Click here to switch to the map view.

The map label for this gene is nsrR [H]

Identifier: 74318032

GI number: 74318032

Start: 2104399

End: 2104869

Strand: Reverse

Name: nsrR [H]

Synonym: Tbd_2014

Alternate gene names: 74318032

Gene position: 2104869-2104399 (Counterclockwise)

Preceding gene: 74318042

Following gene: 74318027

Centisome position: 72.34

GC content: 62.63

Gene sequence:

>471_bases
ATGAGACTCACGACCTATACCGACTACGCCCTTCGTACGCTGATGTATCTCGCCACCCATCGCGATCGCCTGGTCACGAT
TTCCGAGATCGCCGAGGTCCACGGGATTTCCAAGAACCATTTGATGAAAGTGGTGTACCAGCTTGGCCTGTCGGGACTCG
TCGATACACTGCGCGGCCGCAACGGCGGCTTGCGTCTCAAGCGCGAGCCCACGGAGATCACGGTCGGCGAGGTCGTGCGC
AGCACCGAGACCGACTTCGACATGGCCGAGTGTTTCGACCCCTCGGGCGACCGGTGTCTGTATTCGCCGGCCTGCGTGCT
CAAGGACGTGCTGAGTTCGGCGACGCTTGCCTACCTCGGCGTCCTCGACAAGGTGACGCTCGGGGATCTCGTCGGAGGGG
GGCGCGGCAGGAAAAAGACCGCGCCGATCCAGGTCTATCCGGCTGCCAAGAAGCCTAAAGTCGCGGCCTGA

Upstream 100 bases:

>100_bases
CACGGGCAGGGTCGCTGACGCGAGCCTTTAACCTATATAATGGATGAATGATTTGTTGCCGATCCGCAGGATTCGGCAGC
CCCTGCCGCAGGACGCCGCC

Downstream 100 bases:

>100_bases
AGCGGCGCCGCGCGGCCGTTTCAGCCGAGCGTGCTGCCGCTCGCCCAGAAGTCGTAGCCTTTGCTCAGAAACTCGTCCCA
CGGCAGGTAGTGCGAGCCGT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRLTTYTDYALRTLMYLATHRDRLVTISEIAEVHGISKNHLMKVVYQLGLSGLVDTLRGRNGGLRLKREPTEITVGEVVR
STETDFDMAECFDPSGDRCLYSPACVLKDVLSSATLAYLGVLDKVTLGDLVGGGRGRKKTAPIQVYPAAKKPKVAA

Sequences:

>Translated_156_residues
MRLTTYTDYALRTLMYLATHRDRLVTISEIAEVHGISKNHLMKVVYQLGLSGLVDTLRGRNGGLRLKREPTEITVGEVVR
STETDFDMAECFDPSGDRCLYSPACVLKDVLSSATLAYLGVLDKVTLGDLVGGGRGRKKTAPIQVYPAAKKPKVAA
>Mature_156_residues
MRLTTYTDYALRTLMYLATHRDRLVTISEIAEVHGISKNHLMKVVYQLGLSGLVDTLRGRNGGLRLKREPTEITVGEVVR
STETDFDMAECFDPSGDRCLYSPACVLKDVLSSATLAYLGVLDKVTLGDLVGGGRGRKKTAPIQVYPAAKKPKVAA

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=132, Percent_Identity=43.1818181818182, Blast_Score=112, Evalue=9e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17058; Mature: 17058

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTYTDYALRTLMYLATHRDRLVTISEIAEVHGISKNHLMKVVYQLGLSGLVDTLRGR
CCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCC
NGGLRLKREPTEITVGEVVRSTETDFDMAECFDPSGDRCLYSPACVLKDVLSSATLAYLG
CCCEEEECCCCEEHHHHHHHHCCCCCCHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHH
VLDKVTLGDLVGGGRGRKKTAPIQVYPAAKKPKVAA
HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MRLTTYTDYALRTLMYLATHRDRLVTISEIAEVHGISKNHLMKVVYQLGLSGLVDTLRGR
CCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCC
NGGLRLKREPTEITVGEVVRSTETDFDMAECFDPSGDRCLYSPACVLKDVLSSATLAYLG
CCCEEEECCCCEEHHHHHHHHCCCCCCHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHH
VLDKVTLGDLVGGGRGRKKTAPIQVYPAAKKPKVAA
HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA