Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is glgA [H]

Identifier: 74318075

GI number: 74318075

Start: 2145151

End: 2146647

Strand: Reverse

Name: glgA [H]

Synonym: Tbd_2057

Alternate gene names: 74318075

Gene position: 2146647-2145151 (Counterclockwise)

Preceding gene: 74318076

Following gene: 74318074

Centisome position: 73.77

GC content: 68.74

Gene sequence:

>1497_bases
ATGAAACGCGGAGCAATGAAGGTGCTGTTCGTCGCGAGCGAGGCCTTTCCCCTGGTCAAGACGGGCGGACTCGGCGACGT
CCTGCACGGACTTCCCCAGGCCTTGCACGGCCTCGGCGTCGGCGTCCGACTCCTGCTGCCCGGCTATCGTACGCTCCTGC
GCCAGCTCGACCAGGTGCGGATAGTCGCCTGGTTCGACGTGCGCGGGGCGGAGGGGCCGGTCGCCGCGCGCGTGCTCGAG
ACGCGTCATCCGGGGTTCGATTTCCCGCTGTGGATCGTCGATTGCCCGCCGCTGTTCGATCGCCCGGGCAATCCTTACGT
CGACGTCACGGGCTATGACTGGCCCGACAATGCCGAGCGTTTCGCGGTGTTCGCGCGCGTCGCCGCGCTGCTCGCACAGG
ATGCCCACGAGGCCGGCTGGCTGCCGGACGTCGTGCACACCCACGACTGGCAGACCGGACTCGTGCCGGCTTTCCTCGCC
GACCTGCCGGCACGTCCGCGGACGGTGTTCACGATCCACAACCTCGCCTACGGCGGCCACTTCCCGCACGGCGACTTCCT
GCGCCTGCAACTGCCGGCGCATTGGTGGTCGCACGAGGGCGTCGAGTTTCACGGCGGCTTTTCGATGCTGAAGGCGGGCA
TCGTCTACGCCGACGCGGTCACCACCGTAAGCCCGACCTATGCCGAGGAAATCTGCACGCCGGCCTTCGGCTACGGACTC
GACGGCCTGCTGCGCTCGCGCCGCCACAAGCTGCACGGAATTCTCAACGGCATCGATAGCGCGACCTGGGACCCGGCTGA
CGACCCGCATCTACGCGCGCGCTACACCGCGGGACGCATTCTGCCGGGCAAGCGGCGCGACAAGCAGGCGCTGCTCGAAC
GTTTTCTGCCGGCGGCCGACGAAGCCGCGCTGCAGGCGCCGCTCGTCGGCCTGGTCGGCCGCCTCGTCGAGCAGAAGGGC
ATCGACTGGGTGCTCGCGGCGATGCCGCTGCTGCTCGCCGAAACCGATGCGCGTTTCGTGTTGCTCGGCAGCGGCCAGGC
CGCCTACGAGCAGAGGCTCACCCGGCTGGCCCGCCAGCACCCGACGCGCGTCTTCGTCGAGATCGGCTACGACGAGGCGC
TGGCGCACCAGATCGAGGCCGGCGCCGACATGTTCCTGATGCCGTCGCGCTTCGAACCCTGCGGCCTGAACCAGATGTAC
AGCCTGCGTTACGGCACCTTGCCGATCGTGTTCAAGACGGGCGGCCTCGCCGACACCATCGTCGACACCAACGAAGCGAG
CCTGGCGGACGGCAGCGCGAATGGCTTCGTCTTCGACACGCCGGACGTGGCGCATTTCGTCGACGCGGTCCGCCGCGCGC
TTGCCCTCTACCGTCAGCCCTCGCTGTGGCGCCGCGTGCAGCAGACCGGAATGCGCCTGTCCTTCGACTGGCGGGAAAGC
GCCGGCCACTACCTCGCGCTCTACGCGGCCGATTCCGCCGGAGAACCCGATGTCTGA

Upstream 100 bases:

>100_bases
GTCGATCGAAGTGACGCTGCCGCCGCTCGGGGCGATTTTCCTCAAGCCCTGTCCCTGAAGGGGACGCAGATGGATTCGAC
AAGAACGACGGGAAATAACA

Downstream 100 bases:

>100_bases
GCCGAATGCCGATTTCGTTCCCCTGCTCGCGCTCGAGCCGCTGCCGACGAGCGGCCGGGTCCTCACGCAGGACCTCGAGC
GCTACCAGTTCTACCATCTC

Product: glycogen/starch synthase, ADP-glucose type

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase [H]

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVRIVAWFDVRGAEGPVAARVLE
TRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAERFAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLA
DLPARPRTVFTIHNLAYGGHFPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL
DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAADEAALQAPLVGLVGRLVEQKG
IDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMY
SLRYGTLPIVFKTGGLADTIVDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES
AGHYLALYAADSAGEPDV

Sequences:

>Translated_498_residues
MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVRIVAWFDVRGAEGPVAARVLE
TRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAERFAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLA
DLPARPRTVFTIHNLAYGGHFPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL
DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAADEAALQAPLVGLVGRLVEQKG
IDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMY
SLRYGTLPIVFKTGGLADTIVDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES
AGHYLALYAADSAGEPDV
>Mature_498_residues
MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVRIVAWFDVRGAEGPVAARVLE
TRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAERFAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLA
DLPARPRTVFTIHNLAYGGHFPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL
DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAADEAALQAPLVGLVGRLVEQKG
IDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMY
SLRYGTLPIVFKTGGLADTIVDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES
AGHYLALYAADSAGEPDV

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=485, Percent_Identity=43.5051546391753, Blast_Score=378, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 54945; Mature: 54945

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVR
CCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHCCEE
IVAWFDVRGAEGPVAARVLETRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAER
EEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCEEEECCCCCCCCHHH
FAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLADLPARPRTVFTIHNLAYGGH
HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCC
FPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL
CCCCCEEEEEECCHHCCCCCEEECCCHHHHHHHHHEECHHHCCCCHHHHHHCCCHHCCCH
DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAAD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCC
EAALQAPLVGLVGRLVEQKGIDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHC
PTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTI
CCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECCCCCHHE
VDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES
ECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHCC
AGHYLALYAADSAGEPDV
CCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVR
CCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHCCEE
IVAWFDVRGAEGPVAARVLETRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAER
EEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCEEEECCCCCCCCHHH
FAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLADLPARPRTVFTIHNLAYGGH
HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCC
FPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL
CCCCCEEEEEECCHHCCCCCEEECCCHHHHHHHHHEECHHHCCCCHHHHHHCCCHHCCCH
DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAAD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCC
EAALQAPLVGLVGRLVEQKGIDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHC
PTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTI
CCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECCCCCHHE
VDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES
ECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHCC
AGHYLALYAADSAGEPDV
CCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA