| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318134
Identifier: 74318134
GI number: 74318134
Start: 2204688
End: 2205950
Strand: Reverse
Name: 74318134
Synonym: Tbd_2116
Alternate gene names: NA
Gene position: 2205950-2204688 (Counterclockwise)
Preceding gene: 74318135
Following gene: 74318133
Centisome position: 75.81
GC content: 67.46
Gene sequence:
>1263_bases ATGAAGCGCGCGGCCTGGGTCGCGTTGTTGAGCGTCCTGCCGCTGACGGCGGTCGCTGAACCGCTGACGCTCGAGGCCGC GCTCGCTGCCGCCGCGGCACCGCATCCCGAGCGGCGCATCGCCGAAAGCGACCTCGCGCTTGCGCGGGCGGAGCGTCTGC AGGCCGCAAGCCGCAGGGATTTCAGCCTTTACCTCGATGGCGCGCTGCGTAGCGGACGCCGGCCCGATGACGGCTGGAAA CCCGACAATGCGCTGCGTCTCGTCGCGCGCAAGCCGGTCCTCGATTTCGGGCGCAGCAGCGACAGCATCACGGCCGCCGA GCGAGGCGTCGACGCGCGCGAGGCCGAGTTGCTCAGCACGCTGAGCGCGCGACGCGTCGACATCATGGCGCGTTACTTCG ACGTCCTGCTCGCCGACATGCAGTACGCCGCCGACAATGAATTCATGGCGGTCGCCTACGTGTCCTGGGACAACGCCAGC GACCGCTTCGAGGTCGGCGACATCAGCCAGCCGGAATTGCTGCGTCTGGAAGCCGACTATCAGGACATTCGCGAGCGCCG CAACGCGAGCATGCAGCGCATGCGCATGGCACGCCAACGGCTCGCTCACGCGATCAATCGACCCGCCGAGTTGCCGGATG AGCTTGTCGAACCTGTGCTGGCCGACAACCGGCGTGCGTTGCCCGAATTCGACCGGCTGCTGGCCTGGGTGATGGAAAAC AACCCGCGCCTGCGCGCGCTGAAGGCTGAAGTCGCCGCCGCCGAGGCGCGCATCGCGGCCGTGCGCAACGAACGCAATCC GACCCTCGACGTCGAGGTGGCGGGCGCCCGCTACAGCCGCGAATCGACGACGCGCGACGACGTCAGTGCCGGCCTCGTGT TCACCGTACCCTTCTATCAGGGCAGACGCGTCGACGCGCGCATAGCCCGCGAACTGGCGCAAAAGGAACGCAGCGCGGCC GAATTGGAGAAGCTCGGCCTCGAACTGAAGGACGCCGTTCTCGCGACGCTCCAGGAAATCGAATGGCTGCGGGGCAGTGC GCAGATCGCCGCCGATCGCCAGATCGAGTACCGCGATTGGGCGCTCGAGCGCGCACGGGCCGAATACGAGCTCGAACTGA AGACGAATCTGGGCACGAGCATGGCCGAGACGCAAGTCGCGCAACTGCGTCGCAAGCGGGTCGAGTATCAGCTTGCACTC GCACTGGCGCGGCTCGAGGCATTGTCCGGCGGCAACCTGCCGCCTACCGAGGGGGTACAGTAA
Upstream 100 bases:
>100_bases CGGGGCCGACCAAGGATAAAGCCGAGTTCCTGTTGCTCGCGCGTTACGTCGTCGACGGGGCCTACGCGAACCAGCCGTTC ACTCGCTACAAACAGGGCAA
Downstream 100 bases:
>100_bases TGAAGCAGCACACGGCGGGACGTACGCTCGCGGCTCTGGGGCTCGCCGCCCTGGCGCTGCCCGCGGCGGCGGCGAGCGTC GAACTCACGACGCGGGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRDFSLYLDGALRSGRRPDDGWK PDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLSTLSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNAS DRFEVGDISQPELLRLEADYQDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQGRRVDARIARELAQKERSAA ELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDWALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLAL ALARLEALSGGNLPPTEGVQ
Sequences:
>Translated_420_residues MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRDFSLYLDGALRSGRRPDDGWK PDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLSTLSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNAS DRFEVGDISQPELLRLEADYQDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQGRRVDARIARELAQKERSAA ELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDWALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLAL ALARLEALSGGNLPPTEGVQ >Mature_420_residues MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRDFSLYLDGALRSGRRPDDGWK PDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLSTLSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNAS DRFEVGDISQPELLRLEADYQDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQGRRVDARIARELAQKERSAA ELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDWALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLAL ALARLEALSGGNLPPTEGVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47081; Mature: 47081
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRD CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC FSLYLDGALRSGRRPDDGWKPDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLST CEEEEEHHHHCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCHHHHCCCCHHHHHHHHH LSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNASDRFEVGDISQPELLRLEADY HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEECCCCCCCCEEEEECCH QDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQ CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECCCC GRRVDARIARELAQKERSAAELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDW CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLALALARLEALSGGNLPPTEGVQ HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRD CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC FSLYLDGALRSGRRPDDGWKPDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLST CEEEEEHHHHCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCHHHHCCCCHHHHHHHHH LSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNASDRFEVGDISQPELLRLEADY HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEECCCCCCCCEEEEECCH QDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQ CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECCCC GRRVDARIARELAQKERSAAELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDW CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLALALARLEALSGGNLPPTEGVQ HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA