| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is pgi2 [H]
Identifier: 74318081
GI number: 74318081
Start: 2154354
End: 2156036
Strand: Reverse
Name: pgi2 [H]
Synonym: Tbd_2063
Alternate gene names: 74318081
Gene position: 2156036-2154354 (Counterclockwise)
Preceding gene: 74318083
Following gene: 74318080
Centisome position: 74.1
GC content: 64.53
Gene sequence:
>1683_bases ATGGTTTCATCAGTACTTGTGCGCACCGGCGACACGAGGACGTCGGGGCTTTCGACGCGCCCCGTCCATCGGCTGCTGCA GGCGCATCATTCGCGCATGGCCGACGTGCATATGCGCGAACTCTTCGATACCGACCCGCAGCGTTTCGAGCGTTTTTCGC TGCAGGTCGGCGATCTCCTGCTCGACTACTCGAAGAACCGGATCACCGACGAGACGATGGATCTTCTCGTGCGGATGGCC GAGGAGTCGGACGTCGCCGGCTGGCGCGAGCGCATGTTTCGCGGCGACAAGATCAACACGACCGAGAATCGGGCCGTGCT GCACGTCGCGCTGCGCAACCGCAGCAACCGTCCGGTGAACGTCGACGGCGAGGACGTCATGCCCAAGGTCAACGCGGTCA TCGAGCGCATGGGCGCCTTCGCCGAGCAGGTCAGAGGCGGAGTCTGGCGCGGCTACAGCGGCGCGCTGATCACCGACGTC GTGAACATCGGCATCGGCGGCTCCGACCTCGGCCCGCAGATGGTCGTGCAGGCGCTCAAGCCCTACCGCCATCCCCGTTT GAAGCTGCACTTCATTTCCAACGTCGACGGCGCCCACGTCAAGGAGACGCTCGAGGCGCTCGACCCCGAGACGACGCTCT TCATCGTCTCGTCGAAGACCTTCACCACCCAGGAGACGATGACCAACGCGCATTACGCGCGCGACTGGTTTCTCGCCCGC GCCGGCGACGTCGCGCATGTCGCACGGCACTTTGTCGCGGTGTCGACCAATCGCGACGCGGTCACGGCCTTCGGCATCGA CGCCGCCAACATGTTCGAATTCTGGGACTGGGTCGGTGGGCGCTATTCGCTGTGGTCGGCGATCGGCCTGTCGATCGTCC TCGCCGTCGGCGCCGAGCGCTTCCTCGAACTGCTCGAAGGCGCGCACGAGATGGATGAGCATTTCCGCCACGCGCCGCTG CGGCAGAACATGCCCGTGATCCTGGCGCTGCTGGGCATCTGGTACAACAATTTCTTCGGCGCCGAGTCTCACGCGATCCT GCCTTACGACCATTATTTGCGCAGCCTGCCCGCCTATCTCGAGCAGGCCGACATGGAATCGAACGGGAAGTCGGTCGACC GCGACGGACGCGTCGTCGACTACCCGACCGGGCAGATCATCTGGGGCGCGACCGGCATCAACGGGCAGCATGCCTTCTAC CAGTTGCTGCACCAGGGCACGAAGATGATTCCGGCCGACTTCATCGTGTCGATCACGCCGCATACCGAACTGCAGGAGCA CCACGACATCCTGATCGCCAATTTCCTCGCGCAGACCGAGGCGCTCATGCGCGGGCGCACGCGCGAGGAGACGCTGGAGG AAATGGGTCGCAGCCCCGGCGACCCGTCGGTCCAGCACCGCGTGTTCGAGGGCAATCATCCGAGCAACGCGATCCTGCTG AAGAAGCTGACGCCGCACACGTTGGGCATGTTGATCGCGCTGTACGAACACAAGATCTTCGTCGAGGGCGTAATCTGGAA CCTCAACTCCTACGACCAGTGGGGGGTGGAACTCGGCAAGCAGCTCGCAGGGCGGATCCTGCCGGAGCTGCACGCCGACG CGCCCGTCGCGGGACACGACGCCTCGACCAACGCGCTGATCAACCACTACCGTCGCATGACGCAGCCGCATCCCGGGCTC TGA
Upstream 100 bases:
>100_bases GATGCGGGAACGGCGTTTGCTGGCAAGGGTCGAAGGCCTGCGGGCGGCAATCCGGGAGGGATCGGGCCCGCAGGCCGGTG ATTTGAGAAAGGGAAAACGC
Downstream 100 bases:
>100_bases GCGGCATGGAGTGGATCGCAGGCGACATCGGAGGAACGAAGAGCTGGCTCGTGTGGATCGGGCCGCCTGGCGACGGCCTG CACCCGCGCTTCGAGCGCGT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI 2; Phosphoglucose isomerase 2; PGI 2; Phosphohexose isomerase 2; PHI 2 [H]
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MVSSVLVRTGDTRTSGLSTRPVHRLLQAHHSRMADVHMRELFDTDPQRFERFSLQVGDLLLDYSKNRITDETMDLLVRMA EESDVAGWRERMFRGDKINTTENRAVLHVALRNRSNRPVNVDGEDVMPKVNAVIERMGAFAEQVRGGVWRGYSGALITDV VNIGIGGSDLGPQMVVQALKPYRHPRLKLHFISNVDGAHVKETLEALDPETTLFIVSSKTFTTQETMTNAHYARDWFLAR AGDVAHVARHFVAVSTNRDAVTAFGIDAANMFEFWDWVGGRYSLWSAIGLSIVLAVGAERFLELLEGAHEMDEHFRHAPL RQNMPVILALLGIWYNNFFGAESHAILPYDHYLRSLPAYLEQADMESNGKSVDRDGRVVDYPTGQIIWGATGINGQHAFY QLLHQGTKMIPADFIVSITPHTELQEHHDILIANFLAQTEALMRGRTREETLEEMGRSPGDPSVQHRVFEGNHPSNAILL KKLTPHTLGMLIALYEHKIFVEGVIWNLNSYDQWGVELGKQLAGRILPELHADAPVAGHDASTNALINHYRRMTQPHPGL
Sequences:
>Translated_560_residues MVSSVLVRTGDTRTSGLSTRPVHRLLQAHHSRMADVHMRELFDTDPQRFERFSLQVGDLLLDYSKNRITDETMDLLVRMA EESDVAGWRERMFRGDKINTTENRAVLHVALRNRSNRPVNVDGEDVMPKVNAVIERMGAFAEQVRGGVWRGYSGALITDV VNIGIGGSDLGPQMVVQALKPYRHPRLKLHFISNVDGAHVKETLEALDPETTLFIVSSKTFTTQETMTNAHYARDWFLAR AGDVAHVARHFVAVSTNRDAVTAFGIDAANMFEFWDWVGGRYSLWSAIGLSIVLAVGAERFLELLEGAHEMDEHFRHAPL RQNMPVILALLGIWYNNFFGAESHAILPYDHYLRSLPAYLEQADMESNGKSVDRDGRVVDYPTGQIIWGATGINGQHAFY QLLHQGTKMIPADFIVSITPHTELQEHHDILIANFLAQTEALMRGRTREETLEEMGRSPGDPSVQHRVFEGNHPSNAILL KKLTPHTLGMLIALYEHKIFVEGVIWNLNSYDQWGVELGKQLAGRILPELHADAPVAGHDASTNALINHYRRMTQPHPGL >Mature_560_residues MVSSVLVRTGDTRTSGLSTRPVHRLLQAHHSRMADVHMRELFDTDPQRFERFSLQVGDLLLDYSKNRITDETMDLLVRMA EESDVAGWRERMFRGDKINTTENRAVLHVALRNRSNRPVNVDGEDVMPKVNAVIERMGAFAEQVRGGVWRGYSGALITDV VNIGIGGSDLGPQMVVQALKPYRHPRLKLHFISNVDGAHVKETLEALDPETTLFIVSSKTFTTQETMTNAHYARDWFLAR AGDVAHVARHFVAVSTNRDAVTAFGIDAANMFEFWDWVGGRYSLWSAIGLSIVLAVGAERFLELLEGAHEMDEHFRHAPL RQNMPVILALLGIWYNNFFGAESHAILPYDHYLRSLPAYLEQADMESNGKSVDRDGRVVDYPTGQIIWGATGINGQHAFY QLLHQGTKMIPADFIVSITPHTELQEHHDILIANFLAQTEALMRGRTREETLEEMGRSPGDPSVQHRVFEGNHPSNAILL KKLTPHTLGMLIALYEHKIFVEGVIWNLNSYDQWGVELGKQLAGRILPELHADAPVAGHDASTNALINHYRRMTQPHPGL
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=541, Percent_Identity=58.2255083179298, Blast_Score=664, Evalue=0.0, Organism=Homo sapiens, GI296080693, Length=541, Percent_Identity=54.5286506469501, Blast_Score=605, Evalue=1e-173, Organism=Escherichia coli, GI1790457, Length=532, Percent_Identity=62.9699248120301, Blast_Score=706, Evalue=0.0, Organism=Caenorhabditis elegans, GI71996708, Length=560, Percent_Identity=56.0714285714286, Blast_Score=636, Evalue=0.0, Organism=Caenorhabditis elegans, GI71996703, Length=525, Percent_Identity=59.0476190476191, Blast_Score=635, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319673, Length=537, Percent_Identity=51.7690875232775, Blast_Score=588, Evalue=1e-169, Organism=Drosophila melanogaster, GI24651916, Length=541, Percent_Identity=56.9316081330869, Blast_Score=631, Evalue=0.0, Organism=Drosophila melanogaster, GI24651914, Length=541, Percent_Identity=56.9316081330869, Blast_Score=631, Evalue=0.0, Organism=Drosophila melanogaster, GI17737445, Length=541, Percent_Identity=56.9316081330869, Blast_Score=631, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 62973; Mature: 62973
