2209312

Strand: Direct

Name: rbgA [H]

Synonym: Tbd_2120

Alternate gene names: 74318138

Gene position: 2208398-2209312 (Clockwise)

Preceding gene: 74318137

Following gene: 74318147

Centisome position: 75.89

GC content: 67.21

Gene sequence:

>915_bases
ATGGTGATCCAGTGGTTCCCGGGGCACATGACGACCGCCCGCAAGAAGGCGGCCGAAACGATGGCCCAGATCGACGTCGT
GGTCGAGGTGCTCGACGCCCGCCTGCCCGAAGCGGGCTGCAACCCGATGATCCACGAACTGCGCGCGCATCGGCAGCGGC
CCTGCCTCAAGGTGCTGAACAAGGTCGACCTCGCCGACCCCGCCGTCACGCGCGCCTGGCTCGATCACTACAACCGGCAG
CCCGGCGTGATGGCGGTGGCGATCTCGGCGAAGAAAGCGGCCGACGTGGCCAAGCTTTCCGCCCTTGCGCAGAAGCTCGC
ACCGCACCGCGACGACGCCTTCAAGCCGTTGCGGCTGATGATCATGGGCATCCCCAACGTCGGCAAATCGACGCTCATGA
ACACCTGGGTCAAGCGCCGCGTCGCGGCCGTCGGCGACGAGCCGGCAGTCACCAAATCGCAGCAGCGCATCAACCTGTCG
CCGCGCCTGATTCTGGTCGACACGCCGGGCATGACCTGGCCGAAGATCGAGCACGACGCCGACGGCTTCATGCTCGCGGC
GAGCCACGCGATTGGCCGCAACGCGGTTATCGACGAAGAGGTCGCGGTATTTCTCGCGGCCATCCTGCTCGAACGCTATC
CCGCGCTGTTGCGGGCGCGCTACGGCTTCGACGTCGAGGGACTCGATGCCACAGGGGTCGTCGAAGCGGTGGCGAAAAAA
CGCGGTTGTCTGCTCAAAGGCCGGGGCGGCGAACTCGACCTCGAGAAGGCCGCGATGATCCTGCTGACCGACTACCGCAG
CGGTGCGCTCGGCCGGATCAGCCTCGAGACGCCGGATTCACGCCGCGCGATGCTCGCTGGCGGAGCGCCGACGAACACCG
CTGGCGCGGAGAACGGCGCAGACCAATCGCCCTAG

Upstream 100 bases:

>100_bases
GCTGATGGATGCCGCCGAGTTCGACGCGCTCGTGCTCGCCGCGGCGCATGGCGTGGGTAGCGGGGGCGGGGGCGGCTGAG
CGCCGACGAGAGACCGCGAC

Downstream 100 bases:

>100_bases
GGTGCGGCAGCGCGATCGAGCCAGACCAGGGTTTCTGTGCGTGCGTGAATTGCCCCCACCGGAAGGCGCTCGCCATCGCG
CCAACGCCGCATCGCTTCGC

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MVIQWFPGHMTTARKKAAETMAQIDVVVEVLDARLPEAGCNPMIHELRAHRQRPCLKVLNKVDLADPAVTRAWLDHYNRQ
PGVMAVAISAKKAADVAKLSALAQKLAPHRDDAFKPLRLMIMGIPNVGKSTLMNTWVKRRVAAVGDEPAVTKSQQRINLS
PRLILVDTPGMTWPKIEHDADGFMLAASHAIGRNAVIDEEVAVFLAAILLERYPALLRARYGFDVEGLDATGVVEAVAKK
RGCLLKGRGGELDLEKAAMILLTDYRSGALGRISLETPDSRRAMLAGGAPTNTAGAENGADQSP

Sequences:

>Translated_304_residues
MVIQWFPGHMTTARKKAAETMAQIDVVVEVLDARLPEAGCNPMIHELRAHRQRPCLKVLNKVDLADPAVTRAWLDHYNRQ
PGVMAVAISAKKAADVAKLSALAQKLAPHRDDAFKPLRLMIMGIPNVGKSTLMNTWVKRRVAAVGDEPAVTKSQQRINLS
PRLILVDTPGMTWPKIEHDADGFMLAASHAIGRNAVIDEEVAVFLAAILLERYPALLRARYGFDVEGLDATGVVEAVAKK
RGCLLKGRGGELDLEKAAMILLTDYRSGALGRISLETPDSRRAMLAGGAPTNTAGAENGADQSP
>Mature_304_residues
MVIQWFPGHMTTARKKAAETMAQIDVVVEVLDARLPEAGCNPMIHELRAHRQRPCLKVLNKVDLADPAVTRAWLDHYNRQ
PGVMAVAISAKKAADVAKLSALAQKLAPHRDDAFKPLRLMIMGIPNVGKSTLMNTWVKRRVAAVGDEPAVTKSQQRINLS
PRLILVDTPGMTWPKIEHDADGFMLAASHAIGRNAVIDEEVAVFLAAILLERYPALLRARYGFDVEGLDATGVVEAVAKK
RGCLLKGRGGELDLEKAAMILLTDYRSGALGRISLETPDSRRAMLAGGAPTNTAGAENGADQSP

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=297, Percent_Identity=29.2929292929293, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI7019419, Length=249, Percent_Identity=28.5140562248996, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI296317324, Length=284, Percent_Identity=30.2816901408451, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI9506611, Length=284, Percent_Identity=30.2816901408451, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI45643129, Length=169, Percent_Identity=28.4023668639053, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI45643127, Length=169, Percent_Identity=28.4023668639053, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI45593130, Length=169, Percent_Identity=28.4023668639053, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193211047, Length=223, Percent_Identity=31.8385650224215, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32563985, Length=236, Percent_Identity=29.2372881355932, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71990926, Length=236, Percent_Identity=29.2372881355932, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI32563983, Length=236, Percent_Identity=29.2372881355932, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17534827, Length=272, Percent_Identity=25, Blast_Score=75, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6324381, Length=252, Percent_Identity=29.3650793650794, Blast_Score=89, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6320842, Length=279, Percent_Identity=28.3154121863799, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI85815858, Length=309, Percent_Identity=28.1553398058252, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI19922460, Length=253, Percent_Identity=29.2490118577075, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 32918; Mature: 32918

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIQWFPGHMTTARKKAAETMAQIDVVVEVLDARLPEAGCNPMIHELRAHRQRPCLKVLN
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
KVDLADPAVTRAWLDHYNRQPGVMAVAISAKKAADVAKLSALAQKLAPHRDDAFKPLRLM
HCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE
IMGIPNVGKSTLMNTWVKRRVAAVGDEPAVTKSQQRINLSPRLILVDTPGMTWPKIEHDA
EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCC
DGFMLAASHAIGRNAVIDEEVAVFLAAILLERYPALLRARYGFDVEGLDATGVVEAVAKK
CCEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RGCLLKGRGGELDLEKAAMILLTDYRSGALGRISLETPDSRRAMLAGGAPTNTAGAENGA
CCCEEECCCCCCCHHHCEEEEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCC
DQSP
CCCC
>Mature Secondary Structure
MVIQWFPGHMTTARKKAAETMAQIDVVVEVLDARLPEAGCNPMIHELRAHRQRPCLKVLN
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
KVDLADPAVTRAWLDHYNRQPGVMAVAISAKKAADVAKLSALAQKLAPHRDDAFKPLRLM
HCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE
IMGIPNVGKSTLMNTWVKRRVAAVGDEPAVTKSQQRINLSPRLILVDTPGMTWPKIEHDA
EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCC
DGFMLAASHAIGRNAVIDEEVAVFLAAILLERYPALLRARYGFDVEGLDATGVVEAVAKK
CCEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RGCLLKGRGGELDLEKAAMILLTDYRSGALGRISLETPDSRRAMLAGGAPTNTAGAENGA
CCCEEECCCCCCCHHHCEEEEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCC
DQSP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]