| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is dgk [H]
Identifier: 74318070
GI number: 74318070
Start: 2139898
End: 2140539
Strand: Direct
Name: dgk [H]
Synonym: Tbd_2052
Alternate gene names: 74318070
Gene position: 2139898-2140539 (Clockwise)
Preceding gene: 74318069
Following gene: 74318071
Centisome position: 73.54
GC content: 64.49
Gene sequence:
>642_bases ATGACGTCATCCCGCTACCGTTACATCGTCGTCGAAGGCCCGATCGGCGCCGGCAAGACCAGTCTCACGCACAAGCTGGC CGAACGTCTCGGCGCCGACCTGCTGCTCGAGAACGCGGGCGACAACCCTTTCCTGCCGCGCTTCTATCAGGAACCGCGCC GTTACGCGCTGCCGACGCAGCTGCATTTCCTGTTCGACCGCTCGCGCCAGTTGCGTGATCTTGGCCAGGGCGACCTGTTC CGCAGCGGAACGGTGTCGGACTTCCTGATCGACAAGGACATGCTGTTCGCGCGCCTGAATCTCGACGACGACGAGTTCGA GCTCTACCAGAAGGTCTACGCCGACCTCGCGCCGCAGGCGGCGACGCCCGATCTCGTGATCTACCTGCAGGCGCCGACGG AGACGCTGCACGAGCGCGTCCGTCGCCGCGGGATCGATTTCGAGCGCGGCATGGACGCGGCGTATCTGGAGCGGCTCGCC AACAGCTACAGCGAATTCTTCCATCGCTACGACGCGGCGCCGCTTCTGATCGTCAACACCAGCCACCTCAACTTCGCGCA GAACGAGGCCGATTTCGAGCTGCTGCTCGAACGCATGAACAAGATGCGCGGACCGCGCGAGTTCTTCAGCCGGGCCGCGT GA
Upstream 100 bases:
>100_bases AGACCGTGATTCCCGGACGCGGGCCGGCGGAGGACTGGCTTGCCGCAGCGAGCGGGCAGAACGTCGCCCTGCTTCCCCCT TCCCCTGCCGCCGCTCACGC
Downstream 100 bases:
>100_bases CATGCCGGTGACGCTCTCGACGCTAAAAGCGCTGCGGCAGAAGGGCGAGAAGATCGCCGTGCTCACGTGCTACGACGCGA GCTTCGCGCGCGTGTTCGAC
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTSSRYRYIVVEGPIGAGKTSLTHKLAERLGADLLLENAGDNPFLPRFYQEPRRYALPTQLHFLFDRSRQLRDLGQGDLF RSGTVSDFLIDKDMLFARLNLDDDEFELYQKVYADLAPQAATPDLVIYLQAPTETLHERVRRRGIDFERGMDAAYLERLA NSYSEFFHRYDAAPLLIVNTSHLNFAQNEADFELLLERMNKMRGPREFFSRAA
Sequences:
>Translated_213_residues MTSSRYRYIVVEGPIGAGKTSLTHKLAERLGADLLLENAGDNPFLPRFYQEPRRYALPTQLHFLFDRSRQLRDLGQGDLF RSGTVSDFLIDKDMLFARLNLDDDEFELYQKVYADLAPQAATPDLVIYLQAPTETLHERVRRRGIDFERGMDAAYLERLA NSYSEFFHRYDAAPLLIVNTSHLNFAQNEADFELLLERMNKMRGPREFFSRAA >Mature_212_residues TSSRYRYIVVEGPIGAGKTSLTHKLAERLGADLLLENAGDNPFLPRFYQEPRRYALPTQLHFLFDRSRQLRDLGQGDLFR SGTVSDFLIDKDMLFARLNLDDDEFELYQKVYADLAPQAATPDLVIYLQAPTETLHERVRRRGIDFERGMDAAYLERLAN SYSEFFHRYDAAPLLIVNTSHLNFAQNEADFELLLERMNKMRGPREFFSRAA
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 24676; Mature: 24545
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSRYRYIVVEGPIGAGKTSLTHKLAERLGADLLLENAGDNPFLPRFYQEPRRYALPTQ CCCCCEEEEEEECCCCCCHHHHHHHHHHHHCHHEEEECCCCCCCCCHHHHCCHHCCCCHH LHFLFDRSRQLRDLGQGDLFRSGTVSDFLIDKDMLFARLNLDDDEFELYQKVYADLAPQA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCC ATPDLVIYLQAPTETLHERVRRRGIDFERGMDAAYLERLANSYSEFFHRYDAAPLLIVNT CCCCEEEEEECCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC SHLNFAQNEADFELLLERMNKMRGPREFFSRAA CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure TSSRYRYIVVEGPIGAGKTSLTHKLAERLGADLLLENAGDNPFLPRFYQEPRRYALPTQ CCCCEEEEEEECCCCCCHHHHHHHHHHHHCHHEEEECCCCCCCCCHHHHCCHHCCCCHH LHFLFDRSRQLRDLGQGDLFRSGTVSDFLIDKDMLFARLNLDDDEFELYQKVYADLAPQA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCC ATPDLVIYLQAPTETLHERVRRRGIDFERGMDAAYLERLANSYSEFFHRYDAAPLLIVNT CCCCEEEEEECCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC SHLNFAQNEADFELLLERMNKMRGPREFFSRAA CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]