| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is kup
Identifier: 74318083
GI number: 74318083
Start: 2157499
End: 2159373
Strand: Reverse
Name: kup
Synonym: Tbd_2065
Alternate gene names: 74318083
Gene position: 2159373-2157499 (Counterclockwise)
Preceding gene: 74318085
Following gene: 74318081
Centisome position: 74.21
GC content: 66.67
Gene sequence:
>1875_bases TTGAGCCAGCCTCACAGCGTCCCAAATACGCGTGCGCTCGCCCTCGGCGCGCTCGGCGTGGTGTTCGGCGACATCGGCAC CAGCCCCCTCTACACGATGAAGGAGGTGTTCGGCGGTCACCACCTCGCCCTGACCCAGGACAATGTGCTCGGCATCCTGT CGCTGATCTTCTGGGCCCTGATCCTGGTCGTGTCGCTCAAGTACGTCCTCGTCATCATGCGTGCGGACAACAAGGGCGAA GGCGGCATACTGGCGCTGCTGTCCCTGGTCCAGGGGCAGGCGCCGCTGCGCTCGAGAGCCCGCTGGATCATCATGTCGCT GGGTTTTCTCGGTGCGTCGCTGTTCTTCGGCGACAGTCTCATCACACCGGCGATCTCGGTGCTGTCGGCGGTCGAGGGGC TCGAGATCGGCGCGCCGGCCTTGCATCCCTTCATCCTTCCGCTCGCCCTCGGCATCCTCGTCGGCCTGTTTGCGATCCAG CGCCGCGGGACGGCAAGCATCGGGCGGCTGTTCGGGCCGATCATGCTGCTCTGGTTCGCGGTCCTCGGCGTGCTCGGTGC GATCGGCATTGCCAAACATCCCCAGGTGCTCGCGGCGCTGCTGCCGATTCATGCGATCCAGTTTTTCATGACCCACGGCA CGGCGGGTTTCCTGATCCTCGGTGCGGTGGTCCTCGCGATCACGGGCGCCGAGGCGCTCTATGCGGACATGGGCCATTTC GGCACGCGGCCGATCCGTCTGACGTGGTTCGGCTTCGTGCTGCCGGCGCTGGTCGTCAATTACTTCGGCCAGGGCGCGCT GCTGCTGGCCGAGCCCGCGGCCGTGCGCAATCCGTTCTACATGCTCGCGCCCGACTGGGCCTTGTACCCGATGGTCGCGC TGGCCACGGCGGCGACGGTGATCGCGTCCCAGGCGGTCATCTCGGGCGCCTTCTCGGTCACCCGGCAAGTGGTGCAGATG GGCTACGCTCCGCGGCTCGTGATCCGCCACACGTCGGCGACGGCGGCGGGGCAGATCTATATTCCCTTCGTCAACTGGAC GCTGGCGGCCGGCGTCGCGCTGCTCGTGCTCGGCTTTCAAAGCTCGAGCAATCTCGCCGCGGCCTACGGCATCGCCGTGA CGGCGACCTTCGCCATCGACACCGTCCTGCTCGCGCTGCTCATGCGCGTCAACTGGAACCTCGGGCGCGCGCCGACGCTG GTCGCAGCGGCGTTGTTTCTGACCCTCGATCTCGCGTTCTTCGGCGCGAATGCGGTGAAGATCCCCGAAGGCGGCTGGTT TCCGCTGGTCGTGGCGGTCGTCGTGTTCACGATCCTCGTGACCTGGAGACGGGGTCGCGAAATCGTCGGCGCGCGCCTGC ACGAGCGCGGGCTGCCCCTCGCGCCGTTCGTCGAATCGCTGCTGGCGCATCCTCCGGCGCGGGTCGGGGGCACGGCGGTG TTCATGACGACCGACCCGAGCGGTGTGCCCCTGGCGCTGCTGCACAACCTCAAGCACAACAAGGTTCTGCACGAGCGGGT GGTGATCCTCAACGTCCGTTATGGCGAGGTGCCCTACGTGCCGGCCGAGCACCGGCTCGCGGTGACGAAGCTCGGCGAGG GCGTGTTCCACGTCGTCGTGCGCTACGGTTTCATGGACGACGTCGACATTCCAAAGGCGCTGGCCGAATGCCCTTGCGGC ATGGATTTCGACATGATGGATACAACCTTCTTCCTGAGCCGGGAGAACCTGATTCCCGCGCGCGGCGACGGCGGGATGAT GGTGTGGCGCGAGCACCTGTTCGCAACGATGGCGCGCAACGCGGCAAGCCCGATGACCTTTTTCCGGATTCCGCCGAACC GCGTCGTCGAGCTCGGCGCGCAGCTCGAGATCTAG
Upstream 100 bases:
>100_bases CGTCATCGCTCGCATCCGAGGTCGTCGCGGGCGTATCATCTGCGACCGCCTGCCGCGCCGCGGCCGGCCAATCGATACAA CCCTACGACAAGCAAAGACA
Downstream 100 bases:
>100_bases GATGCACCACCCGCCGCGCGCCACCGGGGTGCGCAGCGACGGCGCGCCGAGGCTGCCTACGCCGCGCGCAGGCTCCGCCC GCGCGCCCGCTCGATCAGGT
Product: potassium uptake protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MSQPHSVPNTRALALGALGVVFGDIGTSPLYTMKEVFGGHHLALTQDNVLGILSLIFWALILVVSLKYVLVIMRADNKGE GGILALLSLVQGQAPLRSRARWIIMSLGFLGASLFFGDSLITPAISVLSAVEGLEIGAPALHPFILPLALGILVGLFAIQ RRGTASIGRLFGPIMLLWFAVLGVLGAIGIAKHPQVLAALLPIHAIQFFMTHGTAGFLILGAVVLAITGAEALYADMGHF GTRPIRLTWFGFVLPALVVNYFGQGALLLAEPAAVRNPFYMLAPDWALYPMVALATAATVIASQAVISGAFSVTRQVVQM GYAPRLVIRHTSATAAGQIYIPFVNWTLAAGVALLVLGFQSSSNLAAAYGIAVTATFAIDTVLLALLMRVNWNLGRAPTL VAAALFLTLDLAFFGANAVKIPEGGWFPLVVAVVVFTILVTWRRGREIVGARLHERGLPLAPFVESLLAHPPARVGGTAV FMTTDPSGVPLALLHNLKHNKVLHERVVILNVRYGEVPYVPAEHRLAVTKLGEGVFHVVVRYGFMDDVDIPKALAECPCG MDFDMMDTTFFLSRENLIPARGDGGMMVWREHLFATMARNAASPMTFFRIPPNRVVELGAQLEI
Sequences:
>Translated_624_residues MSQPHSVPNTRALALGALGVVFGDIGTSPLYTMKEVFGGHHLALTQDNVLGILSLIFWALILVVSLKYVLVIMRADNKGE GGILALLSLVQGQAPLRSRARWIIMSLGFLGASLFFGDSLITPAISVLSAVEGLEIGAPALHPFILPLALGILVGLFAIQ RRGTASIGRLFGPIMLLWFAVLGVLGAIGIAKHPQVLAALLPIHAIQFFMTHGTAGFLILGAVVLAITGAEALYADMGHF GTRPIRLTWFGFVLPALVVNYFGQGALLLAEPAAVRNPFYMLAPDWALYPMVALATAATVIASQAVISGAFSVTRQVVQM GYAPRLVIRHTSATAAGQIYIPFVNWTLAAGVALLVLGFQSSSNLAAAYGIAVTATFAIDTVLLALLMRVNWNLGRAPTL VAAALFLTLDLAFFGANAVKIPEGGWFPLVVAVVVFTILVTWRRGREIVGARLHERGLPLAPFVESLLAHPPARVGGTAV FMTTDPSGVPLALLHNLKHNKVLHERVVILNVRYGEVPYVPAEHRLAVTKLGEGVFHVVVRYGFMDDVDIPKALAECPCG MDFDMMDTTFFLSRENLIPARGDGGMMVWREHLFATMARNAASPMTFFRIPPNRVVELGAQLEI >Mature_623_residues SQPHSVPNTRALALGALGVVFGDIGTSPLYTMKEVFGGHHLALTQDNVLGILSLIFWALILVVSLKYVLVIMRADNKGEG GILALLSLVQGQAPLRSRARWIIMSLGFLGASLFFGDSLITPAISVLSAVEGLEIGAPALHPFILPLALGILVGLFAIQR RGTASIGRLFGPIMLLWFAVLGVLGAIGIAKHPQVLAALLPIHAIQFFMTHGTAGFLILGAVVLAITGAEALYADMGHFG TRPIRLTWFGFVLPALVVNYFGQGALLLAEPAAVRNPFYMLAPDWALYPMVALATAATVIASQAVISGAFSVTRQVVQMG YAPRLVIRHTSATAAGQIYIPFVNWTLAAGVALLVLGFQSSSNLAAAYGIAVTATFAIDTVLLALLMRVNWNLGRAPTLV AAALFLTLDLAFFGANAVKIPEGGWFPLVVAVVVFTILVTWRRGREIVGARLHERGLPLAPFVESLLAHPPARVGGTAVF MTTDPSGVPLALLHNLKHNKVLHERVVILNVRYGEVPYVPAEHRLAVTKLGEGVFHVVVRYGFMDDVDIPKALAECPCGM DFDMMDTTFFLSRENLIPARGDGGMMVWREHLFATMARNAASPMTFFRIPPNRVVELGAQLEI
Specific function: Transport of potassium into the cell
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family
Homologues:
Organism=Escherichia coli, GI48994960, Length=625, Percent_Identity=49.28, Blast_Score=591, Evalue=1e-170,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KUP_THIDA (Q3SH71)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315823.1 - STRING: Q3SH71 - GeneID: 3672236 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_2065 - NMPDR: fig|292415.3.peg.2221 - eggNOG: COG3158 - HOGENOM: HBG351154 - OMA: KECFSPE - PhylomeDB: Q3SH71 - BioCyc: TDEN292415:TBD_2065-MONOMER - HAMAP: MF_01522 - InterPro: IPR003855 - InterPro: IPR023051
Pfam domain/function: PF02705 K_trans
EC number: NA
Molecular weight: Translated: 66903; Mature: 66772
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c84c5d4)-; HASH(0x1bebd838)-; HASH(0x1d272e28)-; HASH(0x1d7985e0)-; HASH(0x1d7e605c)-; HASH(0x1cc30814)-; HASH(0x1cd3567c)-; HASH(0x1d6b4988)-; HASH(0x1d65f13c)-; HASH(0x1d59547c)-; HASH(0x1cd284ec)-; HASH(0x1b158a1c)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPHSVPNTRALALGALGVVFGDIGTSPLYTMKEVFGGHHLALTQDNVLGILSLIFWAL CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH ILVVSLKYVLVIMRADNKGEGGILALLSLVQGQAPLRSRARWIIMSLGFLGASLFFGDSL HHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH ITPAISVLSAVEGLEIGAPALHPFILPLALGILVGLFAIQRRGTASIGRLFGPIMLLWFA HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VLGVLGAIGIAKHPQVLAALLPIHAIQFFMTHGTAGFLILGAVVLAITGAEALYADMGHF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCC GTRPIRLTWFGFVLPALVVNYFGQGALLLAEPAAVRNPFYMLAPDWALYPMVALATAATV CCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCEEEECCCHHHHHHHHHHHHHHH IASQAVISGAFSVTRQVVQMGYAPRLVIRHTSATAAGQIYIPFVNWTLAAGVALLVLGFQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHEECC SSSNLAAAYGIAVTATFAIDTVLLALLMRVNWNLGRAPTLVAAALFLTLDLAFFGANAVK CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE IPEGGWFPLVVAVVVFTILVTWRRGREIVGARLHERGLPLAPFVESLLAHPPARVGGTAV CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEE FMTTDPSGVPLALLHNLKHNKVLHERVVILNVRYGEVPYVPAEHRLAVTKLGEGVFHVVV EEEECCCCCHHHHHHCCHHHHHHHCEEEEEEEEECCCCCCCCCCCEEHHHHCCHHHHHHH RYGFMDDVDIPKALAECPCGMDFDMMDTTFFLSRENLIPARGDGGMMVWREHLFATMARN HHCCCCCCCHHHHHHHCCCCCCCCHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC AASPMTFFRIPPNRVVELGAQLEI CCCCCEEEECCCHHHHHCCCCCCH >Mature Secondary Structure SQPHSVPNTRALALGALGVVFGDIGTSPLYTMKEVFGGHHLALTQDNVLGILSLIFWAL CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH ILVVSLKYVLVIMRADNKGEGGILALLSLVQGQAPLRSRARWIIMSLGFLGASLFFGDSL HHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH ITPAISVLSAVEGLEIGAPALHPFILPLALGILVGLFAIQRRGTASIGRLFGPIMLLWFA HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VLGVLGAIGIAKHPQVLAALLPIHAIQFFMTHGTAGFLILGAVVLAITGAEALYADMGHF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCC GTRPIRLTWFGFVLPALVVNYFGQGALLLAEPAAVRNPFYMLAPDWALYPMVALATAATV CCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCEEEECCCHHHHHHHHHHHHHHH IASQAVISGAFSVTRQVVQMGYAPRLVIRHTSATAAGQIYIPFVNWTLAAGVALLVLGFQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHEECC SSSNLAAAYGIAVTATFAIDTVLLALLMRVNWNLGRAPTLVAAALFLTLDLAFFGANAVK CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE IPEGGWFPLVVAVVVFTILVTWRRGREIVGARLHERGLPLAPFVESLLAHPPARVGGTAV CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEE FMTTDPSGVPLALLHNLKHNKVLHERVVILNVRYGEVPYVPAEHRLAVTKLGEGVFHVVV EEEECCCCCHHHHHHCCHHHHHHHCEEEEEEEEECCCCCCCCCCCEEHHHHCCHHHHHHH RYGFMDDVDIPKALAECPCGMDFDMMDTTFFLSRENLIPARGDGGMMVWREHLFATMARN HHCCCCCCCHHHHHHHCCCCCCCCHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC AASPMTFFRIPPNRVVELGAQLEI CCCCCEEEECCCHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA