Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318059

Identifier: 74318059

GI number: 74318059

Start: 2129486

End: 2130340

Strand: Reverse

Name: 74318059

Synonym: Tbd_2041

Alternate gene names: NA

Gene position: 2130340-2129486 (Counterclockwise)

Preceding gene: 74318060

Following gene: 74318058

Centisome position: 73.21

GC content: 70.41

Gene sequence:

>855_bases
GTGAGAACCGCCGTCCTGGCCGGCGTGCTTGCCGTGCTGCAAGGCTGTGCCCTGACCGTCAGCGATCCGCGTGCGCGGGC
GCCGATCGAGGGCTTCGTGCAGTCGGAGGCCGATGCGCGCGTCTGGGTCGAGCCTGGCTTCGAGGCCTACGGCGCGCGCG
TGGCGGCGGCTCTGCCGGCCGCGGTCGCGGCAGTCGAGGCGGCTCACTACCGGCGCTTCGCCCGCGCCCTGCGCGTCCAC
GTCTGCGGCAGCGAGGCCTGCTTCGGGCGTTACGTGCTGACGCCGAAGCTCTCGGCGGCCGTCGTTCCCGACAACCGCCT
CTTCCTCTCGCCCAAGCTCGATGGCCGCGAAAAGCACCGGCTCGCCGGGCTCCTGACCCATGAACTCGCGCATCTCCATC
TCGGCCAGCGCATCGGCTACTACCACAGCACCGTGCCCGTCTGGTTCCACGAAGGCTGGGCGTCGTTGACCGCCCACGGT
GGCGGCGCCGAATACGCGAGCGACGCGCAGGTCCGCGCTGCAATCGGGGCGGGCCGCCGCATCGAAGTCGGCGCGCGCGA
CACGCGCGACAGGCGGCATCGCGCTGCGGCCGCCGGCCTCGATCCCTACGGCTTCTATCGCCAGTCGATGATGCTCGTCG
GCTGGCTCAAGGCGCAGGACGAAAGCCGCTTTCGCGAACTGGTGCTGTCCGTGCAGAATGACGAGGATTTCGAAATCGCG
TTCTGGAACGTCTATGGACAGTCGCCCGCGACGCGCCTCGCCGGGTTTTTCGACGGCGCACCGCCCGCCGTACCGGCGGT
CGCCGGCGGGTCGATCCAGGCCGCCTCCGCCAACCCCAATCCAGGTTCTCCATGA

Upstream 100 bases:

>100_bases
ACCTCGGCTACTGGATCGGCGAGAGCCGCAAGATGGCGTACAAGAAACAGTATCCGCCGCTGCAGGGCTTGGTCGACGGC
AGCTGGCAGGCCCTCGAGGC

Downstream 100 bases:

>100_bases
AACCCTATCTCGACCTGATGCGCCACGTGCTTGAGCACGGCACACGCAAAGACGACCGCACCGGCACCGGCACCCTGTCG
GTCTTCGGCTGGCAGACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPAAVAAVEAAHYRRFARALRVH
VCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHRLAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHG
GGAEYASDAQVRAAIGAGRRIEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA
FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP

Sequences:

>Translated_284_residues
MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPAAVAAVEAAHYRRFARALRVH
VCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHRLAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHG
GGAEYASDAQVRAAIGAGRRIEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA
FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP
>Mature_284_residues
MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPAAVAAVEAAHYRRFARALRVH
VCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHRLAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHG
GGAEYASDAQVRAAIGAGRRIEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA
FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30510; Mature: 30510

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPA
CCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH
AVAAVEAAHYRRFARALRVHVCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHR
HHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCEEECCCCEEEECCCCCCCHHHH
LAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHGGGAEYASDAQVRAAIGAGRR
HHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHCCCCE
IEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA
EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE
FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP
EEEEECCCHHHHHHHHCCCCCCCCCEECCCCEEECCCCCCCCCC
>Mature Secondary Structure
MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPA
CCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH
AVAAVEAAHYRRFARALRVHVCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHR
HHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCEEECCCCEEEECCCCCCCHHHH
LAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHGGGAEYASDAQVRAAIGAGRR
HHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHCCCCE
IEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA
EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE
FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP
EEEEECCCHHHHHHHHCCCCCCCCCEECCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA