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The map label for this gene is secF [H]

Identifier: 74318098

GI number: 74318098

Start: 2173711

End: 2174643

Strand: Direct

Name: secF [H]

Synonym: Tbd_2080

Alternate gene names: 74318098

Gene position: 2173711-2174643 (Clockwise)

Preceding gene: 74318097

Following gene: 74318099

Centisome position: 74.7

GC content: 62.81

Gene sequence:

>933_bases
ATGCTGGAATTATTCCCGTTCAAGAAAACCATCCCCTTCATGAGTTGGGGGAAGGCGACGACGGCGATTTCGCTCCTGAC
TTTCCTGTTCGCGATTTGGGCGCTGTGGGATAAAGGCCTCAACCTCGGCGTCGACTTCACGGGCGGTACCGTGATCGAGA
TCACGACGAGTCATGCCGCCAACCTGCCCGAGATCCGCGGCGCACTCGAGAAGACCGGGCTGCCCGAAATCTCGGTGCAG
ACCTTCGGCACCAGCCGCGACGTCCTGATCCGCCTGCCCAACAAGGCGCACATCAACGCAGCGGAAACGAGCAACCGCGT
GCTCGCGGCGGTCAGAACCGTCGACCCAAGTGTGGAGTTGCGGCGCGTCGACTTCGTCGGCCCGCAGGTCGGCAAGGAAC
TGTACGACAGCGGCGCCCTCGCCCTGCTCGTCGTCGCCTTCGGCATCATGGCCTATCTGGCGATCCGCTTCGAGTGGCGC
TTCGCCGTCGCGGGCATGCTCGCGAACCTGCACGACATCGTCATCATCCTCGGCGTGTTCGCGTTCTTCCAGTGGGAATT
CACGCTGACCGTGCTCGCCGGCGTGCTCGCGGTCCTCGGCTACTCGGTCAACGAATCGGTCGTCGTCTTCGATCGCATCC
GCGAGAACATCCGCAAGATGCGCGGCGCGACGATCCCGCACATCATCGACGACGCGATCACCCGCACCATGAGCCGCACG
ATCATCACCCACGGCTCGACGCAGATCATGGTGCTGTCGATGCTGTTCTTCGGCGGCGAGGCGCTGCACAACTTCGCGCT
CGCGCTGACGATCGGCATCATGTTCGGCATCTACTCGTCCGTGCTCGTCGCCAGCCCGCTCCTGCTGATGTTCGGCGTCA
AGCGCGAGCACTTCATCAAGCCGGTCGAGAAGAAGGAAGAAGCGGTTGTCTAG

Upstream 100 bases:

>100_bases
ACCTCGATGTTCAGCGCGGTGACGGTGTCGCGGGCGATGGTCAACCTCACCTACGGCCGCCAGCCCCGTCTGGCCAAAGT
TTCGATCTAAGGGTTACGCG

Downstream 100 bases:

>100_bases
GGCCGGGATTCAGGGACTAGGATCTAGGGGTTAGGGAATGAGCGGCCGAAGGCCGCGAATTCTTCCTAGCCCCTAGCCCC
TAGCCCCTAGCCCCTAGCCC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MLELFPFKKTIPFMSWGKATTAISLLTFLFAIWALWDKGLNLGVDFTGGTVIEITTSHAANLPEIRGALEKTGLPEISVQ
TFGTSRDVLIRLPNKAHINAAETSNRVLAAVRTVDPSVELRRVDFVGPQVGKELYDSGALALLVVAFGIMAYLAIRFEWR
FAVAGMLANLHDIVIILGVFAFFQWEFTLTVLAGVLAVLGYSVNESVVVFDRIRENIRKMRGATIPHIIDDAITRTMSRT
IITHGSTQIMVLSMLFFGGEALHNFALALTIGIMFGIYSSVLVASPLLLMFGVKREHFIKPVEKKEEAVV

Sequences:

>Translated_310_residues
MLELFPFKKTIPFMSWGKATTAISLLTFLFAIWALWDKGLNLGVDFTGGTVIEITTSHAANLPEIRGALEKTGLPEISVQ
TFGTSRDVLIRLPNKAHINAAETSNRVLAAVRTVDPSVELRRVDFVGPQVGKELYDSGALALLVVAFGIMAYLAIRFEWR
FAVAGMLANLHDIVIILGVFAFFQWEFTLTVLAGVLAVLGYSVNESVVVFDRIRENIRKMRGATIPHIIDDAITRTMSRT
IITHGSTQIMVLSMLFFGGEALHNFALALTIGIMFGIYSSVLVASPLLLMFGVKREHFIKPVEKKEEAVV
>Mature_310_residues
MLELFPFKKTIPFMSWGKATTAISLLTFLFAIWALWDKGLNLGVDFTGGTVIEITTSHAANLPEIRGALEKTGLPEISVQ
TFGTSRDVLIRLPNKAHINAAETSNRVLAAVRTVDPSVELRRVDFVGPQVGKELYDSGALALLVVAFGIMAYLAIRFEWR
FAVAGMLANLHDIVIILGVFAFFQWEFTLTVLAGVLAVLGYSVNESVVVFDRIRENIRKMRGATIPHIIDDAITRTMSRT
IITHGSTQIMVLSMLFFGGEALHNFALALTIGIMFGIYSSVLVASPLLLMFGVKREHFIKPVEKKEEAVV

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=307, Percent_Identity=40.3908794788274, Blast_Score=237, Evalue=7e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34171; Mature: 34171

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELFPFKKTIPFMSWGKATTAISLLTFLFAIWALWDKGLNLGVDFTGGTVIEITTSHAA
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCC
NLPEIRGALEKTGLPEISVQTFGTSRDVLIRLPNKAHINAAETSNRVLAAVRTVDPSVEL
CCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCCCHHHCCCHHEEEEECCCCCCEE
RRVDFVGPQVGKELYDSGALALLVVAFGIMAYLAIRFEWRFAVAGMLANLHDIVIILGVF
EEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFFQWEFTLTVLAGVLAVLGYSVNESVVVFDRIRENIRKMRGATIPHIIDDAITRTMSRT
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IITHGSTQIMVLSMLFFGGEALHNFALALTIGIMFGIYSSVLVASPLLLMFGVKREHFIK
HHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PVEKKEEAVV
CHHHHCCCCC
>Mature Secondary Structure
MLELFPFKKTIPFMSWGKATTAISLLTFLFAIWALWDKGLNLGVDFTGGTVIEITTSHAA
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCC
NLPEIRGALEKTGLPEISVQTFGTSRDVLIRLPNKAHINAAETSNRVLAAVRTVDPSVEL
CCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCCCHHHCCCHHEEEEECCCCCCEE
RRVDFVGPQVGKELYDSGALALLVVAFGIMAYLAIRFEWRFAVAGMLANLHDIVIILGVF
EEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFFQWEFTLTVLAGVLAVLGYSVNESVVVFDRIRENIRKMRGATIPHIIDDAITRTMSRT
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IITHGSTQIMVLSMLFFGGEALHNFALALTIGIMFGIYSSVLVASPLLLMFGVKREHFIK
HHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PVEKKEEAVV
CHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]