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2 ; PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSVLVRTGDTRTSGLSTRPVHRLLQAHHSRMADVHMRELFDTDPQRFERFSLQVGDLL CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LDYSKNRITDETMDLLVRMAEESDVAGWRERMFRGDKINTTENRAVLHVALRNRSNRPVN HHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCC VDGEDVMPKVNAVIERMGAFAEQVRGGVWRGYSGALITDVVNIGIGGSDLGPQMVVQALK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH PYRHPRLKLHFISNVDGAHVKETLEALDPETTLFIVSSKTFTTQETMTNAHYARDWFLAR HCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHC AGDVAHVARHFVAVSTNRDAVTAFGIDAANMFEFWDWVGGRYSLWSAIGLSIVLAVGAER CCCHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FLELLEGAHEMDEHFRHAPLRQNMPVILALLGIWYNNFFGAESHAILPYDHYLRSLPAYL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHH EQADMESNGKSVDRDGRVVDYPTGQIIWGATGINGQHAFYQLLHQGTKMIPADFIVSITP HHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECC HTELQEHHDILIANFLAQTEALMRGRTREETLEEMGRSPGDPSVQHRVFEGNHPSNAILL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHEEEECCCCCCCEEEE KKLTPHTLGMLIALYEHKIFVEGVIWNLNSYDQWGVELGKQLAGRILPELHADAPVAGHD ECCCHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ASTNALINHYRRMTQPHPGL CCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVSSVLVRTGDTRTSGLSTRPVHRLLQAHHSRMADVHMRELFDTDPQRFERFSLQVGDLL CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LDYSKNRITDETMDLLVRMAEESDVAGWRERMFRGDKINTTENRAVLHVALRNRSNRPVN HHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCC VDGEDVMPKVNAVIERMGAFAEQVRGGVWRGYSGALITDVVNIGIGGSDLGPQMVVQALK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH PYRHPRLKLHFISNVDGAHVKETLEALDPETTLFIVSSKTFTTQETMTNAHYARDWFLAR HCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHC AGDVAHVARHFVAVSTNRDAVTAFGIDAANMFEFWDWVGGRYSLWSAIGLSIVLAVGAER CCCHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FLELLEGAHEMDEHFRHAPLRQNMPVILALLGIWYNNFFGAESHAILPYDHYLRSLPAYL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHH EQADMESNGKSVDRDGRVVDYPTGQIIWGATGINGQHAFYQLLHQGTKMIPADFIVSITP HHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECC HTELQEHHDILIANFLAQTEALMRGRTREETLEEMGRSPGDPSVQHRVFEGNHPSNAILL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHEEEECCCCCCCEEEE KKLTPHTLGMLIALYEHKIFVEGVIWNLNSYDQWGVELGKQLAGRILPELHADAPVAGHD ECCCHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ASTNALINHYRRMTQPHPGL CCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA